BAC Information

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BAC

Clone NameB6Ng01-088D10
Chromosome10 (Build37)
Map Location 67,447,293 - 67,620,772
singlet/doubletdoublet
Overlap genePlekhk1, Arid5b
Upstream geneReep3, Jmjd1c, Nrbf2, Egr2, Gm237, LOC100040081, LOC100039618, Zfp365
Downstream geneLOC100040136, 1700040L02Rik, EG665342, Tmem26
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088D10.bB6Ng01-088D10.g
ACCDH901132DH901133
length1,1351,143
definitionDH901132|Mus musculus domesticus DNA, BAC clone: B6Ng01-088D10, 5' end.DH901133|Mus musculus domesticus DNA, BAC clone: B6Ng01-088D10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,447,293 - 67,448,448)(67,619,629 - 67,620,772)
sequence
gaattctagaaatagcttctgcatatgccttatttccttaagggacgtta
acttagtctcatgcgtaagcttttgtttgttttgatttaagactttgagg
ttcttatcccttccatttcccaatcctctgtaatcaccgaagtctttttc
agctggggaagaaaatgcacttcccagatagatggaggccctgaagccca
ggctaatgtgtagtgtggccgtggccccctgctggttacttcaggttatt
gcaaccttaaatctttggatttcactgtccacagtagcagtccacctgct
attttgaacgctagagtggtggttctcaaccttcctaacgctgcgacgct
ttaatacagtgcctcacattgagatgacaacccccccccagtgtaaaata
attttgttgctacttcagaactgtcatttggctaccgttatgaattggta
taaaaaaaatgaacaaaatacctgatatgtgacccccaaaggggtctcca
ccccacattagaagaccgtttaaaaaaatgctcttcccgtctccaaagac
ctaattggatgggtcaggaactttaataaggttctttccgtgtgcctcag
ttggttctcggatgtagccagcttttcagaacctctgcgccagctcaatc
agctgtctcgttgcttcgtttaaaaggcaaagctgaactccgaggcacca
gatggcatttatttatattggctctgtggggtaaagcggctcatcccagc
ttccagtcgctcccggtgtgcacttaccagcgctaaccagcctgccgccg
tctaccgtctatcactgtagacatgtgggtcacgtagatggttcttagaa
ctgattgctgatgatgtgaaaggagaaacgacattggggcttgcaagtca
tccatagatgacgtcgagttggtggaaggcagtcatggtcaaagaaggag
tgcagcaggacagcgttggtagagtaccccagctgagtcagcacatacta
catgacagttagcctgtgacgattccatgtgtgtacagacgtaataaaca
gatctgttctcctcaagtgaatagctcagccgatagcttgagagtcaagt
caacatctaccatttgcttcggggtccgccataga
gaattcagtggcactgtcctggacagattcacatggctatctttaaaagg
ggcttgaaatggggtagatttggggtcatttttctaatggctctttaggg
aaaggggatccagatttgtctgcctgccttgattcattttcggtttctcc
acgagcctggtcattaggactgttcaagcccattggtgtctgctgcctaa
aatgagctaggtgacctgcatcgccatgtctcctgcaagagcagccggat
attacaacagaggagtaattaaaagaacataccaaagacagatgtctctc
atgcatgccactacatgctacgaaacggaggagccacaccacagctcccg
tatttacacaaagccctgaagttgtctgtgtctaaggaaacaagccaact
catgcaggctgacccccaggggccatcagagctaaagtccatgggaagct
tatttgcatttaaatggcaaattggaaacatttttcgaagatagttgatg
aacatattccaaaatggctttcattaaataggagcccaagatgtgaattt
gcatagatggtgctggccttgtaaattctcccgtgctccttgggaaaaaa
acagctgagaagcaacaagttggctgcctaataaggcccctaacggactt
ccttctcaggactttagagaggtatagacgctagctggctcatttacctc
ttgctgcgtctttcctccatcccccaactgagcctatggaccacctggcc
aggcagaacaccaaagagagtggcccaaggctttcctctccctcacgaat
ttgaagcatatgacttgtgagtcaatacaggtgacagggtcagtttgtct
gtccactcacacataatccaattgagatttatgggttatcagctatgtcc
ttgtgtggaattctacataaggaaaggaccagcgggccgtagtaccataa
agaacacaacccccgtgctactttcaaggagctcgcattcagggtgggga
acttgcaattacagtgccgtactgttgataataccatcccggagcaagtt
gattctttcttatagcttcggcagaacgagaagatagttttacttttggt
tttttattttccttgcatatttactgggacctccggtaacagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_67447293_67448448
seq2: B6Ng01-088D10.b_45_1179

