BAC Information

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BAC

Clone NameB6Ng01-082F05
Chromosome10 (Build37)
Map Location 82,590,263 - 82,722,335
singlet/doubletdoublet
Overlap geneChst11, Slc41a2
Upstream geneAU041133, LOC100042712, B230315N10Rik, LOC100042718, EG237412, LOC666611, Gm1553, LOC544716, 1190007I07Rik, Tdg, Glt8d2, Hcfc2, Nfyb, 1700028I16Rik, Txnrd1, Eid3, EG216185
Downstream geneD10Wsu102e, LOC666748, Aldh1l2, A230046K03Rik, Appl2, 1500009L16Rik, LOC100041225, C230099D08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082F05.bB6Ng01-082F05.g
ACCDH896912DH896913
length1,02173
definitionDH896912|Mus musculus domesticus DNA, BAC clone: B6Ng01-082F05, 5' end.DH896913|Mus musculus domesticus DNA, BAC clone: B6Ng01-082F05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,590,263 - 82,591,295)(82,722,263 - 82,722,335)
sequence
gaattccgagaggtgatcagcaagtagggaataagtttgtatatatccag
gaagcagggatggccatgagagggggctctcttgggctgccaggagagca
ctgagcctgttgctggtcgggtgtcttggtggtgattgacttgtaggttc
ccttcacgtttccatgtccctgcagatctgtatgaccttgtgttagggct
taggcgggcctctctacttctgagtttctttgcggtttctttttattgtc
tcctgattgatgggagaaatgtcagggtggaggccagcctcggcgagtgc
ctggggaccttcagagcccccaggtcccatctctgagggatctctgagcc
ctgaggctggagatcagggtctcctactaggacagcaggccttcccacgc
cagagctcactagcaaagtccatctgccctaccttgagacagaatatacc
agaaagtcagtatagagggagtgttacaagaaatgtagagttaaaacaaa
aaagataggaaatacaataattttgaaccaaatgagcacatcaggatgca
cacacggtgatacaccattggcatcatgtacaaaatgcacgagcgtaact
gagttccaagaacgtaagattaaacacacacataacattttaggtaggtt
ttcgattttatattggacacattctcgggtatcgtggggcacatgtggct
gcgtatggcccctgagctgcaggtcacacacttccatcctgtatgtcatg
ggtggctgtgctctcctatgaagccacggcaagctcattgtgatacaata
gagagcacttcgtccctcagccccggtgtctgtaaattcacaggtgtccc
cgctctcgttggaagcgtggaattaaagatgtgcttctgctgcattttaa
aatggcagtcactgacttattttgctggctttggtttttgggtttttttt
ttttttgtgttgtgtgttgttttactttccccacggtctaagtgtgtgtt
gcttaccagtcagtcacatgc
tttccacatgtattagtcaagattctccaaagagtgaaagtggaaagggg
tgaggagagagagggggagggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_82590263_82591295
seq2: B6Ng01-082F05.b_44_1064

seq1  GAATTCCGAGAGGTGATCAGCAAGTAGGGAATAAGTTTGTATATATCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGAGAGGTGATCAGCAAGTAGGGAATAAGTTTGTATATATCCAG  50

seq1  GAAGCAGGGATGGCCATGAGAGGGGGCTCTCTTGGGCTGCCAGGAGAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGGGATGGCCATGAGAGGGGGCTCTCTTGGGCTGCCAGGAGAGCA  100

seq1  CTGAGCCTGTTGCTGGTCGGGTGTCTTGGTGGTGATTGACTTGTAGGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCTGTTGCTGGTCGGGTGTCTTGGTGGTGATTGACTTGTAGGTTC  150

seq1  CCTTCACGTTTCCATGTCCCTGCAGATCTGTATGACCTTGTGTTAGGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACGTTTCCATGTCCCTGCAGATCTGTATGACCTTGTGTTAGGGCT  200

seq1  TAGGCGGGCCTCTCTACTTCTGAGTTTCTTTGCGGTTTCTTTTTATTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCGGGCCTCTCTACTTCTGAGTTTCTTTGCGGTTTCTTTTTATTGTC  250

