BAC Information

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BAC

Clone NameB6Ng01-082I02
Chromosome10 (Build37)
Map Location 58,647,694 - 58,814,040
singlet/doubletdoublet
Overlap geneSept10, Ankrd57, LOC664892, P4ha1
Upstream geneEG664783, 4933403O03Rik, EG245263, Gcc2, Lims1, Ranbp2, 6230424H07Rik, LOC100038981, Edar, LOC624335, LOC100039099, Sh3md4
Downstream geneLOC100039174, Pla2g12b, Oit3, Ccdc109a, LOC100039225, Cbara1, EG664907, LOC664936, Dnajb12, Ddit4, D10Ertd641e, Ascc1, Spock2, Chst3, LOC100039080, Psap, Cdh23, 4632428N05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082I02.bB6Ng01-082I02.g
ACCDH897040DH897041
length1,150931
definitionDH897040|Mus musculus domesticus DNA, BAC clone: B6Ng01-082I02, 5' end.DH897041|Mus musculus domesticus DNA, BAC clone: B6Ng01-082I02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,812,887 - 58,814,040)(58,647,694 - 58,648,618)
sequence
gaattccatccctgttgcttctgcttccaagttgctgtggatcagtagtt
ctgctccaacacaaaccctctccaagatgtcctgcctggccctgggctca
ttccagtgaatgggatggattagggacttgacaactctgaactgtgagcc
aaaataaggctcccctcctttgaaagttgtctttcttgagcactttctca
gtgacaggaaggtgcctagcacatatgctacactttagagatgacatgag
tgaggaagttgaagaagtctgacaaagtctacttattctcacatggctca
ctagctcccaagtaaaagcaaacacgtgttgctaggaatcagactgtgga
catgtccgcaatggtgcaatgtacatctgcaattagcgattaggctgata
actctattcaacgtcaaaacagaaagcctaagtttagttccttggtagag
aaataaaatgaactttaacaatgtcccactatcagttatttggggaacag
tgtgtagcgcatgcacagcgatgcattttcactgcggtaggcacacagca
tactattttgtgcagtcattctgattttaccacagagactacaatataca
aagctttgaatccctccaggactagatacaaacacagacacatccccaca
cagccgcacacacatacacacgattgactttttccactttaccattttga
taccctccccacggcacagcatttcgtacttctgtctctctggcaggtaa
tccacagctatcccttttttctttggtgcagttttctgatcagattggtc
gcccgacgctgacttattggcatctttttctttactcattatatattcaa
aatatactaagttaccattagctctctgatgttcaggatctaaggaagag
aaacaaaagtgtgcacataggcaagtttacagttgtcccatcatcagaaa
aagagcatatgaacagttaatattacataaggttttatcctgctaattta
aaataccttttgagaaaggaggcagtatagtgccaagtattagtgcaaaa
caagaatacagcagtgcacccagtcatcgagccaaacgcctgcctgtaca
gaaaatagcctggaaacagaacagtcttgtatcgtcaggaccatgctgct

gaattcttttaaaattatctgataattctagtttttggagactggcacat
cttttaaaacagtgtattctcccattactgaccataaacagtctgagggg
aaagccagcatcttcataattctgttttctctaagaattaacaaaatacc
ttgaatattaaaaggactgagtttatcagaataattactatcaacaccaa
accaggttccttagaatgctggtgtgaatatgacgtggtaatattccctt
ccaaaaaataaaatagtaaaaatctttaagtacatatttgacataaaaat
ttcaaagaagcatttattaatgatttaaaataggccagtaatgacttata
atagggccatgaatattcatgtagatgactatcttctcttacggtttttc
aaaaataaaaatacaggttctgttaattaaataaacaggacaatggagta
ctactcagctattaaaaagaatgaatttatgaaattcctaggcaaatgga
tggacctggagggcatcatcctgagtgacgtaacccaatcaaaaaagaac
tcacatgatatgtactcactgataagtggatattagcccagaaacttaga
atacccaagatataagatacaatttgtaaaacacatgaaaactcaagaag
aacgaagaccaaagtgtggacactttgtcccttcttagaattgggaacaa
aacacccatggaaggagttacagagacaaagtttggagctgagacgaaag
gatgaaccatctagagactgccatacctggggatccatcccataatcagt
ctccaaacgctgacaccattgcacacactaagcaagatttttgctgaaaa
ggacccagatatagctgtctcttgtgagaactatgcctgggcctagcaaa
cacataagtgatgctccacttgtcagctatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_58812887_58814040
seq2: B6Ng01-082I02.b_43_1192 (reverse)

seq1  AGCAGCAATTGGTGCCTGACGATACAGACCTGTTCTGTCTCCAGCGCT-G  49
      |||||||  |||| ||||||||||||   ||||||||| ||||| |||  
seq2  AGCAGCA--TGGT-CCTGACGATACAAGACTGTTCTGTTTCCAG-GCTAT  46