seq1  GAATTCTAGAAATAGCTTCTGCATATGCCTTATTTCCTTAAGGGACGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAAATAGCTTCTGCATATGCCTTATTTCCTTAAGGGACGTTA  50

seq1  ACTTAGTCTCATGCGTAAGCTTTTGTTTGTTTTGATTTAAGACTTTGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTCTCATGCGTAAGCTTTTGTTTGTTTTGATTTAAGACTTTGAGG  100

seq1  TTCTTATCCCTTCCATTTCCCAATCCTCTGTAATCACCGAAGTCTTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATCCCTTCCATTTCCCAATCCTCTGTAATCACCGAAGTCTTTTTC  150

seq1  AGCTGGGGAAGAAAATGCACTTCCCAGATAGATGGAGGCCCTGAAGCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGGAAGAAAATGCACTTCCCAGATAGATGGAGGCCCTGAAGCCCA  200

seq1  GGCTAATGTGTAGTGTGGCCGTGGCCCCCTGCTGGTTACTTCAGGTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAATGTGTAGTGTGGCCGTGGCCCCCTGCTGGTTACTTCAGGTTATT  250

seq1  GCAACCTTAAATCTTTGGATTTCACTGTCCACAGTAGCAGTCCACCTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTTAAATCTTTGGATTTCACTGTCCACAGTAGCAGTCCACCTGCT  300

seq1  ATTTTGAACGCTAGAGTGGTGGTTCTCAACCTTCCTAACGCTGCGACGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAACGCTAGAGTGGTGGTTCTCAACCTTCCTAACGCTGCGACGCT  350

seq1  TTAATACAGTGCCTCACATTGAGATGACAACCCCCCCCCAGTGTAAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACAGTGCCTCACATTGAGATGACAACCCCCCCCCAGTGTAAAATA  400

seq1  ATTTTGTTGCTACTTCAGAACTGTCATTTGGCTACCGTTATGAATTGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTGCTACTTCAGAACTGTCATTTGGCTACCGTTATGAATTGGTA  450

seq1  TAAAAAAAATGAACAAAATACCTGATATGTGACCCCCAAAGGGGTCTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAATGAACAAAATACCTGATATGTGACCCCCAAAGGGGTCTCCA  500

seq1  CCCCACATTAGAAGACCGTTTAAAAAAATGCTCTTCCCGTCTCCAAAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACATTAGAAGACCGTTTAAAAAAATGCTCTTCCCGTCTCCAAAGAC  550

seq1  CTAATTGGATGGGTCAGGAACTTTAATAAGGTTCTTTCCGTGTGCCTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTGGATGGGTCAGGAACTTTAATAAGGTTCTTTCCGTGTGCCTCAG  600

seq1  TTGGTTCTCGGATGTAGCCAGCTTTTCAGAACCTCTGCGCCAGCTCAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTCTCGGATGTAGCCAGCTTTTCAGAACCTCTGCGCCAGCTCAATC  650

seq1  AGCTGTCTCGTTGCTTCGTTTAAAAGGCAAAGCTGAACTCCGAGGCACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCTCGTTGCTTCGTTTAAAAGGCAAAGCTGAACTCCGAGGCACCA  700

seq1  GATGGCATTTATTTATATTGGCTCTGTGGGGTAAAGCGGCTCATCCCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCATTTATTTATATTGGCTCTGTGGGGTAAAGCGGCTCATCCCAGC  750

seq1  TTCCAGTCGCTCCCGGTGTGCACTTACCAGCGCTAACCAGCCTGCCGCCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTCGCTCCCGGTGTGCACTTACCAGCGCTAACCAGCCTGCCGCCG  800

