BAC Information

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BAC

Clone NameB6Ng01-077N10
Chromosome10 (Build37)
Map Location 110,461,475 - 110,585,396
singlet/doubletdoublet
Overlap geneEG432502
Upstream geneLOC100042502, LOC100042506, LOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17
Downstream geneLOC667904, Osbpl8, Bbs10, Nap1l1, EG382421, Phlda1, Krr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077N10.bB6Ng01-077N10.g
ACCDH893709DH893710
length9791,164
definitionDH893709|Mus musculus domesticus DNA, BAC clone: B6Ng01-077N10, 5' end.DH893710|Mus musculus domesticus DNA, BAC clone: B6Ng01-077N10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,584,666 - 110,585,396)(110,461,475 - 110,462,644)
sequence
gaattcagttcccaccactcacattgggtgaataccaattaccaatcacc
tgtgacttcagccctaggggatccatcacctctggcttctgagggcaccc
gcagtcatatgcatgtatctacacactcacacacacacatcatacacaga
tgggtgaagaaaactggtattttattttaaattaaaaacaaaaaaagact
tctttgtaactatgtatatgaaatttgtatgacagagaatctaagtgaca
attgaagacattgtaagatttaaaataaatctaattatggttttggaaga
aaagcaaaaagacaataagcagaagcaatttttgacaagataatggctga
gaacttttcagaactgatgatagactccaacccacagacttaggaagctc
tccaaatcctaagcaatttgaagaacaataaatctgcacttagatccacc
acagagaagctgcagaattccaaaaaccaaagtgaaagcctttaaagtga
aaaagaaaagcatacgttctgtactggctagttttgtgtcaacttgacac
agctggagttatcacagagaaaggagcttcagttgaggaaatgcctccat
gagatccaactgtaaggcattttctcaattagtgaccaagggggaaaggc
cccttgtgggtgggaccatctctgggctggtagtgttggttccataagag
agcaggctgagcaagctaggggaggcaagccagtaaagaacatccctcca
tggcctctgcatcagctcctgcttcctgacctgcttgagttccagtcctg
acttccttggtgatgaacagcagcatggaagtgtaaaccgaataaaccct
ttcctccccaacttgcttcttggtcatgatttttgtgcagaaatagaaac
cctgactaagacacgttccatcagcagcaacagaaaccagaagacagtgg
gatgtgctcaattggccaaagaaatgact
gaattcagaacgatttgctcaacgaagaagggatacttctgcaatcttct
tctggtctaagctctcatgcttttatgtttgcatagaaaggggagcctta
gggttggagacaaaagatacccactgcggcaatcatgtgtcattttggct
caactggttactatggatacaaaatggatacaaggtgtctggtccattcc
acagtgtgttttactcagtctacctggagccttagtgtgtctgtcacggg
gccttcaaggtggtgggtgaacatgtccatgagagagccagtctggcagc
attggagaaacaggcacaacctctggcagttttcactcaacacttggttt
ttatccctttcactactgcctggctaggctgctctttttctcggagggcg
tggagcaattagcttcactgagtaatggttgttagcttttcccacttaca
gttaccattcagcttggtctcactgctaatcctgggtagcattatgttgt
tgtcacaaggtaatctaacaaatttcacactgctccaggtccggtgaact
atttatgtcatgccagagaacaggaacgttaacctacatctgtggcaata
cagtgtgtgtctactgctctgcctcctacatgaaaggcagcttttgtccc
tctttattgacaggactgagaagaatctattgccaagggcattaagcatg
tgccaggcaatttattttatagtaagtagcagcacacacccagcacagca
gcagagattggagttaggttaagttccctatggtctaccatggttttctc
tgatggcgcttgttattggcagtggccaaacaggctcaatgattgacttg
aacaagaagatgatgaatacctagccagggggtactggtgcacccctttc
atcccagcactcaggaggcagaggcaggggcatctctgggttcgaggcca
gcctggtctacagagcgattccaggacagccagggctacaagagaatccc
tgtctggaggaaaacaaaaacaaaccaacaaaggatatggatggaatatc
caacaatctacatgctatcttttaaggacataaggaatgtctatgttttc
ccaaggctgctgttagtaattgattactgtttttttccagaacaagggat
ggcagttcaggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_110584666_110585396
seq2: B6Ng01-077N10.b_46_776 (reverse)

