BAC Information

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BAC

Clone NameB6Ng01-091P15
Chromosome10 (Build37)
Map Location 102,527,652 - 102,528,844
singlet/doubletsinglet
Overlap geneLrriq1
Upstream geneMgat4c, LOC667652, Nts, Pamci, LOC382413, Cart1
Downstream geneLOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091P15.bB6Ng01-091P15.g
ACCDH903864DH903865
length1,175979
definitionDH903864|Mus musculus domesticus DNA, BAC clone: B6Ng01-091P15, 5' end.DH903865|Mus musculus domesticus DNA, BAC clone: B6Ng01-091P15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagccataaaacatagaaaatcacatttaaagttaaatgtaaca
gtaacacatgatttcacaaaactggcatccaacagcttaaatttaaacat
gcagaatttttttgtcttatttcatggaagacaatgatcccgacaggtgg
gatgctgacagctttctcctacaaaacctaggaatcatataccgagactc
aatccatgcctgccagtgaatatggtatagcccatagattattaatattt
aaatactatatccaaaatgttggctttggccctgttctatccactaaatc
tatgtgtctatgtatctatgtatctatttcttttctactgtatagtttct
gttactggaatatgatgaattttccaaaaggctcatgtttagcttggtct
gagatagtagacctagtcttcagtgattggatcatgaggcctcacagaat
ctgtggcttaatccactcattaactggaaatctgttggaataattgggag
atggaaaaaattggagggtgggcaacttaaagggagaagtaggtcactgg
ggggccgtttcttgtcctgggggctccttcatgtttctctctctctctta
cctgctatcacacataattccagaaatgcagaccctagtgactatggact
ggaattgctgaaacagtgaggtttccttcattaaaattttctttcatgta
tttgccacagtaacataaacatagactgaacacaaaaaaattacttctgt
agcatttcctctgaatccacagtttctaggcccctggtaaacactgaaga
tgacaagtcacatatgtcaaatgataaaatgcttacatgtaacttacaga
atccatccctacagtttaaacatcaatacattactagtaacaacgaatac
atataaatgccatgtgggtagatgtcatagtatgttgtgtagcggcatgc
aaaagaatcatttacaacttcagtacacagtgtattttcccaaatatctt
cttttgtattttaagtcagcatatgagttcaatgaattataaaggaatag
cttgttcttaaagcatgtacctaacccaccattaaatattatgttactaa
agtatttgtaaatatcatacgttatatggataacacctaatttatataat
atataagggaatctatccaatattt

gaattccagaatacatagaaaagacaaggggtaaggtggaggggagaagg
gtagggatggaaatgatctgaatattctctgttttcctcatcatggccct
cttctccttgttggcttgttgccccacaggtgctataaatcaatggaggg
ctcatgactgcttctttattaatgctcacaggactgggctcctgtggtct
gctggtgtatactctgcccctccattgggatggtgctcccttacccacac
cccctggatgaggagatgcataacaaagcaagacttctggggtgtgagct
caggggcttgaacaacgccacgtcggctgcattctgcattcaagaaaaaa
aaaaaatcactaagctggctccgtaagaacacaggaattaacggttggtg
ggaagcccccaagtggaaggcggcatgggaggatctgcaaaccgataccc
taactgaaaaataacagagataggcaagctgggagacagatacatttgga
acccctttggcaagctcattcacagcaatcatgagttctctttactgtgc
atgtgctatctcaaccacgcattgctgttggctatcaaaaaatcacggga
actcaagggactctgcctgtggttcatcttcctctaggaaccagaggctc
tcacccctttgatgagatacatcacgtcgcctgtggattcttctgccctg
ctaccacttcctaatctcctcctggcatggccccccatacgcgtaattct
attccaaccatagcatgatatcaaattcgatcaatcatcattttacttgt
gatcttttgtgattgttatgtcgggccctgacaagatgactccaagagca
ggagtttgagagtctcaggagaagcagttagaagttctgtcttttcatgc
tgagatccctgctctccttaatatgggggcgatgctgcatgtcccgtcct
tgtccgcttctctgaggcgcttgttttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_102527652_102528844
seq2: B6Ng01-091P15.b_47_1221

seq1  GAATTCAAGCCATAAAACATAGAAAATCACATTTAAAGTTAAATGTAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCCATAAAACATAGAAAATCACATTTAAAGTTAAATGTAACA  50

seq1  GTAACACATGATTTCACAAAACTGGCATCCAACAGCTTAAATTTAAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACATGATTTCACAAAACTGGCATCCAACAGCTTAAATTTAAACAT  100

seq1  GCAGAATTTTTTTGTCTTATTTCATGGAAGACAATGATCCCGACAGGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATTTTTTTGTCTTATTTCATGGAAGACAATGATCCCGACAGGTGG  150

