BAC Information

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BAC

Clone NameB6Ng01-082F13
Chromosome10 (Build37)
Map Location 93,774,131 - 93,897,472
singlet/doubletdoublet
Overlap geneLOC100041955
Upstream geneLOC100041854, Lta4h, Hal, Amdhd1, Ccdc38, Snrpf, LOC100041873, Ntn4, LOC667338, LOC100041907, Usp44, Metap2, Vezt, Fgd6, Nr2c1, Ndufa12, EG215472
Downstream geneTmcc3, EG667315, 4921537D05Rik, Plxnc1, Cradd, Socs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082F13.bB6Ng01-082F13.g
ACCDH896926DH896927
length937305
definitionDH896926|Mus musculus domesticus DNA, BAC clone: B6Ng01-082F13, 5' end.DH896927|Mus musculus domesticus DNA, BAC clone: B6Ng01-082F13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,774,131 - 93,775,072)(93,897,168 - 93,897,472)
sequence
gaattctacactgctttctttactttgctagaagtcaaagcagcaaaagg
ccgggggtccatcctggccttgatctggcagaatggcatcctagctcaca
ggtgtgcagtgtattcgtggctggggaactatgccctttctccctcgcac
cccaaattagcatttgaggatggccttccagagtggtttggagatgttgg
ggtgggagactgtgtgttaggagacagttttgcaagcaggtcgacctgtg
ggttttgctggcctggaggttgggactgccctctgctgagcaactttgct
aggcagagactacatggactatgctccatacgatggtcattcttccagcc
ctgacttgactccgtgtttcctattcaacttttaaacccttccatctccc
ccaccccaagaactccccaaacacggaacctctagagtaggaactgacag
gagtgtgcctttggcgtgggaagggaaaaccaaggtactttggaggtggc
gcatcacctcccccgctccccgcccgtcactccctcgaacactcagctcc
ggcacccgcctcgctcgctcgcagctagaactttctcccactgggctccg
ggagcctccggacacggggtatcggcggctcctgcagtgatcggaggaga
actccaggctgaggctagagccgaagcaagaagagccgagtgcgcgcggt
ttgaaacggccaccacaaccactgtcaccaggcagcccggcgagccccgc
ccgtctcgatcctggcctcagtgtacgcggagtcgcccggcctgcggggg
ccagcagcatgcgagggtgagtgtgcctccctggtgtaaccaggaaaggt
ggggatggtcgcatcgaggtatccgcgacacctctggcacgtatcaactt
ggaggccttggtggcgtgtggcccatcagccaaggaa
ttactgcaagggcaaggaccctaaagtacaggtgcatgggtaagctttga
agagactctaaaaatgggtcgggaacacccaagtagctttcgtttttcct
tcttccagattccccagcatgctcacagtcagatgactcgtgtagtcttc
cctctgtggaggattcattgaacagggtttttttccctcaatatacacac
aaaaaaagacaagttttaaaattataatttaggttgtcccagaaaaagaa
gggaaatatttgagaggattacaatagtgtgtgtgtgtgtgtgtgtgtgt
gtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_93774131_93775072
seq2: B6Ng01-082F13.b_46_982

seq1  GAATTCTACACTGCTTTCTTTACTTTGCTAGAAGTCAAAGCAGCAAAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACACTGCTTTCTTTACTTTGCTAGAAGTCAAAGCAGCAAAAGG  50

seq1  CCGGGGGTCCATCCTGGCCTTGATCTGGCAGAATGGCATCCTAGCTCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGGGTCCATCCTGGCCTTGATCTGGCAGAATGGCATCCTAGCTCACA  100

seq1  GGTGTGCAGTGTATTCGTGGCTGGGGAACTATGCCCTTTCTCCCTCGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCAGTGTATTCGTGGCTGGGGAACTATGCCCTTTCTCCCTCGCAC  150

seq1  CCCAAATTAGCATTTGAGGATGGCCTTCCAGAGTGGTTTGGAGATGTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATTAGCATTTGAGGATGGCCTTCCAGAGTGGTTTGGAGATGTTGG  200

seq1  GGTGGGAGACTGTGTGTTAGGAGACAGTTTTGCAAGCAGGTCGACCTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAGACTGTGTGTTAGGAGACAGTTTTGCAAGCAGGTCGACCTGTG  250

seq1  GGTTTTGCTGGCCTGGAGGTTGGGACTGCCCTCTGCTGAGCAACTTTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGCTGGCCTGGAGGTTGGGACTGCCCTCTGCTGAGCAACTTTGCT  300

