BAC Information

Click to search

BAC

Clone NameB6Ng01-078G11
Chromosome10 (Build37)
Map Location 97,442,896 - 97,600,142
singlet/doubletdoublet
Overlap genenone
Upstream gene4930556N09Rik, EG667407, Dcn, Lum, Kera, Epyc, 4921510H08Rik
Downstream geneEG667438, EG432494, Atp2b1, Wdr51b, Galnt4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078G11.bB6Ng01-078G11.g
ACCDH894110DH894111
length6151,062
definitionDH894110|Mus musculus domesticus DNA, BAC clone: B6Ng01-078G11, 5' end.DH894111|Mus musculus domesticus DNA, BAC clone: B6Ng01-078G11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,442,896 - 97,443,510)(97,599,072 - 97,600,142)
sequence
gaattcaacatcaaaacaactaaactgcaattacaaacctgtggtcaata
acagtacagaataaatattttgagaagatctctcatgggcctattactaa
atccatgagaaatattttggagagttagtaaatatttctttcttaaaaaa
atactcttttaattggcatgtacttatctttctttgctcttgattttttt
caaaataatacttttattgattgttttggaatttcactacataaatacca
attatattcacttcccagttctccagtcctctcccaacctcaccatgaga
atattcccccactacaaaataagcaacaataaaaacaatgtacaatttgt
gttgtgtatataattaccagagcatggttaaacactcagtgtctatctcc
taaagaaaacttgaggcctcctccacctgcatcccagccagaagccaaca
gttgtggagagctacactccagcaccctctcacaatttttaagtttttct
ggcctagtcggcaatcattgggaagagagaccccttggccttgcaaactt
tatatgcctcagtacaggggaacgccagggccaagaagtgggagtgagtg
ggtagggagtggggg
gaattcctacacctggcccaggaagggaagttcattggctgactgctcag
gactgatgtcgatacctcgttagcatgggaaactccaggctcttattcga
cagtgactgattatcatggtcctctcagtggggtcgtggttacttgtccc
agagcaggtagaagcaggcaggaagtggtggtcccatttctactgttctc
gattctgagatttatggggtttgggctcactcaaccttaccaattcttct
gtctggtggcatggtccacttgcctttttgtttttataaacgagaggtgt
tgttgaagcatcagcttcctatcgtatctgtagttaaaattttcgatggg
gcatgtgtaagcatcaaaataaaacacaaggtaagccagaggagtagcaa
ggagtcacgaccaggcagacaagggataattgaaccaacttgatggatta
agatctccaaagcaagtctgtacagaaagtttgagggtataaacatcaat
agtatgcaagtccccccaccaacaccaacaccgagtttaacagtcatttg
acgttgaagggacccaaagctgtcatttgggcatgccatcacctgcttat
ctcaaaaggcctcctttcgggaggtgtgtctgagcaaggcgactgtggtc
cagcaggtctgagggaaacagcagtgtgctctgcagcagcagttccgtct
tcctttcctcttggagataagcctgtgaaatggaaagataaatacaccgg
tacatgcctagagtcgctaaacttaaactgggtgtagtgaaaggtagccc
gcattaggagctattagacaaagggttgtagaaccctggcaaagcttacc
ttctcagaaacagcagagtgaccatactttctgcaattctggggcaaaga
aatttgacttctagagcatgcacagttaattaaatactagggaaataaaa
ccctagaaacagaatatcttttagatatttcagtggagctctagctgggt
gcactcgggaaattatgaattgggtggtatttttttcttttgctgatcca
agatctgaaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_97442896_97443510
seq2: B6Ng01-078G11.b_42_656

seq1  GAATTCAACATCAAAACAACTAAACTGCAAGCACAAACCTGTGGTCAATA  50
      ||||||||||||||||||||||||||||||  ||||||||||||||||||
seq2  GAATTCAACATCAAAACAACTAAACTGCAATTACAAACCTGTGGTCAATA  50

