BAC Information

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BAC

Clone NameB6Ng01-076I15
Chromosome10 (Build37)
Map Location 58,883,249 - 59,025,579
singlet/doubletdoublet
Overlap genePla2g12b, Oit3, Ccdc109a
Upstream geneLims1, Ranbp2, 6230424H07Rik, LOC100038981, Edar, LOC624335, LOC100039099, Sh3md4, Sept10, Ankrd57, LOC664892, P4ha1, LOC100039174
Downstream geneLOC100039225, Cbara1, EG664907, LOC664936, Dnajb12, Ddit4, D10Ertd641e, Ascc1, Spock2, Chst3, LOC100039080, Psap, Cdh23, 4632428N05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076I15.bB6Ng01-076I15.g
ACCDH892780DH892781
length925694
definitionDH892780|Mus musculus domesticus DNA, BAC clone: B6Ng01-076I15, 5' end.DH892781|Mus musculus domesticus DNA, BAC clone: B6Ng01-076I15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,883,249 - 58,884,168)(59,024,884 - 59,025,579)
sequence
gaattcttaggataagccctacttgatcatgggtaggagtctaattgact
agcatctgctgaagatgttgcatttagtcacgagagatatctatcagtgg
ctttctgtctctctggtttctctgtctgattttattatcagaacactact
gaccacatacaacgggatagatatagtcctaggttttggaagcatttaga
agggattgctatgaatagcaaatatttcttgaagccatacggcaatggat
ctttttggggatgcactttttagtgactagtcatctgttttcatttttga
tttcattgagtcagttcagtggagaacttatatttcctccaggttgttta
gacgttctggcgtgtccatggtatctgttatacaagtgaaccaaagtctt
tccctgcctcatcttccctcagagtcccttcacccaagggacaggaacct
ttccgtgagttccctcccagccaccttgtggttcctgtcaccatggtgta
gtataattagcaattgtcccatttgttcgctccatctcttggtccaaact
aggaggtccttgagttgggatgatgtgttttgtttgtttaatctctggtg
ccctgcttatctctcatacacatctcccctttcatcagtaaataactgtg
caccccatggtttgatcagagaaacatggcagtatagtctaaacgagtat
ttctgaaatcacgatagcgtgggatttctaaatgactttctccctggagg
tgccacaaaaactgagatgccagcaagtgtatctgctttattggactggg
gggtggggagcttctctgaaagtgcctcacttgaaggtatgctgttcttt
taactctattctcctgtctctgccagccctctgctcatcacctgtaaata
cccctgcctcacccgctcctggggt
gaattctaacgcaggcattgagggagccaagtagcatgtagtgaggtaat
gtagagactaacaacaggaagtcgccaccttcacctcttccagctggaga
aacacaggaaggggggagcaaggaggttgcacatggagcccagcacttca
gagaggaaggacgttatttgattgggtaagggcaagtacaatatgctcca
cctccctccctcccccaaagtacagaaaactgtagaaactgctatttctg
aatatgagttttgcacattttctctgaggtgccagccttcatgtcggtgc
taaaggataaaagtaggggaaaatacactaaaaattagaatagcagcacg
cgcgcacacacacacacacacacacacacacacacacacgcacacacaca
cacacatttctgaagagagggtaataatgtatgctttgctggtaaaagta
gtctgaagagatcatgagacctttaaagagacctctgcgtccacagatgt
gggtgtgtactagtacacagagaggtgacacacaaagtctgtccacctgg
tgaaactgaagcatctttgtgaaatccatcccttcccgtcctctgtggtg
ggtgagactccctgataagcactggttgggcagctttctctgtgagaaag
acagaaaaaagtccgctgtccttacctcactctgtaggcaggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_58883249_58884168
seq2: B6Ng01-076I15.b_42_966

seq1  GAATTCTTAGGATAAGCCCTACTTGATCATGGGTAGGAGTCTAATTGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGATAAGCCCTACTTGATCATGGGTAGGAGTCTAATTGACT  50