seq1  AGGCAGAGACTACATGGACTATGCTCCATACGATGGTCATTCTTCCAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGACTACATGGACTATGCTCCATACGATGGTCATTCTTCCAGCC  350

seq1  CTGACTTGACTCCGTGTTTCCTATTCAACTTTTAAACCCTTCCATCTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTGACTCCGTGTTTCCTATTCAACTTTTAAACCCTTCCATCTCCC  400

seq1  CCACCCCAAGAACTCCCCAAACACGGAACCTCTAGAGTAGGAACTGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCAAGAACTCCCCAAACACGGAACCTCTAGAGTAGGAACTGACAG  450

seq1  GAGTGTGCCTTTGGCGTGGGAAGGGAAAACCAAGGTACTTTGGAGGTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGCCTTTGGCGTGGGAAGGGAAAACCAAGGTACTTTGGAGGTGGC  500

seq1  GCATCACCTCCCCCGCTCCCCGCCCGTCACTCCCTCGAACACTCAGCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCACCTCCCCCGCTCCCCGCCCGTCACTCCCTCGAACACTCAGCTCC  550

seq1  GGCACCCGCCTCGCTCGCTCGCAGCTAGAACTTTCTCCCACTGGGCTCCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCCGCCTCGCTCGCTCGCAGCTAGAACTTTCTCCCACTGGGCTCCG  600

seq1  GGAGCCTCCGGACACGGGGTATCGGCGGCTCCTGCAGTGATCGGAGGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTCCGGACACGGGGTATCGGCGGCTCCTGCAGTGATCGGAGGAGA  650

seq1  ACTCCAGGCTGAGGCTAGAGCCGAAGCAAGAAGAGCCGAGTGCGCGCGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGGCTGAGGCTAGAGCCGAAGCAAGAAGAGCCGAGTGCGCGCGGT  700

seq1  TTGAAACGGCCACCACAACCACTGTCACCAGGCAGCCCGGCGAGCCCCGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACGGCCACCACAACCACTGTCACCAGGCAGCCCGGCGAGCCCCGC  750

seq1  CCGTCTCGATCCTGGCCTCAGTGTACGCGGAGTCGCCCGGCCTGCGGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCTCGATCCTGGCCTCAGTGTACGCGGAGTCGCCCGGCCTGCGGGGG  800

seq1  CCAGCAGCATGCGGAGGGTGAGTGTGCCTCCCTGGTGTAAGCAAGGGAAG  850
      |||||||||||| ||||||||||||||||||||||||||| ||  |||| 
seq2  CCAGCAGCATGC-GAGGGTGAGTGTGCCTCCCTGGTGTAACCA--GGAAA  847

seq1  GGTGGGGATGGTCGCAGCGAGGTAGCCCGCGACACCTCTGGCCACGTATC  900
      |||||||||||||||| |||||||  ||||||||||||||| ||||||||
seq2  GGTGGGGATGGTCGCATCGAGGTA-TCCGCGACACCTCTGG-CACGTATC  895

seq1  CACCTTGGGGCCTTGGT-GCGTGTGGCCCCATCAGCCAAGGAA  942
       || | | ||||||||| |||||||| ||||||||||||||||
seq2  AACTTGGAGGCCTTGGTGGCGTGTGG-CCCATCAGCCAAGGAA  937

seq1: chr10_93897168_93897472
seq2: B6Ng01-082F13.g_73_377 (reverse)

seq1  CACACACACACACACACACACACACACACTATTGTAATCCTCTCAAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACTATTGTAATCCTCTCAAATAT  50

seq1  TTCCCTTCTTTTTCTGGGACAACCTAAATTATAATTTTAAAACTTGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTCTTTTTCTGGGACAACCTAAATTATAATTTTAAAACTTGTCTT  100

seq1  TTTTTGTGTGTATATTGAGGGAAAAAAACCCTGTTCAATGAATCCTCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTGTGTATATTGAGGGAAAAAAACCCTGTTCAATGAATCCTCCAC  150

seq1  AGAGGGAAGACTACACGAGTCATCTGACTGTGAGCATGCTGGGGAATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAAGACTACACGAGTCATCTGACTGTGAGCATGCTGGGGAATCTG  200

seq1  GAAGAAGGAAAAACGAAAGCTACTTGGGTGTTCCCGACCCATTTTTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGAAAAACGAAAGCTACTTGGGTGTTCCCGACCCATTTTTAGAG  250

seq1  TCTCTTCAAAGCTTACCCATGCACCTGTACTTTAGGGTCCTTGCCCTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCAAAGCTTACCCATGCACCTGTACTTTAGGGTCCTTGCCCTTGC  300

seq1  AGTAA  305
      |||||
seq2  AGTAA  305