BAC Information

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BAC

Clone NameB6Ng01-077F04
Chromosome10 (Build37)
Map Location 71,740,608 - 71,915,788
singlet/doubletdoublet
Overlap geneLOC100040505
Upstream geneUbe2d1, LOC665472, Zcd1, Ipmk, LOC100039860, LOC216081, EG216082, LOC622812, EG327767, 1700049L16Rik
Downstream geneZwint, LOC432471, LOC544705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077F04.bB6Ng01-077F04.g
ACCDH893330DH893331
length1,2281,097
definitionDH893330|Mus musculus domesticus DNA, BAC clone: B6Ng01-077F04, 5' end.DH893331|Mus musculus domesticus DNA, BAC clone: B6Ng01-077F04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,914,552 - 71,915,788)(71,740,608 - 71,741,713)
sequence
gaattccatcactcattttccaaaagggagacaactgtgctggcttcagt
cttcagagatgaagcacattttcattatctatgactttaatgcatcttct
ctctattaatggttttttgaaaaagcaaaaattttaaatcatgttaatga
aaccattgattaatcagggccccctgcagagtttcacattagcaaaatga
atgttacatatataggaggtcctagggttatacaagattttgacataaac
tttcagatgtcttgttaatatttataacaaattttcacaaaggttatagt
ttacaggtattttaattaatataggaaacatttttaaaaactcaccttta
tctaatcattcagatttattttttcaaagttatcattttaagaagtcact
gaaagtttttggtggtaccaaaatgattattatttgacttgtctgtatgt
gtggtttatgtatgactatgatcaacaaaattatcatgtgggcagtttca
gaaacaccaaatattcaatggagtatttattcaataaacacacaagtaca
aagagataaaaatacaaggttttcaatgtagctcaagtgatagatgaaat
ggatatcttctaatgaatacacctgatccattagcactaaaaaagcctaa
aagataaaaataaaggaataaataaacatttacatacaacttaatctgat
taatatcacttccgtttagcttcaatgtttcaagattagagtcaaggtgt
ttgcaagcctgagttccctgtggatgctctatttcctttcttctatgttc
tccaaatctttcctatcattgtatcctttatcttgaggcatccaattgga
ttgctttgagtgtcctttgaactcattctttcctctcacagaacaacaaa
agtttctggcttttgaatgcagagtggcttatgccttctcattccactag
agcactctcagcaaatatcagtatctctccattctgtggccccaaaatca
atcacagaggtagaatcttctacaatatcatattgggtctataagtcaca
gatgctgggattcaatatttgtatggctgcagaactaccaaagttacaaa
aagatcatgctcacccaggagctaggaagactgtgatggaggcctttaat
tctacaaacagattcagcaaagcagcagcagcactcatccttggcaacag
aacatgctaaactgacgttccacgtcag
gaattccctaagatgtacgctgaacctctcaatatatcagagatggatct
gttttattgctaagtagagactgcactccataatgtgtaatgaatgttca
aatttgtgatcttaatttcttagaaacatctgacaacatagactaatgca
gaactattttttgttattagaaggggatttggaatatgctgtagtttaat
aaagtttggttttgctaatttttcaaattgtggtgtgttttttcagtgag
tagtcagaggaacaggacttaaaatagcttagagttcattcgtttcaaga
tttcaaaatcaggtcaagagagacagaaaggttttatgaagataagtatc
ctcgaagcagagacaactcaggcacttagttcttctcgtattatttacat
tctgcaactctaccatttcatctctaaatcctcccaaagaaaaatctttg
tttcataaatattaaaacattctaaggtataaaatacataatataaatca
tatgagataccctaatattaacaataaaaacatcaattttgttacttttt
atgcctttgacagatttttttgtttcttcattgtttttgcattgctggag
tctgaactcatgaacttatgcacaaaagaaaaaagcagtctaccgctgag
ctatatcttcacccctaaatgtataggggtgtaaatatttcaaatatcaa
taggaatattcagctctgattagcctcttcacacaactaggaccaactca
gacaacatagtaagggaggcaaatgtccaataatgccagataagatgttt
tctggtggccagtggtcttatgtcttgacttcatgtttaaaacatattgc
taccatgcgtttctccttacacctcatgtcaatgtaaaaccatatttgaa
acatacaggggatcatgaaaatatgaacagttatgtttaatcatgtggga
actttggttggagtcatctgataacttaattccttaaattgatacaaaga
agtagatggcaatactatcttcagtgattgtaattgtcaattgattctca
gttactgaattatgaaagaaagttagaatgccccttttaaaatattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_71914552_71915788
seq2: B6Ng01-077F04.b_46_1273 (reverse)

