BAC Information

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BAC

Clone NameB6Ng01-086N13
Chromosome10 (Build37)
Map Location 16,085,647 - 16,216,597
singlet/doubletdoublet
Overlap geneLOC382457
Upstream geneLOC637043, LOC100039492, LOC671439
Downstream geneLOC546472, LOC100039576, LOC627511
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086N13.bB6Ng01-086N13.g
ACCDH900136DH900137
length1,2311,157
definitionDH900136|Mus musculus domesticus DNA, BAC clone: B6Ng01-086N13, 5' end.DH900137|Mus musculus domesticus DNA, BAC clone: B6Ng01-086N13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,085,647 - 16,086,349)(16,215,411 - 16,216,597)
sequence
gaattctcacctgagaaataccaaatggctaagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaaaatcctgagatt
ccacctcacaccagtcagaatagctaagatcaaaaattcaggtgacatca
gatgctggcgaggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaagcttgtacaaccactctggaaatcagtcttgcggttcctcag
aaaattggacatagtactaccagaggatcccacaatacctctcctgggca
tatatccagaagatgccccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagcaggaaagaacccagatg
tccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttattaaattcctaggtaaa
tggatggacctggaggacatcatcctgagtgaggtaacccaatcgcaaaa
gaactcacatgacatgtactcactgataagtgaatattagcccagaaact
tagaataaccaagatatatgatacaatttgcgaaacacatgaaactcaag
aagaacgaagaccagtgtggacattgtgccccttcttagaactgggaaca
aaacacccatggaacgagttacagagacaaagtttggagctgagacaaaa
ggatggaccatctagagactgccatatctggggatccatcccataatcag
cttccaaacgctgacaccattgcatacattagcaagattttgctgaaagg
acccagatatagctgtctcttgtgagactatgccggggcctagccaatac
agaagtggatgctcacaatcagctattggatggatcatagggcccaaatg
gaggagctagagaaagtacccaaggaactaaagggatctgcaaccctata
ggtggaacaacaatatgaactaaccagtacccccttggagttcatgcctc
ctgtcatgttttctgtgcagcagaatggcttacactgggcctcaaatgcc
ccttggcataccacattgaaggattgagtagactctatgagcatcctagc
ctctatacccatgacatcatggaatgcgactttagctctacgacgatgat
gggcactagcttttgcctttagcatttatta
gaattcctgcagtctcaagtagttaaggacgaacagaatttcttcagtgc
caactggtatatgctttccccttccaacctcagaatgaggagggcttatt
gcatatcatcatatcttaagagcagaggcatattgttgatagctttaagt
gtagagagaaaatggaaagcattagaaagcattgattttccaactgagaa
tccatctcttcctatatgtgttgaattggttttctagaaataatagcaac
tcaaaacattgcattcattttaaccttcatatttccttcatatttccacc
ataagtggtttttttgttttttgtttttgtttttgttgttttactttgag
gattcaggtagtaagggttaatcaggggatgcataccagcgttgaggcat
ttgccttgtatggcactggccaaggagagtacttactgagactatgttcc
aggttcacactagtcagcacggaccaaattttgaactaaacaaagaagac
tcattgaggaagagtctgcatcagggttcacttatgatttagcctgttct
gtacttaggagagctgtcactgaagagtctgttttgagttcacgccactc
agcactttagacaagatcaaatgtttctctgtacccgagatcagcagaaa
ttttagacacactgaaaaaagcattttattgtcaaaagagagaatatatc
ctaaagtgacccagccttgggttctaggatatataacacagaggatggca
cagtcgaccttggtccatgtgccccgaggctcttccctggaactaaataa
acattttcagaatatgtttcagaaatgagatggaaacccttaagtcactt
aatcattttctaatagtctttggaaataattcagatagaatattgctaaa
gcttagaaaatttaaaacaaaatcatgtttgacccacttttgtttagatg
gatttttttaaatctctgctgacatcctgatagctttatactttgagcaa
cgatcaaaaaagatagtcatgatacattattttgagtctgaaagtagttt
atattattttgaaagatctaacatgtatgtttactgtggaacttcccata
aatgctatggagtgatatgatcaagtctgattccataaaattgagttagg
cagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_16085647_16086349
seq2: B6Ng01-086N13.b_598_1276

seq1  ACTCACATGACATGTACTCACTGATAAGTGAATATTAGCCCAGAAACTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACATGACATGTACTCACTGATAAGTGAATATTAGCCCAGAAACTTA  50