seq1  GGCTTGCCTCCCCTAGCTTGCTCAGCCTGCTCTCTTATGGAACCAACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCCTCCCCTAGCTTGCTCAGCCTGCTCTCTTATGGAACCAACACT  50

seq1  ACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCCCCTTGGTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCCCCTTGGTCAC  100

seq1  TAATTGAGAAAATGCCTTACAGTTGGATCTCATGGAGGCATTTCCTCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAGAAAATGCCTTACAGTTGGATCTCATGGAGGCATTTCCTCAAC  150

seq1  TGAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAA  200

seq1  CTAGCCAGTACAGAACGTATGCTTTTCTTTTTCACTTTAAAGGCTTTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCAGTACAGAACGTATGCTTTTCTTTTTCACTTTAAAGGCTTTCAC  250

seq1  TTTGGTTTTTGGAATTCTGCAGCTTCTCTGTGGTGGATCTAAGTGCAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTTGGAATTCTGCAGCTTCTCTGTGGTGGATCTAAGTGCAGAT  300

seq1  TTATTGTTCTTCAAATTGCTTAGGATTTGGAGAGCTTCCTAAGTCTGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTTCTTCAAATTGCTTAGGATTTGGAGAGCTTCCTAAGTCTGTGG  350

seq1  GTTGGAGTCTATCATCAGTTCTGAAAAGTTCTCAGCCATTATCTTGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGTCTATCATCAGTTCTGAAAAGTTCTCAGCCATTATCTTGTCAA  400

seq1  AAATTGCTTCTGCTTATTGTCTTTTTGCTTTTCTTCCAAAACCATAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCTTCTGCTTATTGTCTTTTTGCTTTTCTTCCAAAACCATAATTA  450

seq1  GATTTATTTTAAATCTTACAATGTCTTCAATTGTCACTTAGATTCTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTTTAAATCTTACAATGTCTTCAATTGTCACTTAGATTCTCTGT  500

seq1  CATACAAATTTCATATACATAGTTACAAAGAAGTCTTTTTTTGTTTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAAATTTCATATACATAGTTACAAAGAAGTCTTTTTTTGTTTTTAA  550

seq1  TTTAAAATAAAATACCAGTTTTCTTCACCCATCTGTGTATGATGTGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATAAAATACCAGTTTTCTTCACCCATCTGTGTATGATGTGTGTG  600

seq1  TGTGAGTGTGTAGATACATGCATATGACTGCGGGTGCCCTCAGAAGCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTGTGTAGATACATGCATATGACTGCGGGTGCCCTCAGAAGCCAG  650

seq1  AGGTGATGGATCCCCTAGGGCTGAAGTCACAGGTGATTGGTAATTGGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATGGATCCCCTAGGGCTGAAGTCACAGGTGATTGGTAATTGGTAT  700

seq1  TCACCCAATGTGAGTGGTGGGAACTGAATTC  731
      |||||||||||||||||||||||||||||||
seq2  TCACCCAATGTGAGTGGTGGGAACTGAATTC  731

seq1: chr10_110461475_110462644
seq2: B6Ng01-077N10.g_69_1232

seq1  GAATTCAGAACGATTTGCTCAACGAAGAAGGGATACTTCTGCAATCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACGATTTGCTCAACGAAGAAGGGATACTTCTGCAATCTTCT  50

seq1  TCTGGTCTAAGCTCTCATGCTTTTATGTTTGCATAGAAAGGGGAGCCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCTAAGCTCTCATGCTTTTATGTTTGCATAGAAAGGGGAGCCTTA  100

seq1  GGGTTGGAGACAAAAGATACCCACTGCGGCAATCATGTGTCATTTTGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGAGACAAAAGATACCCACTGCGGCAATCATGTGTCATTTTGGCT  150

seq1  CAACTGGTTACTATGGATACAAAATGGATACAAGGTGTCTGGTCCATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGGTTACTATGGATACAAAATGGATACAAGGTGTCTGGTCCATTCC  200

seq1  ACAGTGTGTTTTACTCAGTCTACCTGGAGCCTTAGTGTGTCTGTCACGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTGTTTTACTCAGTCTACCTGGAGCCTTAGTGTGTCTGTCACGGG  250

seq1  GCCTTCAAGGTGGTGGGTGAACATGTCCATGAGAGAGCCAGTCTGGCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCAAGGTGGTGGGTGAACATGTCCATGAGAGAGCCAGTCTGGCAGC  300