seq1  CTGACGGTGGACGTGCAGTTTATAGCATTGTTTCTGTTTGTCAAGGATGA  50
      ||||||  | |||| |||||  ||||||   ||||| ||| |||||||||
seq2  CTGACGTGGAACGT-CAGTT--TAGCAT--GTTCTG-TTGCCAAGGATGA  44

seq1  -TGCTGGCCTGCTGCTGTTTGCTGAATCTG-TTGTAGAATTAAAGGCCTC  98
       |||||  |||||||  ||||||||||||| |||||||||||||||||||
seq2  GTGCTG--CTGCTGC--TTTGCTGAATCTGTTTGTAGAATTAAAGGCCTC  90

seq1  CATCACAGTCTT-CTAGCTCCTGGGTGAGCATGGATCTTTTGTAAACTTT  147
      |||||||||||| ||||||||||||||||||| ||||||||   ||||||
seq2  CATCACAGTCTTCCTAGCTCCTGGGTGAGCAT-GATCTTTTTGTAACTTT  139

seq1  GGTAG-TCTGCAGCCATAC-AATATTGAATCCCAGCAATCTGTGAC-TAT  194
      ||||| ||||||||||||| |||||||||||||||| ||||||||| |||
seq2  GGTAGTTCTGCAGCCATACAAATATTGAATCCCAGC-ATCTGTGACTTAT  188

seq1  AGACCAATAATGATATTGTAGGAAGATTCTACCTCTGTGATTGATTTTGG  244
      ||||| |  ||||||||||| |||||||||||||||||||||||||||||
seq2  AGACCCAATATGATATTGTA-GAAGATTCTACCTCTGTGATTGATTTTGG  237

seq1  GGCCACAGAATGGGAGAGATACCTGATATTTGCTGAGAGTGCTCTAGTGG  294
      ||||||||||| ||||||||| ||||||||||||||||||||||||||||
seq2  GGCCACAGAAT-GGAGAGATA-CTGATATTTGCTGAGAGTGCTCTAGTGG  285

seq1  AATGAGAAGGCATAAGCCACTCTGCATTCAAAAGCCAGAAACTTTTGTTG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAAGGCATAAGCCACTCTGCATTCAAAAGCCAGAAACTTTTGTTG  335

seq1  TTCTGTGAGAGGAAAGAATGAGTTCAAAGGACACTCAAAGCAATCCAATT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGAGAGGAAAGAATGAGTTCAAAGGACACTCAAAGCAATCCAATT  385

seq1  GGATGCCTCAAGATAAAGGATACAATGATAGGAAAGATTTGGAGAACATA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCTCAAGATAAAGGATACAATGATAGGAAAGATTTGGAGAACATA  435

seq1  GAAGAAAGGAAATAGAGCATCCACAGGGAACTCAGGCTTGCAAACACCTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGGAAATAGAGCATCCACAGGGAACTCAGGCTTGCAAACACCTT  485

seq1  GACTCTAATCTTGAAACATTGAAGCTAAACGGAAGTGATATTAATCAGAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTAATCTTGAAACATTGAAGCTAAACGGAAGTGATATTAATCAGAT  535

seq1  TAAGTTGTATGTAAATGTTTATTTATTCCTTTATTTTTATCTTTTAGGCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGTATGTAAATGTTTATTTATTCCTTTATTTTTATCTTTTAGGCT  585