seq1  GAATAACCAAGATATATGATACAATTTGCGAAACACATGAAACTCAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACCAAGATATATGATACAATTTGCGAAACACATGAAACTCAAGAA  100

seq1  GAACGAAGACCAGTGTGGACATTGTGCCCCTTCTTAGAACTGGGAACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGAAGACCAGTGTGGACATTGTGCCCCTTCTTAGAACTGGGAACAAA  150

seq1  ACACCCATGGAACGAGTTACAGAGACAAAGTTTGGAGCTGAGACAAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCATGGAACGAGTTACAGAGACAAAGTTTGGAGCTGAGACAAAAGG  200

seq1  ATGGACCATCTAGAGACTGCCATATCTGGGGATCCATCCCATAATCAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACCATCTAGAGACTGCCATATCTGGGGATCCATCCCATAATCAGCT  250

seq1  TCCAAACGCTGACACCATTGCATACATTAGCAAGATTTTGCTGAAAGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACGCTGACACCATTGCATACATTAGCAAGATTTTGCTGAAAGGAC  300

seq1  CCAGATATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCCAATACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCCAATACAG  350

seq1  AAGTGGATGCTCACAATCAGCTATTGGATGGATCATAGGGCCCCAAATGG  400
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAGTGGATGCTCACAATCAGCTATTGGATGGATCATAGGG-CCCAAATGG  399

seq1  AGGAGCTAGAGAAAGTACCCAAGGAACTAAAGGGATCTGCAACCCTATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTAGAGAAAGTACCCAAGGAACTAAAGGGATCTGCAACCCTATAG  449

seq1  GTGGAACAACAATATGAACTAACCAGTA-CCCCTTGGAGTTCATGCCT-C  498
      |||||||||||||||||||||||||||| ||||||||||||||||||| |
seq2  GTGGAACAACAATATGAACTAACCAGTACCCCCTTGGAGTTCATGCCTCC  499

seq1  TGTCATGTTTTCTGTGCAGCAGAATGGCTTACACTGGGCCTCAATATGCC  548
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTCATGTTTTCTGTGCAGCAGAATGGCTTACACTGGGCCTCAA-ATGCC  548

seq1  CCCTTTGGCATACCACATTTGAAGGTATATGAGTAGACCTCTATGAGCAT  598
      ||  ||||||||||||| ||||||| || |||||||| ||||||||||||
seq2  CC--TTGGCATACCACA-TTGAAGG-AT-TGAGTAGA-CTCTATGAGCAT  592

seq1  CCCTAGCCTCTATTACCCCATGACCATCAT-GAATGCAGACATTTTAGC-  646
       ||||||||||||   ||||||| |||||| |||||| |||  |||||| 
seq2  -CCTAGCCTCTAT--ACCCATGA-CATCATGGAATGC-GAC--TTTAGCT  635

seq1  CTACTACCAGAAGGTATGATGGTGCAAACTAGCTTTTTGCCTTTTAGCAT  696
      |||| ||        ||||||| ||  |||||| ||||||| ||||||| 
seq2  CTACGAC-------GATGATGG-GC--ACTAGC-TTTTGCC-TTTAGCA-  672

seq1  TTTATTA  703
      |||||||
seq2  TTTATTA  679

seq1: chr10_16215411_16216597
seq2: B6Ng01-086N13.g_67_1223 (reverse)

seq1  CTCTCTGGCCCCTACTCAAATATTTTATGGACATTTAGAAACCCTGGATC  50
      |||||||  ||  |||||   |||||||||  | | |||    || ||||
seq2  CTCTCTG--CCTAACTCA---ATTTTATGG--AATCAGA----CTTGATC  39

seq1  ATATCACTTCATAGCATTTTATGGGAAAGTATTCACAAGTAAAACATACA  100
      |||||||| ||||||| |||||||| |||| | ||| ||| |||||||||
seq2  ATATCACTCCATAGCA-TTTATGGG-AAGT-TCCAC-AGT-AAACATACA  84

seq1  TGTTTAGAATCTTTTAAAAATAATATTAAACTAACTTTCAGACTCAAAAT  150
      || |||| ||| ||| ||||||||| |||||| |||||||||||||||||
seq2  TG-TTAG-ATC-TTTCAAAATAATA-TAAACT-ACTTTCAGACTCAAAAT  129

seq1  AATGTATCCAATGACTATCTTTTTTGATTCGTTTGCTTCAAAGTATAAAG  200
      ||||||||  ||||||||||||||||| ||| |||| |||||||||||||
seq2  AATGTATC--ATGACTATCTTTTTTGA-TCG-TTGC-TCAAAGTATAAAG  174

