BAC Information

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BAC

Clone NameB6Ng01-086E07
Chromosome10 (Build37)
Map Location 23,857,048 - 23,976,299
singlet/doubletdoublet
Overlap geneStx7, Moxd1
Upstream geneEya4, Rps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9
Downstream geneLOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086E07.bB6Ng01-086E07.g
ACCDH899713DH899714
length1,1821,153
definitionDH899713|Mus musculus domesticus DNA, BAC clone: B6Ng01-086E07, 5' end.DH899714|Mus musculus domesticus DNA, BAC clone: B6Ng01-086E07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,975,114 - 23,976,299)(23,857,048 - 23,857,883)
sequence
gaattctctggtgataaaaacaaaacaaaacaacccttaaaagaaactgt
attaaaccaagtaataacccgaatttcgaaggcagcatgtttaagtatta
ttagtcctgacaattccatcattgttgagtgcaccagctgaaggaatcat
ctattaaaataaattccaagctgaaggtaaagacacagcatgagaaggct
aaataaagaaaagccatgttggcctgaggtaatgtggcctgagataatgt
gggctgagtgtgggctgccagtaggcagagcaggtgatccaaacagatga
tccaagatgaggagagtgggtgtaatagaaactaccataagctgtctaca
atttacacattaatttgtaagaatgaaatgccaacatctaacacacacat
tttcaaactcacaatattttcttttcagactgtgtcttgaaagtagccca
ggctgaccttgaagtgacactcctccagccttagcttcctgagtacttgg
aatacagggatgccactataccagcctcccacttacaactcagccagttg
tttccacaatcaaatagaagtcaatatattagagtcaccagaggatttga
acaactaataacttttattgtaatcctatattcctccagataaattattt
attttgtgatcttagtaattcaatatttacctcattgcagcataacccta
attttgaatcatgtttacatgagtaaaattaaaatttaagacttaaccta
gtatcattaactttaagtattccaattaaataaagtcatgattggatgac
tgatatgttttatctgtttagttttgttattgtttacagccataaaatag
atagcattaacatttatgccacaaataggaactctctttgaattacagta
aaatttaaatcttacaaaaaatatctataatcaacattgttgaagttcac
tcaaatcacatacttgatagttcaaaacaatcttctttaaagtactttgt
atcagagaaggactgaggcctactttttaatattttttgtttatttaatg
cttttctgttaggaggtatgtgcaggcactgcagaaaatatgccaaagta
ggagatgaacctctgttttgaaattggaaggacaacttgtgggaggctga
cttttcctctttttacctggtgtttcaagttt
gaattctctgtttagctctgttctccaattgatagggttgtttggttctc
tggagtctaacttcctgagttctttgtatatatttgatattagtctccta
tctgatgtagggttggtaaagatccttttccaatctgttggctgccattt
tgtcctattggcagtgtcctttgccttacaaaagctttgcaattttatga
ggtcccatttatgaattcttgatctaagagcataagctctgttctgttta
gggaattttcccctgtgtccatgtgctcaaggttccttcccactttctct
tctattagatttagtgtctctggttttatgtggaggtccttgatgcactt
ggactttgcacaagttgataagaatgcatcaatttgcatttttctacatg
ctgactgccaggtgaaccagtaccctttgttgaatatgctgtcctttttc
cactggatggttttagcttctttgtcaaagatcaagtgaccatatgtgtg
tgggttcatttctggctcttcaattctattccattgatctacctgtctat
ctctgtaccaataccattcagtttttatcatgattgctctgtagtacagc
ttgaggtcagggatggtgattcccccagatgttcctttattgtggagaat
agtttttgatatcctgggttttttgttattccaaatgaatttgagaattt
ctctttttactctatgaagaattgagttggaatattgatggggatttgtg
ctgtatctgtagattgctttttgacaagatgggcatttttactatatata
catatatatatatatatatatatatacatcgccatacatatacacacaca
catatcataattaaaaacttcagtgctgaagaaattcaaagaataaaaaa
aattagtaaagattcaaattttaatttcttttttaccagagacatctatt
atccactaattccaaaatcaaaccccaggggtattctttgatttcacagc
accaggaaaagaagggacagggtcaatggtaacccctccccaccattctc
catggctctgatttcgtcccagttgctggattaatacccaatcagggagc
cacagcgggctgcccaatgaattgggagggctcagccgatgtgtccttcc
ttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_23975114_23976299
seq2: B6Ng01-086E07.b_45_1226 (reverse)

seq1  AAACCTGAAACACAGGGTGAAAAGAG--ATAGTCAG-CTCCCACAAGTTG  47
      |||| ||||||||  ||| |||||||  | |||||| |||||||||||||
seq2  AAACTTGAAACACCAGGTAAAAAGAGGAAAAGTCAGCCTCCCACAAGTTG  50

