BAC Information

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BAC

Clone NameB6Ng01-089E17
Chromosome10 (Build37)
Map Location 91,339,043 - 91,339,946
singlet/doubletsinglet
Overlap genenone
Upstream geneAnks1b, Apaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream geneLOC100041799, LOC667203, LOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089E17.bB6Ng01-089E17.g
ACCDH901909DH901910
length8751,250
definitionDH901909|Mus musculus domesticus DNA, BAC clone: B6Ng01-089E17, 5' end.DH901910|Mus musculus domesticus DNA, BAC clone: B6Ng01-089E17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttatggaacagttcattttgctgacaaattctgggttcaggtc
tgcttacagtggtccattctgttttaagtacttctttcttattttaaatt
tagatattttcttcatttacatttcaaattctatccccaaagccccctat
accctccccgcaccctgctccccaacccacccactcccacttcccagccc
tggcattcccctgtactggtgcatatgatcttcacaagaccaagggccac
tcctcccattgatggccaactaggccatcctctgctacatatgcaactag
agacacagctctgggagttactggttagttcatattgttaagcacaaaga
aaacctgtcctttggcttacttcagctttctctgggcagtggaaatagct
ctggttgaataggcttgttattatttaggagctgtgaagcctgaggacca
caaaatcatgacaactgaaaggacactgaaatgcctccagagagagagag
agagagagagagagagagagagttagagattgaaacagagacatacagca
gagatagagaagcagagacagagacacagagacagacagatagacagaca
gacagacaggcatgatgaatgaatgaatgaatgaatgaatgaatgaatga
tgaatatatgaatggcagagcatagaggaaatatcagttcagttattatg
gtgacaagttcttcatgatgcttctgtgagaatatgatatcagataaaac
tatgggttcatagcttagactagcacagtatatttcagcacaatctaggc
caggagggctgctctgttaataaatagcccacttggcattataaaacagt
ttatgtagctagtataggtgataaa
gaattcccccaccccccacagcacctgacctctaaactccctggggcttc
cagtctcttgaatattaggtgcatcatctctgaatgaacacagaaccagc
agtactctactgtatgtgtgttggggacctcacatcagctggtatatcct
gcctgttggtgttccagtatctgagagatcccaggagtccagattcattg
agattggtggtcctcctacaggatcactcttcttctcagcttctctcagc
ctttcttaattcaacaacaagggtcagctacttctgtccattgattgggt
gcaaatatctgcatccgaatctttcagctgcttgttgggtctttcagagg
gcagtcatgataggtccctttttgtgatcactccatagcctcagtaatag
tgtcaggccctggggccttcccttgagacgagtcccactttgggcctgtt
gctggacattctttttccatccctgtaattttttcagacaggaacaatta
tgggtcagagatgtgactgttgggtggtaaccccatcgctcacttgatat
cctgtcttcctgctggaggtgggctctataaattccctctacctattgct
gggcatttcttctaaggtccctccctttgtgtcctggaattctctcaccc
cccaggtctctggtgcattctgggggttttccccaacctcctatttcctg
aggttccctgtttacattctttctacaggccttcaggtcttcagtccttt
tccctcatccaataccagatcatgttcccctcttcccccttctctcctac
cctaacttcccctcccaggtcccttcctccctctccacttgtgattgctt
tcttctctctcccaagtgggactaaggcgtcctcacttgggcacttgagc
ttgaagaatggatacagaaaatgtggttctttatacaatggaatactact
cggcaattaagaacaagaacgtcctgagttttgcaggcaatggatagaac
tagagaatttcatcctgagttcatcttgagtgaggttactcagacccaaa
ggactatgcatggccatatctctaccataagtggatattagtcaaacaac
aacaaacaaacaataccaaaacaaacaaacaaacaaccccccaacaaact
aacaaacaaaccttagaattcagatctaaagcctctcatatactttagag
cactaatagtagaaaatcttttcacaagtgctcagaaccgtagcactcat