seq1  TTTTTAGTGCTAATGGATCAGGTGTATTCATTAGAAGATATCCATTTCAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGTGCTAATGGATCAGGTGTATTCATTAGAAGATATCCATTTCAT  635

seq1  CTATCACTTGAGCTACATTGAAAACCTTGTATTTTTATCTCTTTGTACTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCACTTGAGCTACATTGAAAACCTTGTATTTTTATCTCTTTGTACTT  685

seq1  GTGTGTTTATTGAATAAATACTCCATTGAATATTTGGTGTTTCTGAAACT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTATTGAATAAATACTCCATTGAATATTTGGTGTTTCTGAAACT  735

seq1  GCCCACATGATAATTTTGTTGATCATAGTCATACATAAACCACACATACA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACATGATAATTTTGTTGATCATAGTCATACATAAACCACACATACA  785

seq1  GACAAGTCAAATAATAATCATTTTGGTACCACCAAAAACTTTCAGTGACT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGTCAAATAATAATCATTTTGGTACCACCAAAAACTTTCAGTGACT  835

seq1  TCTTAAAATGATAACTTTGAAAAAATAAATCTGAATGATTAGATAAAGGT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAATGATAACTTTGAAAAAATAAATCTGAATGATTAGATAAAGGT  885

seq1  GAGTTTTTAAAAATGTTTCCTATATTAATTAAAATACCTGTAAACTATAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTTAAAAATGTTTCCTATATTAATTAAAATACCTGTAAACTATAA  935

seq1  CCTTTGTGAAAATTTGTTATAAATATTAACAAGACATCTGAAAGTTTATG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTGAAAATTTGTTATAAATATTAACAAGACATCTGAAAGTTTATG  985

seq1  TCAAAATCTTGTATAACCCTAGGACCTCCTATATATGTAACATTCATTTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATCTTGTATAACCCTAGGACCTCCTATATATGTAACATTCATTTT  1035

seq1  GCTAATGTGAAACTCTGCAGGGGGCCCTGATTAATCAATGGTTTCATTAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGTGAAACTCTGCAGGGGGCCCTGATTAATCAATGGTTTCATTAA  1085

seq1  CATGATTTAAAATTTTTGCTTTTTCAAAAAACCATTAATAGAGAGAAGAT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTTAAAATTTTTGCTTTTTCAAAAAACCATTAATAGAGAGAAGAT  1135

seq1  GCATTAAAGTCATAGATAATGAAAATGTGCTTCATCTCTGAAGACTGAAG  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAAAGTCATAGATAATGAAAATGTGCTTCATCTCTGAAGACTGAAG  1185

seq1  CCAGCACAGTTGTCTCCCTTTTGGAAAATGAGTGATGGAATTC  1237
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACAGTTGTCTCCCTTTTGGAAAATGAGTGATGGAATTC  1228

seq1: chr10_71740608_71741713
seq2: B6Ng01-077F04.g_68_1164

seq1  GAATTCCCTAAGATGTACGCTGAACCTCTCAATATATCAGAGATGGATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTAAGATGTACGCTGAACCTCTCAATATATCAGAGATGGATCT  50

seq1  GTTTTATTGCTAAGTAGAGACTGCACTCCATAATGTGTAATGAATGTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTGCTAAGTAGAGACTGCACTCCATAATGTGTAATGAATGTTCA  100

seq1  AATTTGTGATCTTAATTTCTTAGAAACATCTGACAACATAGACTAATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTGATCTTAATTTCTTAGAAACATCTGACAACATAGACTAATGCA  150

seq1  GAACTATTTTTTGTTATTAGAAGGGGATTTGGAATATGCTGTAGTTTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATTTTTTGTTATTAGAAGGGGATTTGGAATATGCTGTAGTTTAAT  200

seq1  AAAGTTTGGTTTTGCTAATTTTTCAAATTGTGGTGTGTTTTTTCAGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTGGTTTTGCTAATTTTTCAAATTGTGGTGTGTTTTTTCAGTGAG  250