seq1  ACAGTACAGAATAAATATTTTGAGAAGATCTCTCATGGGCCTATTACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTACAGAATAAATATTTTGAGAAGATCTCTCATGGGCCTATTACTAA  100

seq1  ATCCATGAGAAATATTTTGGAGAGTTAGTAAATATTTCTTTCTTAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGAGAAATATTTTGGAGAGTTAGTAAATATTTCTTTCTTAAAAAA  150

seq1  ATACTCTTTTAATTGGCATGTACTTATCTTTCTTTGCTCTTGATTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTTTTAATTGGCATGTACTTATCTTTCTTTGCTCTTGATTTTTTT  200

seq1  CAAAATAATACTTTTATTGATTGTTTTGGAATTTCACTACATAAATACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAATACTTTTATTGATTGTTTTGGAATTTCACTACATAAATACCA  250

seq1  ATTATATTCACTTCCCAGTTCTCCAGTCCTCTCCCAACCTCACCATGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTCACTTCCCAGTTCTCCAGTCCTCTCCCAACCTCACCATGAGA  300

seq1  ATATTCCCCCACTACAAAATAAGCAACAATAAAAACAATGTACAATTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCCCCACTACAAAATAAGCAACAATAAAAACAATGTACAATTTGT  350

seq1  GTTGTGTATATAATTACCAGAGCATGGTTAAACACTCAGTGTCTATCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTATATAATTACCAGAGCATGGTTAAACACTCAGTGTCTATCTCC  400

seq1  TAAAGAAAACTTGAGGCCTCCTCCACCTGCATCCCAGCCAGAAGCCAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAACTTGAGGCCTCCTCCACCTGCATCCCAGCCAGAAGCCAACA  450

seq1  GTTGTGGAGAGCTACACTCCAGCACCCTCTCACAATTTTTAAGTTTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGGAGAGCTACACTCCAGCACCCTCTCACAATTTTTAAGTTTTTCT  500

seq1  GGCCTAGTCGGCAATCATTGGGAAGAGAGACCCCTTGGCCTTGCAAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAGTCGGCAATCATTGGGAAGAGAGACCCCTTGGCCTTGCAAACTT  550

seq1  TATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGAAGTGGGAGTGAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGAAGTGGGAGTGAGTG  600

seq1  GGTAGGGAGTGGGGG  615
      |||||||||||||||
seq2  GGTAGGGAGTGGGGG  615

seq1: chr10_97599072_97600142
seq2: B6Ng01-078G11.g_68_1129 (reverse)

seq1  TGTTTCAGACTCTATGAATCAGCAAAGAGAGAAAAATACCAACCAATTCA  50
      ||||||||| ||| || ||||||||| ||| |||||||||| ||||||||
seq2  TGTTTCAGA-TCT-TGGATCAGCAAA-AGAAAAAAATACCACCCAATTCA  47

seq1  TAATTTCCCGAGTTGCA-CCAGCTAGAGCTACACTGAAATAATCTAAAAG  99
      |||||||||||| |||| |||||||||||| ||||||||| |||||||||
seq2  TAATTTCCCGAG-TGCACCCAGCTAGAGCTCCACTGAAAT-ATCTAAAAG  95

seq1  ATATTCTGTTTCTAGGGTTTTTATTTTCCCTAGTATTTAATTAACTTGTG  149
      |||||||||||||||||||||   ||||||||||||||||||||| ||||
seq2  ATATTCTGTTTCTAGGGTTTT--ATTTCCCTAGTATTTAATTAAC-TGTG  142

seq1  CATGCTCTAGAAGTCAAATTTCTTTGCCCCAGAATTGCAGAAAGTATGGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCTAGAAGTCAAATTTCTTTGCCCCAGAATTGCAGAAAGTATGGT  192

seq1  CACTCTTGCTGTTTCTGAGAAGGTAAGCTTTGCCAGGGTTCTACAACCCT  249
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTC-TGCTGTTTCTGAGAAGGTAAGCTTTGCCAGGGTTCTACAACCCT  241