seq1  CTATCAGGATTGTCAGCAAGAGATTTAAAAAAAATCCATCTAAACAAAAA  250
      ||||||||| ||||||| |||||||| |||||||||||||||||| ||||
seq2  CTATCAGGA-TGTCAGC-AGAGATTT-AAAAAAATCCATCTAAAC-AAAA  220

seq1  GTGGGTCAAACATGATTTTGTTTTAAATTTTCTAAGCTTTAGCAATATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTCAAACATGATTTTGTTTTAAATTTTCTAAGCTTTAGCAATATTC  270

seq1  TATCTGAATTATTTCCAAAGACTATTAGAAAATGATTAAGTGACTTAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGAATTATTTCCAAAGACTATTAGAAAATGATTAAGTGACTTAAGG  320

seq1  GTTTCCATCTCATTTCTGAAACATATTCTGAAAATGTTTATTTAGTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCATCTCATTTCTGAAACATATTCTGAAAATGTTTATTTAGTTCCA  370

seq1  GGGAAGAGCCTCGGGGCACATGGACCAAGGTCGACTGTGCCATCCTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAGCCTCGGGGCACATGGACCAAGGTCGACTGTGCCATCCTCTGT  420

seq1  GTTATATATCCTAGAACCCAAGGCTGGGTCACTTTAGGATATATTCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATATCCTAGAACCCAAGGCTGGGTCACTTTAGGATATATTCTCTC  470

seq1  TTTTGACAATAAAATGCTTTTTTCAGTGTGTCTAAAATTTCTGCTGATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACAATAAAATGCTTTTTTCAGTGTGTCTAAAATTTCTGCTGATCT  520

seq1  CGGGTACAGAGAAACATTTGATCTTGTCTAAAGTGCTGAGTGGCGTGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTACAGAGAAACATTTGATCTTGTCTAAAGTGCTGAGTGGCGTGAAC  570

seq1  TCAAAACAGACTCTTCAGTGACAGCTCTCCTAAGTACAGAACAGGCTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACAGACTCTTCAGTGACAGCTCTCCTAAGTACAGAACAGGCTAAA  620

seq1  TCATAAGTGAACCCTGATGCAGACTCTTCCTCAATGAGTCTTCTTTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGTGAACCCTGATGCAGACTCTTCCTCAATGAGTCTTCTTTGTTT  670

seq1  AGTTCAAAATTTGGTCCGTGCTGACTAGTGTGAACCTGGAACATAGTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAAATTTGGTCCGTGCTGACTAGTGTGAACCTGGAACATAGTCTC  720

seq1  AGTAAGTACTCTCCTTGGCCAGTGCCATACAAGGCAAATGCCTCAACGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTACTCTCCTTGGCCAGTGCCATACAAGGCAAATGCCTCAACGCT  770

seq1  GGTATGCATCCCCTGATTAACCCTTACTACCTGAATCCTCAAAGTAAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGCATCCCCTGATTAACCCTTACTACCTGAATCCTCAAAGTAAAAC  820

seq1  AACAAAAACAAAAACAAAAAACAAAAAAACCACTTATGGTGGAAATATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAACAAAAACAAAAAACAAAAAAACCACTTATGGTGGAAATATGA  870

seq1  AGGAAATATGAAGGTTAAAATGAATGCAATGTTTTGAGTTGCTATTATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATATGAAGGTTAAAATGAATGCAATGTTTTGAGTTGCTATTATTT  920

seq1  CTAGAAAACCAATTCAACACATATAGGAAGAGATGGATTCTCAGTTGGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAACCAATTCAACACATATAGGAAGAGATGGATTCTCAGTTGGAA  970

seq1  AATCAATGCTTTCTAATGCTTTCCATTTTCTCTCTACACTTAAAGCTATC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATGCTTTCTAATGCTTTCCATTTTCTCTCTACACTTAAAGCTATC  1020

seq1  AACAATATGCCTCTGCTCTTAAGATATGATGATATGCAATAAGCCCTCCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATATGCCTCTGCTCTTAAGATATGATGATATGCAATAAGCCCTCCT  1070

seq1  CATTCTGAGGTTGGAAGGGGAAAGCATATACCAGTTGGCACTGAAGAAAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGAGGTTGGAAGGGGAAAGCATATACCAGTTGGCACTGAAGAAAT  1120

seq1  TCTGTTCGTCCTTAACTACTTGAGACTGCAGGAATTC  1187
      |||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCGTCCTTAACTACTTGAGACTGCAGGAATTC  1157