seq1  TTTCTGTACAGGGCAGCGTCT-GCTCTGATTGACTGGGTGCCACTGCTTG  98
      ||||||||||||   |||| | |||| || |||||||||| |||||| ||
seq2  TTTCTGTACAGGCAGGCGTTTGGCTC-GA-TGACTGGGTG-CACTGC-TG  92

seq1  TA-TCTTGTTTTGGCACTAATTACTTTGGCACTATTACTGCCTCCTTTCT  147
      || ||||||||| ||||||| ||| ||||||||| |||||||||||||||
seq2  TATTCTTGTTTT-GCACTAA-TAC-TTGGCACTA-TACTGCCTCCTTTCT  138

seq1  C-AAAGGTATTTT-AATTAGCA-GAT-AAACCTTATGTAATATAAACTGT  193
      | ||||||||||| |||||||| ||| |||||||||||||||| ||||||
seq2  CAAAAGGTATTTTAAATTAGCAGGATAAAACCTTATGTAATATTAACTGT  188

seq1  TCATATTGCTC-TTTTCTGATGATGGGACAACTGTAAACTTGCCTATGTG  242
      ||||| ||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCATA-TGCTCTTTTTCTGATGATGGGACAACTGTAAACTTGCCTATGTG  237

seq1  CACAC-TTTGTTTCTCTTCCTTAGATCCTGAACATCAGAGAGCTAATGGT  291
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTTTGTTTCTCTTCCTTAGATCCTGAACATCAGAGAGCTAATGGT  287

seq1  AACTTAGTATATTTTGAATATATAATGAGTAAAGAAAAAGATGCCAATAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAGTATATTTTGAATATATAATGAGTAAAGAAAAAGATGCCAATAA  337

seq1  GTCAGCGTCGGGCGACCAATCTGATCAGAAAACTGCACCAAAGAAAAAAG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCGTCGGGCGACCAATCTGATCAGAAAACTGCACCAAAGAAAAAAG  387

seq1  GGATAGCTGTGGATTACCTGCCAGAGAGACAGAAGTACGAAATGCTGTGC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGCTGTGGATTACCTGCCAGAGAGACAGAAGTACGAAATGCTGTGC  437

seq1  CGTGGGGAGGGTATCAAAATGGTAAAGTGGAAAAAGTCAATCGTGTGTAT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGGAGGGTATCAAAATGGTAAAGTGGAAAAAGTCAATCGTGTGTAT  487

seq1  GTGTGTGCGGCTGTGTGGGGATGTGTCTGTGTTTGTATCTAGTCCTGGAG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGCGGCTGTGTGGGGATGTGTCTGTGTTTGTATCTAGTCCTGGAG  537

seq1  GGATTCAAAGCTTTGTATATTGTAGTCTCTGTGGTAAAATCAGAATGACT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAAAGCTTTGTATATTGTAGTCTCTGTGGTAAAATCAGAATGACT  587

seq1  GCACAAAATAGTATGCTGTGTGCCTACCGCAGTGAAAATGCATCGCTGTG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAAATAGTATGCTGTGTGCCTACCGCAGTGAAAATGCATCGCTGTG  637

seq1  CATGCGCTACACACTGTTCCCCAAATAACTGATAGTGGGACATTGTTAAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCGCTACACACTGTTCCCCAAATAACTGATAGTGGGACATTGTTAAA  687

seq1  GTTCATTTTATTTCTCTACCAAGGAACTAAACTTAGGCTTTCTGTTTTGA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTTTATTTCTCTACCAAGGAACTAAACTTAGGCTTTCTGTTTTGA  737

seq1  CGTTGAATAGAGTTATCAGCCTAATCGCTAATTGCAGATGTACATTGCAC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGAATAGAGTTATCAGCCTAATCGCTAATTGCAGATGTACATTGCAC  787

seq1  CATTGCGGACATGTCCACAGTCTGATTCCTAGCAACACGTGTTTGCTTTT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCGGACATGTCCACAGTCTGATTCCTAGCAACACGTGTTTGCTTTT  837

seq1  ACTTGGGAGCTAGTGAGCCATGTGAGAATAAGTAGACTTTGTCAGACTTC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGAGCTAGTGAGCCATGTGAGAATAAGTAGACTTTGTCAGACTTC  887

seq1  TTCAACTTCCTCACTCATGTCATCTCTAAAGTGTAGCATATGTGCTAGGC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTTCCTCACTCATGTCATCTCTAAAGTGTAGCATATGTGCTAGGC  937

seq1  ACCTTCCTGTCACTGAGAAAGTGCTCAAGAAAGACAACTTTCAAAGGAGG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCCTGTCACTGAGAAAGTGCTCAAGAAAGACAACTTTCAAAGGAGG  987