seq1  ATTGGAGAAACAGGCACAACCTCTGGCAGTTTTCACTCAACACTTGGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGAAACAGGCACAACCTCTGGCAGTTTTCACTCAACACTTGGTTT  350

seq1  TTATCCCTTTCACTACTGCCTGGCTAGGCTGCTCTTTTTCTCGGAGGGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCCTTTCACTACTGCCTGGCTAGGCTGCTCTTTTTCTCGGAGGGCG  400

seq1  TGGAGCAATTAGCTTCACTGAGTAATGGTTGTTAGCTTTTCCCACTTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCAATTAGCTTCACTGAGTAATGGTTGTTAGCTTTTCCCACTTACA  450

seq1  GTTACCATTCAGCTTGGTCTCACTGCTAATCCTGGGTAGCATTATGTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCATTCAGCTTGGTCTCACTGCTAATCCTGGGTAGCATTATGTTGT  500

seq1  TGTCACAAGGTAATCTAACAAATTTCACACTGCTCCAGGTCCGGTGAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAAGGTAATCTAACAAATTTCACACTGCTCCAGGTCCGGTGAACT  550

seq1  ATTTATGTCATGCCAGAGAACAGGAACGTTAACCTACATCTGTGGCAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGTCATGCCAGAGAACAGGAACGTTAACCTACATCTGTGGCAATA  600

seq1  CAGTGTGTGTCTACTGCTCTGCCTCCTACATGAAAGGCAGCTTTTGTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGTGTCTACTGCTCTGCCTCCTACATGAAAGGCAGCTTTTGTCCC  650

seq1  TCTTTATTGACAGGACTGAGAAGAATCTATTGCCAAGGGCATTAAGCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTGACAGGACTGAGAAGAATCTATTGCCAAGGGCATTAAGCATG  700

seq1  TGCCAGGCAATTTATTTTATAGTAAGTAGCAGCACACACCCAGCACAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGCAATTTATTTTATAGTAAGTAGCAGCACACACCCAGCACAGCA  750

seq1  GCAGAGATTGGAGTTAGGTTAAGTTCCCTATGGTCTACCATGGTTTTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGATTGGAGTTAGGTTAAGTTCCCTATGGTCTACCATGGTTTTCTC  800

seq1  TGATGGCGCTTGTTATTGGCAGTGGCCAAACAGGCTCAATGATTGACTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCGCTTGTTATTGGCAGTGGCCAAACAGGCTCAATGATTGACTTG  850

seq1  AACAAGAAGATGATGAATACCTAGCCAGGGGGTACTGGTGCACCCCTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAAGATGATGAATACCTAGCCAGGGGGTACTGGTGCACCCCTTTC  900

seq1  ATCCCAGCACTCAGGAGGCAGAGGCAGGGGCATCTCTGAGTTCGAGGCCA  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATCCCAGCACTCAGGAGGCAGAGGCAGGGGCATCTCTGGGTTCGAGGCCA  950

seq1  GCCTGGTCTACAGAGCGAATTCCAGGACAGCCAGGGCTACACAGAGAAAC  1000
      ||||||||||||||||| ||||||||||||||||||||||| |||||| |
seq2  GCCTGGTCTACAGAGCG-ATTCCAGGACAGCCAGGGCTACA-AGAGAATC  998

seq1  CCTGTCTTGAAGAAAAACAAAAAACAAAACAAAACAAAAGAATAT-GAT-  1048
      ||||||| || |||||   ||||||||| |||    |||| |||| ||| 
seq2  CCTGTCTGGAGGAAAA--CAAAAACAAACCAA---CAAAGGATATGGATG  1043

seq1  GAATA-CCAACAAATCTACATGCTAATCTTTTACAGACATAA-GAATGTC  1096
      ||||| ||||| |||||||||||| ||||||||  ||||||| |||||||
seq2  GAATATCCAAC-AATCTACATGCT-ATCTTTTAAGGACATAAGGAATGTC  1091

seq1  TATGTTTCCCTACAGGCTGCTG-TAGTCATTCTGATTTACTG-TTTTATC  1144
      ||||||| || | ||||||||| |||| ||  ||| |||||| |||| ||
seq2  TATGTTTTCCCA-AGGCTGCTGTTAGTAAT--TGA-TTACTGTTTTTTTC  1137

seq1  CAG-ACAAGGTAT-GCAGTTTCAGGGGT  1170
      ||| |||||| || |||| |||||||||
seq2  CAGAACAAGGGATGGCAG-TTCAGGGGT  1164