BAC Information

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BAC

Clone NameB6Ng01-076A05
Chromosome10 (Build37)
Map Location 54,919,816 - 54,920,943
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041898, LOC382460
Downstream geneLOC100041927, D630037F22Rik, 1700060H10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076A05.bB6Ng01-076A05.g
ACCDH892405DH892406
length1,1271,243
definitionDH892405|Mus musculus domesticus DNA, BAC clone: B6Ng01-076A05, 5' end.DH892406|Mus musculus domesticus DNA, BAC clone: B6Ng01-076A05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgtccaatccctgtgttttaattgtaagaacacattagccat
gagataaaatccctaagagtttcctctaattaagaatttacccttcacag
cactctgaacattttcagaggtaaacagttttgtaaactttttatcataa
tggctcagcttttccagtgccacagaatactacaaaaagcctcactagaa
aaattaggttgataatatggaaatctacatttttattcaataaaagaaag
atgttttctaaagtataactcttacccaggtatgttggtggtatgtgaat
gaaatcttatcattagggaggcactggcaggagaactgttgtaaattcaa
cacagagtcacctaagttacaaaggccaccctacaggagactaaaactga
aacataaggaaaacagtaaagtcaaaacaaaggaaaataacagaaaagcc
agcaaacaaattaacaaaaagaaagaatactaataagttatcagggaaac
gtttagactgaatcagaaacaacagaactgtcattctttttatttaaatc
tttagagttcctttctaataactgattaattctataatactccttagtta
aaactaactttttgtgttttaggcttcttttctccttataaaatgtgaca
ggtaacatttctatttctatcatgttaaaattcctcctaccctaaattta
gaatagttccattttggggaaatgtcaaaatttaaactaaaggagactta
taaccttggttcacaaattatcagtttcgttaatgactcctgctgggact
gaagattaccaggcaggcttcagattcaaaatgggtatttcctaattatc
cttcagttcaacatggatagaccatgaagctgcatgtccacacctagaca
cttatccaccagaacaaaatacagttatgtaaaaaaataggcttatttgt
atcttagcttagctaagcttgaatgtgtgttactctgtaagaagcaaact
ttcaaatacagcatcaaacaacacctaaccgaacataagctccacaaagc
ttcagaattttatttcccccccagctactttttagttaatgttaaagaat
ttcttggccaggcagtgggtgggcgca
gaattcttacaaggagggctagctaaaactaagggccagttgagggatat
tatataagcctaatacaatagaagcttgcaaaatacatgaatatatgaag
gtgatctgctgggtcaggcatggccttggttgggacggaatgacattgtt
cttacccctgggacaggaccaggcttgcatgagtgttgatagctgctgtg
ggcatagtgcttgttggtataaggcacatattttatgtccctctttcaag
ggatgtcctcccagttaatattaatgactgcatgataaccaaagacagca
ggagtctgggaggggaagggtaggctaatgtctcaacaaaatggtaaatg
ctaggaccttcaggataacctttaaggatatgaaaaagacctctaaaaac
ataggttcaaaaatatataatttttcaaaaaataagaaagcaataagaat
tacatgaggggcttcatgaatctaaaggaacgagtgttgcagaagttttt
aatccagatgcagagtttttaccatgcctttgatcatttagttccttgat
aaaagaaagacacatttatatttacaataagcctcatacagcacaagagt
tgtgtagatatctaccctctatgctattagaatctattttactatcaata
acccagagttatttcttactatatttcatctgggctctaaactccaattg
gctagccctcaggaccatgttctcttgaactcacctaacccatggcactt
ctcctccatttaccatcttcttctcttagttctccatcgtcaaagcctgg
gaaaactaaaccccacctatgtctcttctacctagctattagctgctggc
atctttatttaacactaagaaataacttggaggcagagtcaatgggtcta
tgtgcagactccacatcttggggccctcacttaccaagaacaaacacaac
acaaaagtaactgtgccatgatccatcttgtcagaaagaaacaaaagaaa
gatttaaagaagatttagggagtagtgatcataatttccaccaagctaga
tatttttgtctatggatcaaagcagacagatttattaattcaaggtcagc
ctgttaacgagcacagttagccacgaagtgataagaaatgtaattcagaa
tggtccccccaagcatctcttatgtcatgctgctcaagcaggctgaccct
cgtatcctcctgcatgttaaaaataatagtggtgctatgagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_54919816_54920943
seq2: B6Ng01-076A05.b_45_1171

seq1  GAATTCCATGTCCAATCCCTGTGTTTTAATTGTAAGAACACATTAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTCCAATCCCTGTGTTTTAATTGTAAGAACACATTAGCCAT  50

seq1  GAGATAAAATCCCTAAGAGTTTCCTCTAATTAAGAATTTACCCTTCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAAAATCCCTAAGAGTTTCCTCTAATTAAGAATTTACCCTTCACAG  100