seq1  TCTACCGTCTATCACTGTAGACATGTGGGTCACGTAGATGGTTCTTAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCGTCTATCACTGTAGACATGTGGGTCACGTAGATGGTTCTTAGAA  850

seq1  CTGATTGCTGATGATGTGAAAGGAGAAACGACATTGGGGCTTGCAAGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGCTGATGATGTGAAAGGAGAAACGACATTGGGGCTTGCAAGTCA  900

seq1  TCCATAGATGACGTCGGAGTTGGTGGAAGGCAGTCATGGTCAAAGAAAGG  950
      ||||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  TCCATAGATGACGTC-GAGTTGGTGGAAGGCAGTCATGGTCAAAG-AAGG  948

seq1  AGTGCAGCAAGGGACAGCGTTGGTAGAGTACCCCAGCTTGAGTCAGCACA  1000
      |||||||||  |||||||||||||||||||||||||| ||||||||||||
seq2  AGTGCAGCA--GGACAGCGTTGGTAGAGTACCCCAGC-TGAGTCAGCACA  995

seq1  TACTACATGACAAGGTTAGCCTGTGACGATTCCATGTTGTGGTAACAGAA  1050
      ||||||||||||  |||||||||||||||||||||| ||||   |||| |
seq2  TACTACATGACA--GTTAGCCTGTGACGATTCCATG-TGTG--TACAG-A  1039

seq1  GGTAATTAAACAGATCTGTTCT-CTCATGTGAATAGCTCAGCCGATTAGG  1099
       |||| |||||||||||||||| |||| ||||||||||||||||||   |
seq2  CGTAA-TAAACAGATCTGTTCTCCTCAAGTGAATAGCTCAGCCGAT--AG  1086

seq1  CTTGGAGAGTCAAGTCAAACCATCTAACATTTTGCTTTCGGGGGTAACCG  1149
      ||| ||||||||||||||  |||||| || ||||| |||||||    |||
seq2  CTT-GAGAGTCAAGTCAA--CATCTACCA-TTTGC-TTCGGGG---TCCG  1128

seq1  CCATAGA  1156
      |||||||
seq2  CCATAGA  1135

seq1: chr10_67619629_67620772
seq2: B6Ng01-088D10.g_72_1214 (reverse)

seq1  CCTGTTACGTGA-GTTCCAGTAAAATATGCAAGGGGAAAATAAAAAACAA  49
      ||||||||  || || ||||| ||||||||||  |||||||||||||| |
seq2  CCTGTTACCGGAGGTCCCAGT-AAATATGCAA--GGAAAATAAAAAACCA  47

seq1  AAGTTAAAACTATCTTCTCTGTCTGCCGAAGCTGACAGGAAGGATTCACT  99
      ||  |||||||||||||||  |||||||||||| | | ||| || |||  
seq2  AAAGTAAAACTATCTTCTCGTTCTGCCGAAGCT-ATAAGAAAGAATCAAC  96

seq1  TTGCTCCGGGATGGTATTTATTCACAGTTC-GCACTGTAATTTGCAAG-T  147
      |||||||||||||||| ||||  ||||| | ||||||||| ||||||| |
seq2  TTGCTCCGGGATGGTA-TTATCAACAGTACGGCACTGTAA-TTGCAAGTT  144

seq1  CCCCACCCTGGAATGCGAGCTCC-TGGAAGTAGCAC-GGGGTTGTGTTCT  195
      ||||||||| ||||||||||||| || ||||||||| |||||||||||||
seq2  CCCCACCCT-GAATGCGAGCTCCTTGAAAGTAGCACGGGGGTTGTGTTCT  193

seq1  TTATTGTACTACGGCCCGCTGGTTCATTTCCTTATGTAGGATTCCACACA  245
      |||| ||||||||||||||||| || ||||||||||||| ||||||||||
seq2  TTATGGTACTACGGCCCGCTGG-TCCTTTCCTTATGTAGAATTCCACACA  242

seq1  AGGACATAGCTGATAACCCATAAATCTCAATTGGATTATGTGTGAGTGGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATAGCTGATAACCCATAAATCTCAATTGGATTATGTGTGAGTGGA  292