seq1  TCCTTCC-ATTTCTATACATGAGGTTCAATACCTCCTACTTTTGCATA-T  95
      ||||||| ||||| | ||| |||||||   | |||||||||| ||||| |
seq2  TCCTTCCAATTTCAAAACA-GAGGTTC---ATCTCCTACTTTGGCATATT  96

seq1  TTCTGCAGTGCCTGCACATACCTCCTAACAGACATGCAATAAATAAACAA  145
      |||||||||||||||||||||||||||||||| | ||| |||||||||||
seq2  TTCTGCAGTGCCTGCACATACCTCCTAACAGAAAAGCATTAAATAAACAA  146

seq1  AAAATATTTAAAAAGTAGGCCTCAGTCCTTCTCTGATACAAAGTACTTTA  195
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATA-TTAAAAAGTAGGCCTCAGTCCTTCTCTGATACAAAGTACTTTA  195

seq1  AAGGAAGATTGTTTTTGAACTATCAAGTATGTGATTTTGAGTGAACTTCA  245
      || |||||||| |||||||||||||||||||||| |||||||||||||||
seq2  AA-GAAGATTG-TTTTGAACTATCAAGTATGTGA-TTTGAGTGAACTTCA  242

seq1  ACAATGTTGATTATAGAATATTTTTTGTAAGATTTAAATTTTACTGTAAT  295
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACAATGTTGATTATAG-ATATTTTTTGTAAGATTTAAATTTTACTGTAAT  291

seq1  TCAAAGAGAGTTCCTATTTGTGGCATAAATGTTAATGCTATCTATTTTAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAGAGTTCCTATTTGTGGCATAAATGTTAATGCTATCTATTTTAT  341

seq1  GGCTGTAAACAATAACAAAACTAAACAGATAAAACATATCAGTCATCCAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTAAACAATAACAAAACTAAACAGATAAAACATATCAGTCATCCAA  391

seq1  TCATGACTTTATTTAATTGGAATACTTAAAGTTAATGATACTAGGTTAAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACTTTATTTAATTGGAATACTTAAAGTTAATGATACTAGGTTAAG  441

seq1  TCTTAAATTTTAATTTTACTCATGTAAACATGATTCAAAATTAGGGTTAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAATTTTAATTTTACTCATGTAAACATGATTCAAAATTAGGGTTAT  491

seq1  GCTGCAATGAGGTAAATATTGAATTACTAAGATCACAAAATAAATAATTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAATGAGGTAAATATTGAATTACTAAGATCACAAAATAAATAATTT  541

seq1  ATCTGGAGGAATATAGGATTACAATAAAAGTTATTAGTTGTTCAAATCCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGAGGAATATAGGATTACAATAAAAGTTATTAGTTGTTCAAATCCT  591

seq1  CTGGTGACTCTAATATATTGACTTCTATTTGATTGTGGAAACAACTGGCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGACTCTAATATATTGACTTCTATTTGATTGTGGAAACAACTGGCT  641

seq1  GAGTTGTAAGTGGGAGGCTGGTATAGTGGCATCCCTGTATTCCAAGTACT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTAAGTGGGAGGCTGGTATAGTGGCATCCCTGTATTCCAAGTACT  691

seq1  CAGGAAGCTAAGGCTGGAGGAGTGTCACTTCAAGGTCAGCCTGGGCTACT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGCTAAGGCTGGAGGAGTGTCACTTCAAGGTCAGCCTGGGCTACT  741

seq1  TTCAAGACACAGTCTGAAAAGAAAATATTGTGAGTTTGAAAATGTGTGTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGACACAGTCTGAAAAGAAAATATTGTGAGTTTGAAAATGTGTGTG  791

seq1  TTAGATGTTGGCATTTCATTCTTACAAATTAATGTGTAAATTGTAGACAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGTTGGCATTTCATTCTTACAAATTAATGTGTAAATTGTAGACAG  841

seq1  CTTATGGTAGTTTCTATTACACCCACTCTCCTCATCTTGGATCATCTGTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGGTAGTTTCTATTACACCCACTCTCCTCATCTTGGATCATCTGTT  891

seq1  TGGATCACCTGCTCTGCCTACTGGCAGCCCACACTCAGCCCACATTATCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCACCTGCTCTGCCTACTGGCAGCCCACACTCAGCCCACATTATCT  941

seq1  CAGGCCACATTACCTCAGGCCAACATGGCTTTTCTTTATTTAGCCTTCTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCACATTACCTCAGGCCAACATGGCTTTTCTTTATTTAGCCTTCTC  991

seq1  ATGCTGTGTCTTTACCTTCAGCTTGGAATTTATTTTAATAGATGATTCCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTGTCTTTACCTTCAGCTTGGAATTTATTTTAATAGATGATTCCT  1041

seq1  TCAGCTGGTGCACTCAACAATGATGGAATTGTCAGGACTAATAATACTTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGGTGCACTCAACAATGATGGAATTGTCAGGACTAATAATACTTA  1091