seq1  TCCTGATTGATGGGAGAAATGTCAGGGTGGAGGCCAGCCTCGGCGAGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATTGATGGGAGAAATGTCAGGGTGGAGGCCAGCCTCGGCGAGTGC  300

seq1  CTGGGGACCTTCAGAGCCCCCAGGTCCCATCTCTGAGGGATCTCTGAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGACCTTCAGAGCCCCCAGGTCCCATCTCTGAGGGATCTCTGAGCC  350

seq1  CTGAGGCTGGAGATCAGGGTCTCCTACTAGGACAGCAGGCCTTCCCACGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCTGGAGATCAGGGTCTCCTACTAGGACAGCAGGCCTTCCCACGC  400

seq1  CAGAGCTCACTAGCAAAGTCCATCTGCCCTACCTTGAGACAGAATATACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTCACTAGCAAAGTCCATCTGCCCTACCTTGAGACAGAATATACC  450

seq1  AGAAAGTCAGTATAGAGGGAGTGTTACAAGAAATGTAGAGTTAAAACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTCAGTATAGAGGGAGTGTTACAAGAAATGTAGAGTTAAAACAAA  500

seq1  AAAGATAGGAAATACAATAATTTTGAACCAAATGAGCACATCAGGATGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAGGAAATACAATAATTTTGAACCAAATGAGCACATCAGGATGCA  550

seq1  CACACGGTGATACACCATTGGCATCATGTACAAAATGCACGAGCGTAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGGTGATACACCATTGGCATCATGTACAAAATGCACGAGCGTAACT  600

seq1  GAGTTCCAAGAACGTAAGATTAAACACACACATAACATTTTAGGTAGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCAAGAACGTAAGATTAAACACACACATAACATTTTAGGTAGGTT  650

seq1  TTCGATTTTATATTGGACACATTCTCGGGTATCGTGGGGCACATGTGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGATTTTATATTGGACACATTCTCGGGTATCGTGGGGCACATGTGGCT  700

seq1  GCGTATGGCCCCTGAGCTGCAGGTCACACACTTCCATCCTGTATGTCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTATGGCCCCTGAGCTGCAGGTCACACACTTCCATCCTGTATGTCATG  750

seq1  GGTGGCTGTGCTCTCCTATGAAGCCACGGCAAGCTCATTGTGATACAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTGTGCTCTCCTATGAAGCCACGGCAAGCTCATTGTGATACAATA  800

seq1  GAGAGCACTTCGTCCCTCAGCCCCGGTGTCTGTAAATTCACAGGTGTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCACTTCGTCCCTCAGCCCCGGTGTCTGTAAATTCACAGGTGTCCC  850

seq1  CGCTCTCGTTGGAAGCGTGGAATTAAAGATGTGCTTCTGCTGCATTTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCTCGTTGGAAGCGTGGAATTAAAGATGTGCTTCTGCTGCATTTTAA  900

seq1  AATGGCAGTCACTGACTTATTTTGCTGGCTTTGGTTTTTTGGGTTTTTTT  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AATGGCAGTCACTGACTTATTTTGCTGGCTTTGG-TTTTTGGGTTTTTTT  949

seq1  TTTTTTTGTTGTTGTTGTTGTTGTTTTTTACTTTTCCCCACGGGTTCTAA  1000
      |||||||| ||||||   |||||  |||||| |||||||||||  |||||
seq2  TTTTTTTG-TGTTGT--GTGTTG--TTTTAC-TTTCCCCACGG--TCTAA  991

seq1  GGTGTGTGTTGCTTAACCAGTCAGTCACCATGC  1033
       ||||||||||||| |||||||||||| |||||
seq2  -GTGTGTGTTGCTT-ACCAGTCAGTCA-CATGC  1021

seq1: chr10_82722263_82722335
seq2: B6Ng01-082F05.g_73_145 (reverse)

seq1  CTCCCTCCCCCTCTCTCTCCTCACCCCTTTCCACTTTCACTCTTTGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCCCCCTCTCTCTCCTCACCCCTTTCCACTTTCACTCTTTGGAGA  50

seq1  ATCTTGACTAATACATGTGGAAA  73
      |||||||||||||||||||||||
seq2  ATCTTGACTAATACATGTGGAAA  73