BAC Information

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BAC

Clone NameB6Ng01-080A18
Chromosome10 (Build37)
Map Location 6,446,044 - 6,446,887
singlet/doubletsinglet
Overlap genePlekhg1
Upstream geneEsr1, LOC100041310, Gm221, 1700052N19Rik, Rmnd1, Zbtb2, Akap12, Mthfd1l
Downstream geneIyd, Ppp1r14c, EG666520, LOC100039303, LOC670558, LOC626333, LOC666541, 9230019H11Rik, LOC100041405, LOC672213, Lrp11, Pcmt1, Nup43, Lats1, Katna1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080A18.b
ACCDH895292
length869
definitionDH895292|Mus musculus domesticus DNA, BAC clone: B6Ng01-080A18, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggctaagaaggcattcactctatatcaggtgggagtaaactg
acagagaccctcagaaagagagctttctcccactcggctttcctactgca
attgtaaatgtgctttggagtgtctagtttttaagtagtttatgtcccta
aggttgtcttcactggatggcttgtatgtgacccgtcttattctggcttt
ttatttgaaaatatcaaagtagagtctaacttagtgcccagtcgaggtgt
ggcagtggacagaagacagtttaaacactgttttggaccctacaataatg
taaggacagaacctgaaggtaaccaggttgacaccttaataataagtttg
actattttggttctattaataaatttgtttttataattgatatgtatttt
atgtatttaccatctagagactgccatacccggcgatccatcccataatc
agcttccaaacgctgataccattgcatacaccagcaagattttgctgaaa
ggaccctgatatagctctctcttgtgagactatgctggggcctagcaaac
acataagtggatgctcacagtcagctattggatgggtcacacggccccca
atggaggagctaaagaaagtacccaaggagctaaagggatctgcaaccct
ataggtggaacaaaattatgaactaaccagtaccccggagctcttgactc
tagctgcatatgtatcaaaagatggcctagtcagctatcactggaaagag
aagcccattggacacgcaaactttatatgccccagtacaggggaacgcca
gggccaaaaagtgggagtgggtgggtagggcagtggggaaggggaaggac
ccagatgtatctgtctctt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_6446044_6446887
seq2: B6Ng01-080A18.b_38_881

seq1  GAATTCTAGGCTAAGAAGGCATTCACTCTATATCAGGTGGGAGTAAACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCTAAGAAGGCATTCACTCTATATCAGGTGGGAGTAAACTG  50

seq1  ACAGAGACCCTCAGAAAGAGAGCTTTCTCCCACTCGGCTTTCCTACTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACCCTCAGAAAGAGAGCTTTCTCCCACTCGGCTTTCCTACTGCA  100

seq1  ATTGTAAATGTGCTTTGGAGTGTCTAGTTTTTAAGTAGTTTATGTCCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAATGTGCTTTGGAGTGTCTAGTTTTTAAGTAGTTTATGTCCCTA  150

seq1  AGGTTGTCTTCACTGGATGGCTTGTATGTGACCCGTCTTATTCTGGCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTCTTCACTGGATGGCTTGTATGTGACCCGTCTTATTCTGGCTTT  200

seq1  TTATTTGAAAATATCAAAGTAGAGTCTAACTTAGTGCCCAGTCGAGGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGAAAATATCAAAGTAGAGTCTAACTTAGTGCCCAGTCGAGGTGT  250

seq1  GGCAGTGGACAGAAGACAGTTTAAACACTGTTTTGGACCCTACAATAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGGACAGAAGACAGTTTAAACACTGTTTTGGACCCTACAATAATG  300

seq1  TAAGGACAGAACCTGAAGGTAACCAGGTTGACACCTTAATAATAAGTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACAGAACCTGAAGGTAACCAGGTTGACACCTTAATAATAAGTTTG  350

seq1  ACTATTTTGGTTCTATTAATAAATTTGTTTTTATAATTGATATGTATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTTGGTTCTATTAATAAATTTGTTTTTATAATTGATATGTATTTT  400

seq1  ATGTATTTACCATCTAGAGACTGCCATACCCGGCGATCCATCCCATAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTACCATCTAGAGACTGCCATACCCGGCGATCCATCCCATAATC  450

seq1  AGCTTCCAAACGCTGATACCATTGCATACACCAGCAAGATTTTGCTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCAAACGCTGATACCATTGCATACACCAGCAAGATTTTGCTGAAA  500

seq1  GGACCCTGATATAGCTCTCTCTTGTGAGACTATGCTGGGGCCTAGCAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCTGATATAGCTCTCTCTTGTGAGACTATGCTGGGGCCTAGCAAAC  550

seq1  ACAGAAGTGGATGCTCACAGTCAGCTATTGGATGGGTCACACGGCCCCCA  600
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGTGGATGCTCACAGTCAGCTATTGGATGGGTCACACGGCCCCCA  600

seq1  ATGGAGGAGCTAAAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGAGCTAAAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCT  650

seq1  ATAGGTGGAACAAAATTATGAACTAACCAGTACCCCGGAGCTCTTGACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTGGAACAAAATTATGAACTAACCAGTACCCCGGAGCTCTTGACTC  700

seq1  TAGCTGCATATGTATCAAAAGATGGCCTAGTCAGCTATCACTGGAAAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCATATGTATCAAAAGATGGCCTAGTCAGCTATCACTGGAAAGAG  750

seq1  AGGCCCATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGAACGCCA  800
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGAACGCCA  800

seq1  GGGCCAAAAAGTGGGAGTGGGTGGGTAGGGCAGTGGGGAGGGGG  844
      ||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGGCCAAAAAGTGGGAGTGGGTGGGTAGGGCAGTGGGGAAGGGG  844