seq1  CAGACAAACTGACCTTGTCACCTGTATTGACTCACAAGTCATATGCT--C  343
      |||||||||||||| ||||||||||||||||||||||||||||||||   
seq2  CAGACAAACTGACCCTGTCACCTGTATTGACTCACAAGTCATATGCTTCA  342

seq1  AATTCGTGAGGGAGAGGAAAGCCTTGGGCCACTCTCTTTGGTGTTCTGCC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCGTGAGGGAGAGGAAAGCCTTGGGCCACTCTCTTTGGTGTTCTGCC  392

seq1  TGGCCAGGTGGTCCATAGGCTCAGTTGGGGGATGGAGGAAAGACGCAGCA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGGTGGTCCATAGGCTCAGTTGGGGGATGGAGGAAAGACGCAGCA  442

seq1  AGAGGTAAATGAGCCAGCTAGCGTCTATACCTCTCTAAAGTCCTGAGAAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAAATGAGCCAGCTAGCGTCTATACCTCTCTAAAGTCCTGAGAAG  492

seq1  GAAGTCCGTTAGGGGCCTTATTAGGCAGCCAACTTGTTGCTTCTCAGCTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCCGTTAGGGGCCTTATTAGGCAGCCAACTTGTTGCTTCTCAGCTG  542

seq1  TTTTTTTCCCAAGGAGCACGGGAGAATTTACAAGGCCAGCACCATCTATG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCCCAAGGAGCACGGGAGAATTTACAAGGCCAGCACCATCTATG  592

seq1  CAAATTCACATCTTGGGCTCCTATTTAATGAAAGCCATTTTGGAATATGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCACATCTTGGGCTCCTATTTAATGAAAGCCATTTTGGAATATGT  642

seq1  TCATCAACTATCTTCGAAAAATGTTTCCAATTTGCCATTTAAATGCAAAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAACTATCTTCGAAAAATGTTTCCAATTTGCCATTTAAATGCAAAT  692

seq1  AAGCTTCCCATGGACTTTAGCTCTGATGGCCCCTGGGGGTCAGCCTGCAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCCCATGGACTTTAGCTCTGATGGCCCCTGGGGGTCAGCCTGCAT  742

seq1  GAGTTGGCTTGTTTCCTTAGACACAGACAACTTCAGGGCTTTGTGTAAAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGCTTGTTTCCTTAGACACAGACAACTTCAGGGCTTTGTGTAAAT  792

seq1  ACGGGAGCTGTGGTGTGGCTCCTCCGTTTCGTAGCATGTAGTGGCATGCA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGAGCTGTGGTGTGGCTCCTCCGTTTCGTAGCATGTAGTGGCATGCA  842

seq1  TGAGAGACATCTGTCTTTGGTATGTTCTTTTAATTACTCCTCTGTTGTAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGACATCTGTCTTTGGTATGTTCTTTTAATTACTCCTCTGTTGTAA  892

seq1  TATCCGGCTGCTCTTGCAGGAGACATGGCGATGCAGGTCACCTAGCTCAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCGGCTGCTCTTGCAGGAGACATGGCGATGCAGGTCACCTAGCTCAT  942

seq1  TTTAGGCAGCAGACACCAATGGGCTTGAACAGTCCTAATGACCAGGCTCG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCAGCAGACACCAATGGGCTTGAACAGTCCTAATGACCAGGCTCG  992

seq1  TGGAGAAACCGAAAATGAATCAAGGCAGGCAGACAAATCTGGATCCCCTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAACCGAAAATGAATCAAGGCAGGCAGACAAATCTGGATCCCCTT  1042

seq1  TCCCTAAAGAGCCATTAGAAAAATGACCCCAAATCTACCCCATTTCAAGC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAAAGAGCCATTAGAAAAATGACCCCAAATCTACCCCATTTCAAGC  1092

seq1  CCCTTTTAAAGATAGCCATGTGAATCTGTCCAGGACAGTGCCACTGAATT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTAAAGATAGCCATGTGAATCTGTCCAGGACAGTGCCACTGAATT  1142

seq1  C  1144
      |
seq2  C  1143