BAC Information

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BAC

Clone NameB6Ng01-094D07
Chromosome10 (Build37)
Map Location 106,376,817 - 106,377,897
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667758, EG639162, Ppfia2, Olfr1556-ps1
Downstream gene8430416H19Rik, Lin7a, Myf5, Myf6, Ptprq, EG628870
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094D07.bB6Ng01-094D07.g
ACCDH905487DH905488
length1,2121,062
definitionDH905487|Mus musculus domesticus DNA, BAC clone: B6Ng01-094D07, 5' end.DH905488|Mus musculus domesticus DNA, BAC clone: B6Ng01-094D07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaacttttctttatttccagccctcccctccagttttattttt
ctttattgactgtttctgcttgaaaatcttaaacggttttcttcatttca
ttctggtgtttttctgtgtgtttcctaggtttctttaaggggtttactca
tttcctctttaagggcctctgtagtattcaaaaggctcttatgaagtcat
tgtccagtgcttcatctacattgtatttcccagggcctaccatggtaaga
attttgagctttagtggaaccatttcgtccgagccatcatattctcatgc
tgccttctagaatctggatttatatttgttgaaaactagctggtgctatc
tggacttgttcttgttagattggtaacccacccctggcttgctgctgctc
tctctggttcctagggtactgtgttggctgtgtattgactggtagagaat
gtttctgaggccctggtaggtgtgaccatgggcggggcctcagagggatg
gttagactgattcttgctattggaagcttccactcagggatggagattgg
ttagaagagggtgtctggaaggagggaaggaatcaggatatgacaccagg
atctgcttaatctcctgggatagagaacagagagagcaaggaggccacag
tttatagtctgctacagagatggggttgagtgtcagagactgggttctga
tgagacaagggttaatgaacatctgaagagcacctacctgactcattggc
cagtgtggcctgtgaaagtggtttattttggggcaggtgattgttcatca
tgaagactcaaggcaggaacttaccagcaagagctgcggcagagacatgg
aaaattctgtttattagcttgtttatcttgcttgctgtcttagttagggt
tcatggcttgaggagacaccacaaccaagcagttgtagagataaaaacat
taattgggggtagattacaatttcgaggttagaccattatcatcatgtga
aagctggctgtagcaggcagtagtgcctgaagagctagattctactactt
gatccaaagcagcctagagagggaaactaatttctgtagacaacagagaa
ggtctctttccttcctgggaaaagtctagcatataattcagtgcctcccc
aagggtacatcttacaaggccaccctcttatgtgtcacctccctagccaa
ggcatcattgag
gaattcattctctgtctggagacattccaaactgcttcacaatttttttt
ttttagaatcttacttttaaaatccatatattgaaaatatagacataact
tagtgcctgattttcttaggtagttactatagttgcttgccagtcttgac
aacagaatatttacccagagcaacttacatacaggtaggctagatagtgt
ctatttgattggatgaatgaagaatggccattttacttggttatctagag
ttaatggtcatcaacaatgtgttcaatagtgctccaaacatctgaaactt
aatttgtaagatgctatgatctattcaaaggtcattattgaatacttctt
tcaggtatttggttgtgtaactagtaagacaatacaggtaaccaaatata
aatactaaaacttctccagtgtactttttaccaattatcatccagttgct
tcgcttttctatctttaatggggatacatgttgatctggttaggaaactg
ctgattatttttaaaagccaaagataatttgtggataagtcatacagtcc
cctggaatataatatcacaatgtttcatttttccggaatgtcgtgtcagc
tctaaataaagtacattataatactggataaaatatgatgtcattcaacc
attcagtagaaacaagaaaggaagaggggaggctttcttagttgttctac
taatgacatttgcatcgtaaatggcagttttaaatggacaatttaagaga
aaagcatcaaaaatgcatgttgacaacatctgagatcaagaaatcaatca
aaaccccacaaggaggacagtgaaagcttttcctccatgtgaagccaatg
aagcactgataatggacttgcattaaggagctaagacaagaatgctactt
aaacacaactaactttcttggtaatagctgtcattgttgttccaatatgg
ccacttttatataggccactttattgattatagatccgtaagttctgaga
aacatatcagttttgagggcacattttaagatttacatacagcacataga
agactcatatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_106376817_106377897
seq2: B6Ng01-094D07.g_69_1130

seq1  GAATTCATTCTCTGTCTGGAGACATTCCAAACTGCTTCACAATTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTCTGTCTGGAGACATTCCAAACTGCTTCACAATTTTTTTT  50

seq1  TTTTAGAATCTTACTTTTAAAATCCATATATTGAAAATATAGACATAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAATCTTACTTTTAAAATCCATATATTGAAAATATAGACATAACT  100