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91339043_91339946
seq2: B6Ng01-089E17.b_45_919 (reverse)

seq1  TTTATCAACACTAATACTTAGCTACTATAAACCTGTTTTAATAATGCCAA  50
      |||||   |||  |||| ||||||| ||||| ||||||| ||||||||||
seq2  TTTAT---CACCTATAC-TAGCTAC-ATAAA-CTGTTTT-ATAATGCCAA  43

seq1  GGTTGGGGCTATTATATAACCAGAGGCAGCCCTCCTGGGCCTAGGATTGT  100
      |    |||||||| ||| | |||| ||||||||||| |||||| ||||||
seq2  G---TGGGCTATT-TATTAACAGA-GCAGCCCTCCT-GGCCTA-GATTGT  86

seq1  GCTGAAATTAATTACTGTGCTAGGTCCTAAGCTTATGAACCCATAGTTTT  150
      ||||||||    |||||||||||   |||||| ||||||||||||| |||
seq2  GCTGAAAT---ATACTGTGCTAG--TCTAAGC-TATGAACCCATAG-TTT  129

seq1  TATCTTGATATCATATTCTCACAGGAAGCATCATGAAGGACCTTGGTCAC  200
      |||| |||||||||||||||||| |||||||||||||| ||  | |||||
seq2  TATC-TGATATCATATTCTCACA-GAAGCATCATGAAGAAC--TTGTCAC  175

seq1  CATAATAAACCTGAACTGATATTTCCTCCTATGCTCTGCCATTCATATAT  250
      ||||||||  ||||||||||||||||| ||||||||||||||||||||||
seq2  CATAATAA--CTGAACTGATATTTCCT-CTATGCTCTGCCATTCATATAT  222

seq1  TCATTCATTCATTCATTCATTCATTCATTCATTCATTCATCATGCCTGTC  300
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCA-TCATTCATTCATTCATTCATTCATTCATTCATTCATCATGCCTGTC  271

seq1  TGTCTGTCTGTCTATCTGTCTGTCTCTGTGTCTCTGTCTCTGCTTCTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTGTCTATCTGTCTGTCTCTGTGTCTCTGTCTCTGCTTCTCTA  321

seq1  TCTCTGCTGTATGTCTCTGTTTCAATCTCTAACTCTCTCTCTCTCTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCTGTATGTCTCTGTTTCAATCTCTAACTCTCTCTCTCTCTCTCT  371

seq1  CTCTCTCTCTCTCTCTGGAGGCATTTCAGTGTCCTTTCAGTTGTCATGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTGGAGGCATTTCAGTGTCCTTTCAGTTGTCATGAT  421

seq1  TTTGTGGTCCTCAGGCTTCACAGCTCCTAAATAATAACAAGCCTATTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGTCCTCAGGCTTCACAGCTCCTAAATAATAACAAGCCTATTCAA  471

seq1  CCAGAGCTATTTCCACTGCCCAGAGAAAGCTGAAGTAAGCCAAAGGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCTATTTCCACTGCCCAGAGAAAGCTGAAGTAAGCCAAAGGACAG  521

seq1  GTTTTCTTTGTGCTTAACAATATGAACTAACCAGTAACTCCCAGAGCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTTGTGCTTAACAATATGAACTAACCAGTAACTCCCAGAGCTGT  571

seq1  GTCTCTAGTTGCATATGTAGCAGAGGATGGCCTAGTTGGCCATCAATGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTAGTTGCATATGTAGCAGAGGATGGCCTAGTTGGCCATCAATGGG  621

seq1  AGGAGTGGCCCTTGGTCTTGTGAAGATCATATGCACCAGTACAGGGGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGGCCCTTGGTCTTGTGAAGATCATATGCACCAGTACAGGGGAAT  671

seq1  GCCAGGGCTGGGAAGTGGGAGTGGGTGGGTTGGGGAGCAGGGTGCGGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGCTGGGAAGTGGGAGTGGGTGGGTTGGGGAGCAGGGTGCGGGGA  721

seq1  GGGTATAGGGGGCTTTGGGGATAGAATTTGAAATGTAAATGAAGAAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATAGGGGGCTTTGGGGATAGAATTTGAAATGTAAATGAAGAAAATA  771

seq1  TCTAAATTTAAAATAAGAAAGAAGTACTTAAAACAGAATGGACCACTGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATTTAAAATAAGAAAGAAGTACTTAAAACAGAATGGACCACTGTA  821

seq1  AGCAGACCTGAACCCAGAATTTGTCAGCAAAATGAACTGTTCCATAAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACCTGAACCCAGAATTTGTCAGCAAAATGAACTGTTCCATAAAGA  871

seq1  ATTC  904
      ||||
seq2  ATTC  875