seq1  GGAGCCTTATTTTGGCTCACAGTTCAGAGTTGTCAAGTCCCTAATCCATC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTTATTTTGGCTCACAGTTCAGAGTTGTCAAGTCCCTAATCCATC  1037

seq1  CCATTCACTGGAATGAGCCCAGGGCCAGGCAGGACATCTTGGAGAGGGTT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCACTGGAATGAGCCCAGGGCCAGGCAGGACATCTTGGAGAGGGTT  1087

seq1  TGTGTTGGAGCAGAACTACTGATCCACAGCAACTTGGAAGCAGAAGCAAC  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGGAGCAGAACTACTGATCCACAGCAACTTGGAAGCAGAAGCAAC  1137

seq1  AGGGATGGAATTC  1154
      |||||||||||||
seq2  AGGGATGGAATTC  1150

seq1: chr10_58647694_58648618
seq2: B6Ng01-082I02.g_63_993

seq1  GAATTCTTTTAAAATTATCTGATAATTCTAGTTTTTGGAGACTGGCACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAAAATTATCTGATAATTCTAGTTTTTGGAGACTGGCACAT  50

seq1  CTTTTAAAACAGTGTATTCTCCCATTACTGACCATAAACAGTCTGAGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAAACAGTGTATTCTCCCATTACTGACCATAAACAGTCTGAGGGG  100

seq1  AAAGCCAGCATCTTCATAATTCTGTTTTCTCTAAGAATTAACAAAATACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAGCATCTTCATAATTCTGTTTTCTCTAAGAATTAACAAAATACC  150

seq1  TTGAATATTAAAAGGACTGAGTTTATCAGAATAATTACTATCAACACCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATTAAAAGGACTGAGTTTATCAGAATAATTACTATCAACACCAA  200

seq1  ACCAGGTTCCTTAGAATGCTGGTGTGAATATGACGTGGTAATATTCCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTTCCTTAGAATGCTGGTGTGAATATGACGTGGTAATATTCCCTT  250

seq1  CCAAAAAATAAAATAGTAAAAATCTTTAAGTACATATTTGACATAAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAATAAAATAGTAAAAATCTTTAAGTACATATTTGACATAAAAAT  300

seq1  TTCAAAGAAGCATTTATTAATGATTTAAAATAGGCCAGTAATGACTTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGAAGCATTTATTAATGATTTAAAATAGGCCAGTAATGACTTATA  350

seq1  ATAGGGCCATGAATATTCATGTAGATGACTATCTTCTCTTACGGTTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGCCATGAATATTCATGTAGATGACTATCTTCTCTTACGGTTTTTC  400

seq1  AAAAATAAAAATACAGGTTCTGTTAATTAAATAAACAGGACAATGGAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAAATACAGGTTCTGTTAATTAAATAAACAGGACAATGGAGTA  450

seq1  CTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGA  500

seq1  TGGACCTGGAGGGCATCATCCTGAGTGACGTAACCCAATCAAAAAAGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCTGGAGGGCATCATCCTGAGTGACGTAACCCAATCAAAAAAGAAC  550

seq1  TCACATGATATGTACTCACTGATAAGTGGATATTAGCCCAGAAACTTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGATATGTACTCACTGATAAGTGGATATTAGCCCAGAAACTTAGA  600

seq1  ATACCCAAGATATAAGATACAATTTGTAAAACACATG-AAACTCAAGAAG  649
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATACCCAAGATATAAGATACAATTTGTAAAACACATGAAAACTCAAGAAG  650

seq1  AACGAAGACCAAAGTGTGGACACTTTGTCCCTTCTTAGAATTGGGAACAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAAGACCAAAGTGTGGACACTTTGTCCCTTCTTAGAATTGGGAACAA  700

seq1  AACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACGAAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACGAAAG  750

seq1  GATGAACCATCTAGAGACTGCCATACCTGGGGATCCATCCCATAATCAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAACCATCTAGAGACTGCCATACCTGGGGATCCATCCCATAATCAGT  800

seq1  CTCCAAACGCTGACACCATTGCACACACT-AGCAAGA-TTTTGCTG-AAA  846
      ||||||||||||||||||||||||||||| ||||||| |||||||| |||
seq2  CTCCAAACGCTGACACCATTGCACACACTAAGCAAGATTTTTGCTGAAAA  850

seq1  GGACCCAGATATAGCTGTCTCTTGTGAG-ACTATGCCGGGGCCTAGCAAA  895
      |||||||||||||||||||||||||||| |||||||| ||||||||||||
seq2  GGACCCAGATATAGCTGTCTCTTGTGAGAACTATGCCTGGGCCTAGCAAA  900

seq1  CACAGAAGTGGATGCT-CAC-TGTCAGCTATT  925
      |||| |||| |||||| ||| |||||||||||
seq2  CACATAAGT-GATGCTCCACTTGTCAGCTATT  931