seq1  TTGTCTAATAGCTCCTAATGCGGGCTACCTTTCACTAACACCCAGTTTAA  299
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTGTCTAATAGCTCCTAATGCGGGCTACCTTTCACT-ACACCCAGTTTAA  290

seq1  GTTTAGCGACTCTAGGCATGTACCGGTGTATTTATCTTTCCATTTCACAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGCGACTCTAGGCATGTACCGGTGTATTTATCTTTCCATTTCACAG  340

seq1  GCTTATCTCCAAGAGGAAAGGAAGACGGAACTGCTGCTGCAGAGCACACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATCTCCAAGAGGAAAGGAAGACGGAACTGCTGCTGCAGAGCACACT  390

seq1  GCTGTTTCCCTCAGACCTGCTGGACCACAGTCGCCTTGCTCAGACACACC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTCCCTCAGACCTGCTGGACCACAGTCGCCTTGCTCAGACACACC  440

seq1  TCCCGAAAGGAGGCCTTTTGAGATAAGCAGGTGATGGCATGCCCAAATGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAAAGGAGGCCTTTTGAGATAAGCAGGTGATGGCATGCCCAAATGA  490

seq1  CAGCTTTGGGTCCCTTCAACGTCAAATGACTGTTAAACTCGGTGTTGGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTGGGTCCCTTCAACGTCAAATGACTGTTAAACTCGGTGTTGGTG  540

seq1  TTGGTGGGGGGACTTGCATACTATTGATGTTTATACCCTCAAACTTTCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGGGGGACTTGCATACTATTGATGTTTATACCCTCAAACTTTCTG  590

seq1  TACAGACTTGCTTTGGAGATCTTAATCCATCAAGTTGGTTCAATTATCCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGACTTGCTTTGGAGATCTTAATCCATCAAGTTGGTTCAATTATCCC  640

seq1  TTGTCTGCCTGGTCGTGACTCCTTGCTACTCCTCTGGCTTACCTTGTGTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGCCTGGTCGTGACTCCTTGCTACTCCTCTGGCTTACCTTGTGTT  690

seq1  TTATTTTGATGCTTACACATGCCCCATCGAAAATTTTAACTACAGATACG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGATGCTTACACATGCCCCATCGAAAATTTTAACTACAGATACG  740

seq1  ATAGGAAGCTGATGCTTCAACAACACCTCTCGTTTATAAAAACAAAAAGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAGCTGATGCTTCAACAACACCTCTCGTTTATAAAAACAAAAAGG  790

seq1  CAAGTGGACCATGCCACCAGACAGAAGAATTGGTAAGGTTGAGTGAGCCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGACCATGCCACCAGACAGAAGAATTGGTAAGGTTGAGTGAGCCC  840

seq1  AAACCCCATAAATCTCAGAATCGAGAACAGTAGAAATGGGACCACCACTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCATAAATCTCAGAATCGAGAACAGTAGAAATGGGACCACCACTT  890

seq1  CCTGCCTGCTTCTACCTGCTCTGGGACAAGTAACCACGACCCCACTGAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTGCTTCTACCTGCTCTGGGACAAGTAACCACGACCCCACTGAGA  940

seq1  GGACCATGATAATCAGTCACTGTCGAATAAGAGCCTGGAGTTTCCCATGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCATGATAATCAGTCACTGTCGAATAAGAGCCTGGAGTTTCCCATGC  990

seq1  TAACGAGGTATCGACATCAGTCCTGAGCAGTCAGCCAATGAACTTCCCTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGAGGTATCGACATCAGTCCTGAGCAGTCAGCCAATGAACTTCCCTT  1040

seq1  CCTGGGCCAGGTGTAGGAATTC  1071
      ||||||||||||||||||||||
seq2  CCTGGGCCAGGTGTAGGAATTC  1062