seq1  AGCATCTGCTGAAGATGTTGCATTTAGTCACGAGAGATATCTATCAGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTGCTGAAGATGTTGCATTTAGTCACGAGAGATATCTATCAGTGG  100

seq1  CTTTCTGTCTCTCTGGTTTCTCTGTCTGATTTTATTATCAGAACACTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTCTCTCTGGTTTCTCTGTCTGATTTTATTATCAGAACACTACT  150

seq1  GACCACATACAACGGGATAGATATAGTCCTAGGTTTTGGAAGCATTTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACATACAACGGGATAGATATAGTCCTAGGTTTTGGAAGCATTTAGA  200

seq1  AGGGATTGCTATGAATAGCAAATATTTCTTGAAGCCATACGGCAATGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTGCTATGAATAGCAAATATTTCTTGAAGCCATACGGCAATGGAT  250

seq1  CTTTTTGGGGATGCACTTTTTAGTGACTAGTCATCTGTTTTCATTTTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGGGGATGCACTTTTTAGTGACTAGTCATCTGTTTTCATTTTTGA  300

seq1  TTTCATTGAGTCAGTTCAGTGGAGAACTTATATTTCCTCCAGGTTGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTGAGTCAGTTCAGTGGAGAACTTATATTTCCTCCAGGTTGTTTA  350

seq1  GACGTTCTGGCGTGTCCATGGTATCTGTTATACAAGTGAACCAAAGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTTCTGGCGTGTCCATGGTATCTGTTATACAAGTGAACCAAAGTCTT  400

seq1  TCCCTGCCTCATCTTCCCTCAGAGTCCCTTCACCCAAGGGACAGGAACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCCTCATCTTCCCTCAGAGTCCCTTCACCCAAGGGACAGGAACCT  450

seq1  TTCCGTGAGTTCCCTCCCAGCCACCTTGTGGTTCCTGTCACCATGGTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGTGAGTTCCCTCCCAGCCACCTTGTGGTTCCTGTCACCATGGTGTA  500

seq1  GTATAATTAGCAATTGTCCCATTTGTTCGCTCCATCTCTTGGTCCAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATTAGCAATTGTCCCATTTGTTCGCTCCATCTCTTGGTCCAAACT  550

seq1  AGGAGGTCCTTGAGTTGGGATGATGTGTTTTGTTTGTTTAATCTCTGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTCCTTGAGTTGGGATGATGTGTTTTGTTTGTTTAATCTCTGGTG  600

seq1  CCCTGCTTATCTCTCATACACATCT-CCCTTTCATCAGTAAATAACTGTG  649
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCCTGCTTATCTCTCATACACATCTCCCCTTTCATCAGTAAATAACTGTG  650

seq1  CACCCCATGG-TTGATCAGAGAAACATGGCAGTATAGTCTAAACGAGTA-  697
      |||||||||| |||||||||||||||||||||||||||||||||||||| 
seq2  CACCCCATGGTTTGATCAGAGAAACATGGCAGTATAGTCTAAACGAGTAT  700

seq1  TTCTGAAATCACGATAGCGTGGGATTTCT-AATGACTTTCT-CCTGGAGG  745
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  TTCTGAAATCACGATAGCGTGGGATTTCTAAATGACTTTCTCCCTGGAGG  750

seq1  TGCCAC-AAAACTGAGATGCCAGCAAGTGTATCTGCTTTATTGGACTGGG  794
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAAAAACTGAGATGCCAGCAAGTGTATCTGCTTTATTGGACTGGG  800

seq1  GGGTGGGGAGCTTCTCTGAAAGTGCCTCACTTGAAGGTATGCTGTTCTTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGGAGCTTCTCTGAAAGTGCCTCACTTGAAGGTATGCTGTTCTTT  850