seq1  CACTCTGAACATTTTCAGAGGTAAACAGTTTTGTAAACTTTTTATCATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGAACATTTTCAGAGGTAAACAGTTTTGTAAACTTTTTATCATAA  150

seq1  TGGCTCAGCTTTTCCAGTGCCACAGAATACTACAAAAAGCCTCACTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAGCTTTTCCAGTGCCACAGAATACTACAAAAAGCCTCACTAGAA  200

seq1  AAATTAGGTTGATAATATGGAAATCTACATTTTTATTCAATAAAAGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGGTTGATAATATGGAAATCTACATTTTTATTCAATAAAAGAAAG  250

seq1  ATGTTTTCTAAAGTATAACTCTTACCCAGGTATGTTGGTGGTATGTGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCTAAAGTATAACTCTTACCCAGGTATGTTGGTGGTATGTGAAT  300

seq1  GAAATCTTATCATTAGGGAGGCACTGGCAGGAGAACTGTTGTAAATTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTTATCATTAGGGAGGCACTGGCAGGAGAACTGTTGTAAATTCAA  350

seq1  CACAGAGTCACCTAAGTTACAAAGGCCACCCTACAGGAGACTAAAACTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGTCACCTAAGTTACAAAGGCCACCCTACAGGAGACTAAAACTGA  400

seq1  AACATAAGGAAAACAGTAAAGTCAAAACAAAGGAAAATAACAGAAAAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAGGAAAACAGTAAAGTCAAAACAAAGGAAAATAACAGAAAAGCC  450

seq1  AGCAAACAAATTAACAAAAAGAAAGAATACTAATAAGTTATCAGGGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACAAATTAACAAAAAGAAAGAATACTAATAAGTTATCAGGGAAAC  500

seq1  GTTTAGACTGAATCAGAAACAACAGAACTGTCATTCTTTTTATTTAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGACTGAATCAGAAACAACAGAACTGTCATTCTTTTTATTTAAATC  550

seq1  TTTAGAGTTCCTTTCTAATAACTGATTAATTCTATAATACTCCTTAGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGTTCCTTTCTAATAACTGATTAATTCTATAATACTCCTTAGTTA  600

seq1  AAACTAACTTTTTGTGTTTTAGGCTTCTTTTCTCCTTATAAAATGTGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAACTTTTTGTGTTTTAGGCTTCTTTTCTCCTTATAAAATGTGACA  650

seq1  GGTAACATTTCTATTTCTATCATGTTAAAATTCCTCCTACCCTAAATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACATTTCTATTTCTATCATGTTAAAATTCCTCCTACCCTAAATTTA  700

seq1  GAATAGTTCCATTTTGGGGAAATGTCAAAATTTAAACTAAAGGAGACTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGTTCCATTTTGGGGAAATGTCAAAATTTAAACTAAAGGAGACTTA  750

seq1  TAACCTTGGTTCACAAATTATCAGTTTCGTTAATGACTCCTGCTGGGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTGGTTCACAAATTATCAGTTTCGTTAATGACTCCTGCTGGGACT  800

seq1  GAAGATTACCAGGCAGGCTTCAGATTCAAAATGGGTATTTCCTAATTATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTACCAGGCAGGCTTCAGATTCAAAATGGGTATTTCCTAATTATC  850

seq1  CTTCAGTTCAACATGGATAGACCATGAAGCTGCATGTCCACACCTAGACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTTCAACATGGATAGACCATGAAGCTGCATGTCCACACCTAGACA  900

seq1  CTTATCCACCAGAACAAAATACAGTTATGTAAAAAAAATAGGCTTATTTG  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTTATCCACCAGAACAAAATACAGTTATGT-AAAAAAATAGGCTTATTTG  949

seq1  TATCTTAGCTTAGCTAAGCTTGAATGTGTGTTACTCTGTAAGAAGCAAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTAGCTTAGCTAAGCTTGAATGTGTGTTACTCTGTAAGAAGCAAAC  999

seq1  TTTCAAATACAGCATCAAACAACACCTAACCGAACATAAGCT-CACAAAG  1049
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTCAAATACAGCATCAAACAACACCTAACCGAACATAAGCTCCACAAAG  1049

seq1  CTTTCAGAAATTTTTATTTCCACCCCAGCTACTTTTTAGTTAATGTTAAA  1099
      | |||||||  |||||||||| ||||||||||||||||||||||||||||
seq2  C-TTCAGAA--TTTTATTTCCCCCCCAGCTACTTTTTAGTTAATGTTAAA  1096

seq1  GAATTTTCTGGCCAGGCAGTGG--TGGCGCA  1128
      ||||||  ||||||||||||||   ||||||
seq2  GAATTTCTTGGCCAGGCAGTGGGTGGGCGCA  1127