seq1  GATGCTGACAGCTTTCTCCTACAAAACCTAGGAATCATATACCGAGACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGACAGCTTTCTCCTACAAAACCTAGGAATCATATACCGAGACTC  200

seq1  AATCCATGCCTGCCAGTGAATATGGTATAGCCCATAGATTATTAATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATGCCTGCCAGTGAATATGGTATAGCCCATAGATTATTAATATTT  250

seq1  AAATACTATATCCAAAATGTTGGCTTTGGCCCTGTTCTATCCACTAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTATATCCAAAATGTTGGCTTTGGCCCTGTTCTATCCACTAAATC  300

seq1  TATGTGTCTATGTATCTATGTATCTATTTCTTTTCTACTGTATAGTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTCTATGTATCTATGTATCTATTTCTTTTCTACTGTATAGTTTCT  350

seq1  GTTACTGGAATATGATGAATTTTCCAAAAGGCTCATGTTTAGCTTGGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGGAATATGATGAATTTTCCAAAAGGCTCATGTTTAGCTTGGTCT  400

seq1  GAGATAGTAGACCTAGTCTTCAGTGATTGGATCATGAGGCCTCACAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGTAGACCTAGTCTTCAGTGATTGGATCATGAGGCCTCACAGAAT  450

seq1  CTGTGGCTTAATCCACTCATTAACTGGAAATCTGTTGGAATAATTGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCTTAATCCACTCATTAACTGGAAATCTGTTGGAATAATTGGGAG  500

seq1  ATGGAAAAAATTGGAGGGTGGGCAACTTAAAGGGAGAAGTAGGTCACTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAAAATTGGAGGGTGGGCAACTTAAAGGGAGAAGTAGGTCACTGG  550

seq1  GGGGCCGTTTCTTGTCCTGGGGGCTCCTTCATGTTTCTCTCTCTCTCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCGTTTCTTGTCCTGGGGGCTCCTTCATGTTTCTCTCTCTCTCTTA  600

seq1  CCTGCTATCACACATAATTCCAGAAATGCAGACCCTAGTGACTATGGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTATCACACATAATTCCAGAAATGCAGACCCTAGTGACTATGGACT  650

seq1  GGAATTGCTGAAACAGTGAGGTTTCCTTCATTAAAATTTTCTTTCATGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGCTGAAACAGTGAGGTTTCCTTCATTAAAATTTTCTTTCATGTA  700

seq1  TTTGCCACAGTAACATAAACATAGACTGAACACAAAAAAATTACTTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCACAGTAACATAAACATAGACTGAACACAAAAAAATTACTTCTGT  750

seq1  AGCATTTCCTCTGAATCCACAGTTTCTAGGCCCCTGGTAAACACTGAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTCCTCTGAATCCACAGTTTCTAGGCCCCTGGTAAACACTGAAGA  800

seq1  TGACAAGTCACATATGTCAAATGATAAAATGCTTACATGTAACTTACAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGTCACATATGTCAAATGATAAAATGCTTACATGTAACTTACAGA  850

seq1  ATCCATCCCTACAGTTTAAACATCAATACATTACTAGTAACAACGAATAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCCCTACAGTTTAAACATCAATACATTACTAGTAACAACGAATAC  900

seq1  AATATAAATGCCATGTGGGTAGATGTCATAGTATGTTGTGTAGCGGCAAT  950
       |||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  -ATATAAATGCCATGTGGGTAGATGTCATAGTATGTTGTGTAGCGGC-AT  948

seq1  GCAAAAGAATCATTTACAACTTCAGTACACAGTGTATTTTCCCAAATATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGAATCATTTACAACTTCAGTACACAGTGTATTTTCCCAAATATC  998

seq1  TTCTTTTGTATTTTAAGTCAAGCAATATGAGTTCAATGAA-TATAAAGGG  1049
      ||||||||||||||||||| ||| |||||||||||||||| |||||||| 
seq2  TTCTTTTGTATTTTAAGTC-AGC-ATATGAGTTCAATGAATTATAAAGGA  1046

seq1  ATAGC-TGTTCTTAAAGCAATGTAACTAACCACACATTAAATATTTATGT  1098
      ||||| |||||||||||| ||||| ||||||   ||||||||| ||||||
seq2  ATAGCTTGTTCTTAAAGC-ATGTACCTAACCCACCATTAAATA-TTATGT  1094

seq1  TACAAAAGTATATGTTAAATATCATAATGTTAAATAATGGAATAAACAAA  1148
      ||| ||||||| || |||||||||| | |||| ||    | |||   | |
seq2  TACTAAAGTATTTG-TAAATATCAT-ACGTTATAT----GGATA---ACA  1135

seq1  CTTAATTTATATAATATTATAAATGGAATTCTATACCAATTATTT  1193
      | |||||||||||||| |||||  || | ||||| |||| |||||
seq2  CCTAATTTATATAATA-TATAA--GGGAATCTAT-CCAA-TATTT  1175


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