seq1  TAGTGCCTGATTTTCTTAGGTAGTTACTATAGTTGCTTGCCAGTCTTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCCTGATTTTCTTAGGTAGTTACTATAGTTGCTTGCCAGTCTTGAC  150

seq1  AACAGAATATTTACCCAGAGCAACTTACATACAGGTAGGCTAGATAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATATTTACCCAGAGCAACTTACATACAGGTAGGCTAGATAGTGT  200

seq1  CTATTTGATTGGATGAATGAAGAATGGCCATTTTACTTGGTTATCTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGATTGGATGAATGAAGAATGGCCATTTTACTTGGTTATCTAGAG  250

seq1  TTAATGGTCATCAACAATGTGTTCAATAGTGCTCCAAACATCTGAAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGTCATCAACAATGTGTTCAATAGTGCTCCAAACATCTGAAACTT  300

seq1  AATTTGTAAGATGCTATGATCTATTCAAAGGTCATTATTGAATACTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTAAGATGCTATGATCTATTCAAAGGTCATTATTGAATACTTCTT  350

seq1  TCAGGTATTTGGTTGTGTAACTAGTAAGACAATACAGGTAACCAAATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTATTTGGTTGTGTAACTAGTAAGACAATACAGGTAACCAAATATA  400

seq1  AATACTAAAACTTCTCCAGTGTACTTTTTACCAATTATCATCCAGTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAAAACTTCTCCAGTGTACTTTTTACCAATTATCATCCAGTTGCT  450

seq1  TCGCTTTTCTATCTTTAATGGGGATACATGTTGATCTGGTTAGGAAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTTTTCTATCTTTAATGGGGATACATGTTGATCTGGTTAGGAAACTG  500

seq1  CTGATTATTTTTAAAAGCCAAAGATAATTTGTGGATAAGTCATACAGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTATTTTTAAAAGCCAAAGATAATTTGTGGATAAGTCATACAGTCC  550

seq1  CCTGGAATATAATATCACAATGTTTCATTTTTCCGGAATGTCGTGTCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAATATAATATCACAATGTTTCATTTTTCCGGAATGTCGTGTCAGC  600

seq1  TCTAAATAAAGTACATTATAATACTGGATAAAATATGATGTCATTCAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATAAAGTACATTATAATACTGGATAAAATATGATGTCATTCAACC  650

seq1  ATTCAGTAGAAACAAGAAAGGAAGAGGGGAGGCTTTCTTAGTTGTTCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTAGAAACAAGAAAGGAAGAGGGGAGGCTTTCTTAGTTGTTCTAC  700

seq1  TAATGACATTTGCATCGTAAATGGCAGTTTTAAATGGACAATTTAAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACATTTGCATCGTAAATGGCAGTTTTAAATGGACAATTTAAGAGA  750

seq1  AAAGCATCAAAAATGCATGTTGACAACATCTGAGATCAAGAAATCAATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATCAAAAATGCATGTTGACAACATCTGAGATCAAGAAATCAATCA  800

seq1  AAACCCCACAAGGAGGACAGTGAAAGCTTTTCCTCCATGTGAAGCCAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCACAAGGAGGACAGTGAAAGCTTTTCCTCCATGTGAAGCCAATG  850

seq1  AAGCACTGATAATGGACTTGCATTAAGGAGCTAAGACAAGAATGCTACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTGATAATGGACTTGCATTAAGGAGCTAAGACAAGAATGCTACTT  900

seq1  AAAACACAACTAACTTTCTTGGTAAATAGCTGTCATTGTTGTTCCAAATA  950
       |||||||||||||||||||||| ||||||||||||||||||||| ||||
seq2  -AAACACAACTAACTTTCTTGGT-AATAGCTGTCATTGTTGTTCC-AATA  947

seq1  TGGCCACTTTTATATAGGCCACTTTATTGAATTTATAAGATCCGTAAGTT  1000
      ||||||||||||||||||||||||||||||  |||| |||||||||||||
seq2  TGGCCACTTTTATATAGGCCACTTTATTGA--TTAT-AGATCCGTAAGTT  994

seq1  CTGAAGGAAACATAATCAAGTTTTTGAGGGCACATTTTAAAGAATTTTAC  1050
      ||||  ||||||| ||||   ||||||||||||||||| ||||  |||||
seq2  CTGA--GAAACAT-ATCA--GTTTTGAGGGCACATTTT-AAGA--TTTAC  1036

seq1  ATACAAGCAACATTAGACAGACTCATTATGT  1081
      |||| ||| ||| |||| ||||||| |||||
seq2  ATAC-AGC-ACA-TAGA-AGACTCA-TATGT  1062