seq1  TAACTCTATGCTCCCTGTCTCTGCCAGCCCTCTGCTCATCACCCTGGAAA  894
      ||||||||| || |||||||||||||||||||||||||||| |||| |||
seq2  TAACTCTATTCT-CCTGTCTCTGCCAGCCCTCTGCTCATCA-CCTGTAAA  898

seq1  TA-CCCTGCCTCACCCGCTCCTGGGGT  920
      || ||||||||||||||||||||||||
seq2  TACCCCTGCCTCACCCGCTCCTGGGGT  925

seq1: chr10_59024884_59025579
seq2: B6Ng01-076I15.g_68_761 (reverse)

seq1  AGCCTGGCCTACAGAGTGAGGTAAAGGACAGCGGAC-TTTCTCTGTCTTT  49
      ||||| |||||||||||||||| ||||||||||||| ||| |||||||||
seq2  AGCCT-GCCTACAGAGTGAGGT-AAGGACAGCGGACTTTTTTCTGTCTTT  48

seq1  CTACACAGAGAAAGCTGCCC-ACCAGTGCTTATCAGGGAGTCTCACCCAA  98
      || ||||||||||||||||| ||||||||||||||||||||||||||| |
seq2  CT-CACAGAGAAAGCTGCCCAACCAGTGCTTATCAGGGAGTCTCACCC-A  96

seq1  CCACAGAGGACGGGAAGGGATGGATTTCACAAAGATGCTTCAGTTTCACC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAGGACGGGAAGGGATGGATTTCACAAAGATGCTTCAGTTTCACC  146

seq1  AGGTGGACAGACTTTGTGTGTCACCTCTCTGTGTACTAGTACACACCCAC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGACAGACTTTGTGTGTCACCTCTCTGTGTACTAGTACACACCCAC  196

seq1  ATCTGTGGACGCAGAGGTCTCTTTAAAGGTCTCATGATCTCTTCAGACTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGGACGCAGAGGTCTCTTTAAAGGTCTCATGATCTCTTCAGACTA  246

seq1  CTTTTACCAGCAAAGCATACATTATTACCCTCTCTTCAGAAATGTGTGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACCAGCAAAGCATACATTATTACCCTCTCTTCAGAAATGTGTGTG  296

seq1  TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCG  346

seq1  TGCTGCTATTCTAATTTTTAGTGTATTTTCCCCTACTTTTATCCTTTAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTATTCTAATTTTTAGTGTATTTTCCCCTACTTTTATCCTTTAGC  396

seq1  ACCGACATGAAGGCTGGCACCTCAGAGAAAATGTGCAAAACTCATATTCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGACATGAAGGCTGGCACCTCAGAGAAAATGTGCAAAACTCATATTCA  446

seq1  GAAATAGCAGTTTCTACAGTTTTCTGTACTTTGGGGGAGGGAGGGAGGTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGCAGTTTCTACAGTTTTCTGTACTTTGGGGGAGGGAGGGAGGTG  496

seq1  GAGCATATTGTACTTGCCCTTACCCAATCAAATAACGTCCTTCCTCTCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATATTGTACTTGCCCTTACCCAATCAAATAACGTCCTTCCTCTCTG  546

seq1  AAGTGCTGGGCTCCATGTGCAACCTCCTTGCTCCCCCCTTCCTGTGTTTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTGGGCTCCATGTGCAACCTCCTTGCTCCCCCCTTCCTGTGTTTC  596

seq1  TCCAGCTGGAAGAGGTGAAGGTGGCGACTTCCTGTTGTTAGTCTCTACAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTGGAAGAGGTGAAGGTGGCGACTTCCTGTTGTTAGTCTCTACAT  646

seq1  TACCTCACTACATGCTACTTGGCTCCCTCAATGCCTGCGTTAGAATTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCACTACATGCTACTTGGCTCCCTCAATGCCTGCGTTAGAATTC  694