seq1  TAGTCAGAGGAACAGGACTTAAAATAGCTTAGAGTTCATTCGTTTCAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAGAGGAACAGGACTTAAAATAGCTTAGAGTTCATTCGTTTCAAGA  300

seq1  TTTCAAAATCAGGTCAAGAGAGACAGAAAGGTTTTATGAAGATAAGTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAATCAGGTCAAGAGAGACAGAAAGGTTTTATGAAGATAAGTATC  350

seq1  CTCGAAGCAGAGACAACTCAGGCACTTAGTTCTTCTCGTATTATTTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAAGCAGAGACAACTCAGGCACTTAGTTCTTCTCGTATTATTTACAT  400

seq1  TCTGCAACTCTACCATTTCATCTCTAAATCCTCCCAAAGAAAAATCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAACTCTACCATTTCATCTCTAAATCCTCCCAAAGAAAAATCTTTG  450

seq1  TTTCATAAATATTAAAACATTCTAAGGTATAAAATACATAATATAAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAAATATTAAAACATTCTAAGGTATAAAATACATAATATAAATCA  500

seq1  TATGAGATACCCTAATATTAACAATAAAAACATCAATTTTGTTACTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGATACCCTAATATTAACAATAAAAACATCAATTTTGTTACTTTTT  550

seq1  ATGCCTTTGACAGATTTTTTTGTTTCTTCATTGTTTTTGCATTGCTGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTTGACAGATTTTTTTGTTTCTTCATTGTTTTTGCATTGCTGGAG  600

seq1  TCTGAACTCATGAACTTATGCACAAAAGAAAAAAGCAGTCTACCGCTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACTCATGAACTTATGCACAAAAGAAAAAAGCAGTCTACCGCTGAG  650

seq1  CTATATCTTCACCCCTAAATGTATAGGGGTGTAAATATTTCAAATATCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCTTCACCCCTAAATGTATAGGGGTGTAAATATTTCAAATATCAA  700

seq1  TAGGAATATTCAGCTCTGATTAGCCTCTTCACACAACTAGGACCAACTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATATTCAGCTCTGATTAGCCTCTTCACACAACTAGGACCAACTCA  750

seq1  GACAACATAGTAAGGGAGGCAAATGTCCAATAATGCCAGATAAGATGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACATAGTAAGGGAGGCAAATGTCCAATAATGCCAGATAAGATGTTT  800

seq1  TCTGGTGGCCAGTGGTCTTATGTCTTGACTTCATGTTTAAAACATATTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGGCCAGTGGTCTTATGTCTTGACTTCATGTTTAAAACATATTGC  850

seq1  TACCATGCGTTTCTCCTTACACCTCATGTCAATGTAAAACCATATTTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGCGTTTCTCCTTACACCTCATGTCAATGTAAAACCATATTTGAA  900

seq1  ACATACAGGGGATCATGAAAATATGAACAGTTATGTTTAATCATGTGGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAGGGGATCATGAAAATATGAACAGTTATGTTTAATCATGTGGGA  950

seq1  ACTTTGGTTGGAGTCATCTGATAACTTAATTCCTTAAATTGATACAAAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACTTTGGTTGGAGTCATCTGATAACTTAATTCCTTAAATTGATAC-AAAG  999

seq1  AAGTTAGATAAGGCAATAACTATCTCCAGTGATTGTAAATGTCAAATTGA  1050
      ||| |||||  |||||| ||||||| |||||||||||| |||| ||||||
seq2  AAG-TAGAT--GGCAAT-ACTATCTTCAGTGATTGTAATTGTC-AATTGA  1044

seq1  -TCTCAGTTACTGACATATGAAAGACAGTTTAGAATGCCCCCTTTTTAAA  1099
       |||||||||||||  ||||||||| || ||||||||||||  |||||||
seq2  TTCTCAGTTACTGAATTATGAAAGAAAG-TTAGAATGCCCC--TTTTAAA  1091

seq1  ATTATTT  1106
      | |||||
seq2  A-TATTT  1097