seq1  AACATGCTGCCTTCGAAATTCGGGTTATTACTTGGTTTAATACAGTTTCT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCTGCCTTCGAAATTCGGGTTATTACTTGGTTTAATACAGTTTCT  1141

seq1  TTTAAGGGTTGTTTTGTTTTGTTTTTATCACCAGAGAATTC  1186
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGGTTGTTTTGTTTTGTTTTTATCACCAGAGAATTC  1182

seq1: chr10_23857048_23857883
seq2: B6Ng01-086E07.g_399_1220

seq1  GGAGGTCCTTGATGCACTTGGACTTTGCACAAGTTGATAAGAATGCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTCCTTGATGCACTTGGACTTTGCACAAGTTGATAAGAATGCATCA  50

seq1  ATTTGCATTTTTCTACATGCTGACTGCCAGGTGAACCAGTACCCTTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATTTTTCTACATGCTGACTGCCAGGTGAACCAGTACCCTTTGTT  100

seq1  GAATATGCTGTCCTTTTTCCACTGGATGGTTTTAGCTTCTTTGTCAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGCTGTCCTTTTTCCACTGGATGGTTTTAGCTTCTTTGTCAAAGA  150

seq1  TCAAGTGACCATATGTGTGTGGGTTCATTTCTGGCTCTTCAATTCTATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGACCATATGTGTGTGGGTTCATTTCTGGCTCTTCAATTCTATTC  200

seq1  CATTGATCTACCTGTCTATCTCTGTACCAATACCATTCAGTTTTTATCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATCTACCTGTCTATCTCTGTACCAATACCATTCAGTTTTTATCAT  250

seq1  GATTGCTCTGTAGTACAGCTTGAGGTCAGGGATGGTGATTCCCCCAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCTCTGTAGTACAGCTTGAGGTCAGGGATGGTGATTCCCCCAGATG  300

seq1  TTCCTTTATTGTGGAGAATAGTTTTTGATATCCTGGGTTTTTTGTTATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTATTGTGGAGAATAGTTTTTGATATCCTGGGTTTTTTGTTATTC  350

seq1  CAAATGAATTTGAGAATTTCTCTTTTTACTCTATGAAGAATTGAGTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAATTTGAGAATTTCTCTTTTTACTCTATGAAGAATTGAGTTGGA  400

seq1  ATATTGATGGGGA-TTGTGCTGTATCTGTAGATTGC-TTTTGACAAGATG  448
      ||||||||||||| |||||||||||||||||||||| |||||||||||||
seq2  ATATTGATGGGGATTTGTGCTGTATCTGTAGATTGCTTTTTGACAAGATG  450

seq1  GGCATTTTTACTATATATACATATATATATATATATATATATATACATCG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTTTACTATATATACATATATATATATATATATATATATACATCG  500

seq1  CCATACATATACACACACACATATCATAATT-AAAACTCCAGTGCTGAAG  547
      ||||||||||||||||||||||||||||||| |||||| |||||||||||
seq2  CCATACATATACACACACACATATCATAATTAAAAACTTCAGTGCTGAAG  550

seq1  AAATTCAAAGAATAAAAAAAATTAGTAAAGATTCAAATTTTAAATTTCTT  597
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  AAATTCAAAGAATAAAAAAAATTAGTAAAGATTCAAATTTT-AATTTC-T  598

seq1  TTTTTACCAGAAACATCTTATTATCCACTAATTTCCATAATCAAACCCCA  647
      ||||||||||| ||||| ||||||||||||| ||||| ||||||||||||
seq2  TTTTTACCAGAGACATC-TATTATCCACTAA-TTCCAAAATCAAACCCCA  646

seq1  GGGGTATTCTTTGATTTCACAAGCACCAAGGAAAGGAAGGGACAGGGTGC  697
      |||||||||||||||||||| |||||| |||||| ||||||||||||| |
seq2  GGGGTATTCTTTGATTTCAC-AGCACC-AGGAAAAGAAGGGACAGGGT-C  693

seq1  AATGGTAACCCCCACCCACCCATTCTCACATGCTTCTGGATTCTGTCTCC  747
      ||||||||||||  |||| |||||||| ||||  ||| ||||  ||| ||
seq2  AATGGTAACCCCTCCCCA-CCATTCTC-CATGGCTCT-GATTTCGTC-CC  739

seq1  AGTTTGCTGATTTAATAACCCTAATCTAGGTGCCCCAGGTGGCTGCGCAT  797
      || ||||||  ||||||  || ||||  || ||| |||  |||||| || 
seq2  AG-TTGCTGGATTAATA--CCCAATCAGGGAGCCACAGCGGGCTGCCCAA  786

seq1  GGATTTGGAGGGGCTCTACCACGATGTGTCCTTTCCTTC  836
       || ||||  ||||||  |  |||||||||| |||||||
seq2  TGAATTGGGAGGGCTCAGC--CGATGTGTCC-TTCCTTC  822