BAC Information

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BAC

Clone NameB6Ng01-096N05
Chromosome10 (Build37)
Map Location 68,013,639 - 68,239,154
singlet/doubletdoublet
Overlap geneEG665342, Tmem26
Upstream geneLOC100040081, LOC100039618, Zfp365, Plekhk1, Arid5b, LOC100040136, 1700040L02Rik
Downstream geneA930033H14Rik, Rhobtb1, LOC100040182, Cdc2a, LOC100039696, EG382371, Ank3, LOC100039734
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096N05.bB6Ng01-096N05.g
ACCDH907365DH907366
length1,2161,188
definitionDH907365|Mus musculus domesticus DNA, BAC clone: B6Ng01-096N05, 5' end.DH907366|Mus musculus domesticus DNA, BAC clone: B6Ng01-096N05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,013,639 - 68,015,172)(68,237,963 - 68,239,154)
sequence
gaattcaggcatgctgcagttttcagtcaggtagggtagacctagaaaaa
gaatatcagtcaaataaagcttatcatctttgttatcataaccagcattc
tggctaactgcttttctgtgcgctatcttccctaaacctcacaacagatg
tgatcactggggcttaaaggagttaattatttacccagcattacagagct
atttagcggaggtgatggaatttaaactcaagactatcaaattaagagcc
catgttacaatacactgtattgtgtctcagagcaatagtctgcaagcagt
attcagatgttctactaatatttaactcgatattcgctttttaaagcacc
tattgttagtcatgttttcgatttgtaattaaaagcatgtactgaaatat
actattatccacacatgatcatactggagggcctccatctgttaaattga
gtgttagggatgttttgcttgtatgtaattttttaaaaatccaatctccg
tgcctttgaaaaaacgtataaatgtttcaatttttttatgattaaacaga
gtcatcagatgagggagatggtacagtggataaggggttcgccatgccag
tgagagacataaatccagatacctagcactgacgaatacagccaagggct
ctggtgaatattgtacttcccatgatgcaatggcagagacaggagggtcc
ctacgagttgagccaaatccgtgaatgagctccaggttcattgagaacgt
ttgtccaaaaactttaagctggagaatgactgaggaagccctttgctatc
agcctccaatgaccagttatgtgtgcacataataatagtatctaaattag
cagtgcagacagcgctagggtgactttaatatgacaccatacacacgtgt
catatgttttctttctaatgagctctcagtgagtccatgtggcttgaact
tgttacgggggatgcacacctgattcaatcctctacctttgatctgctcg
gtatttttttttaataaagcctgacttatgcaagtgagcatgtgtgcctg
catgtgtgcatgtgtactgtggatgcacatgtgtcctgttgccaatgtgt
agaaatattatcatccctaaactggggacaagacagaagtccacttttct
atatctattcaaaaggtactaagctactagacgaagatctctgagtgatc
aggatcactgaagaaa
gaattcctgcagcacatgtctaacatgcgaaagagttatggcatgattcc
aagctgacaccgaccaatgcaatgttccatggtcatagaacagttttgaa
tctttgctgtccaccatgggagccacatggggcaaaggaccaggcaaagc
agggccagcatgacagaagagtttggttgttcctttgcttgatgtcatac
aaatccattcagttgtgtatgactggtgggtacatacagaatacagaaat
acagaaacactaaaatagtgtaggaaatcactaaaatgaagacaagccga
acagtttgcctcttgccaacccttgaagatttatgtattctttaaagtta
gaataagagctgccattaaaggaaatcttaattttccgtaccacggcttg
aaatcctttgttccttttacaatacatgtggatctcaagatgtgattggc
tgaaaatatggagactacacattgccaaatcacttagcacttattgcatt
attgagtcgtcacttgaactgctgggtcatcccatttcacagatggaaaa
cttgaggcacatatatctcacctaattttggcaggattagagatgctaag
taatagaaggattaactgagttgaatataaagcagtgtagttaactgttc
aagtatttattattattaattttgggggtctttctgcaaatgaaatttta
catagacaaggctgacttataactttctatgttgccaaggatgagtgtga
agccctgctcctcctgttttcaccatcagagtgtcgggattaaaggatgc
acttcaccatacctggctacactcacgtatcttaagtccaacacacaccg
aagtgagtccacacttggttttcctgagtgtcactttcttcctaagttgg
agtagagctaacgctaggatattaaacatgacctcactcaacttacgccc
ttgtgctagtatgatttatctttaggagtcataattttctatttatttat
acaaatacaaaaaaacatttacctgcagatcaaaggggaactgcagcata
cttccacgtcccccccacaagaatgccaagaacagagataggtggttcta
gaaagataagagcaggtaatggagcagttacttacaccctaccttcgaag
aaggagagtgataactcagctggtatagggactaaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_68013639_68015172
seq2: B6Ng01-096N05.b_45_1260

seq1  GAATTCAGGCATGCTGCAGTTTTCAGTCAGGTAGGGTAGACCTAGAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCATGCTGCAGTTTTCAGTCAGGTAGGGTAGACCTAGAAAAA  50

seq1  GAATATCAGTCAAATAAAGCTTATCATCTTTGTTATCATAACCAGCATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCAGTCAAATAAAGCTTATCATCTTTGTTATCATAACCAGCATTC  100

seq1  TGGCTAACTGCTTTTCTGTGCGCTATCTTCCCTAAACCTCACAACAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAACTGCTTTTCTGTGCGCTATCTTCCCTAAACCTCACAACAGATG  150

seq1  TGATCACTGGGGCTTAAAGGAGTTAATTATTTACCCAGCATTACAGAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACTGGGGCTTAAAGGAGTTAATTATTTACCCAGCATTACAGAGCT  200

seq1  ATTTAGCGGAGGTGATGGAATTTAAACTCAAGACTATCAAATTAAGAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCGGAGGTGATGGAATTTAAACTCAAGACTATCAAATTAAGAGCC  250

seq1  CATGTTACAATACACTGTATTGTGTCTCAGAGCAATAGTCTGCAAGCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTACAATACACTGTATTGTGTCTCAGAGCAATAGTCTGCAAGCAGT  300

seq1  ATTCAGATGTTCTACTAATATTTAACTCGATATTCGCTTTTTAAAGCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGATGTTCTACTAATATTTAACTCGATATTCGCTTTTTAAAGCACC  350

seq1  TATTGTTAGTCATGTTTTCGATTTGTAATTAAAAGCATGTACTGAAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTAGTCATGTTTTCGATTTGTAATTAAAAGCATGTACTGAAATAT  400

seq1  ACTATTATCCACACATGATCATACTGGAGGGCCTCCATCTGTTAAATTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTATCCACACATGATCATACTGGAGGGCCTCCATCTGTTAAATTGA  450

seq1  GTGTTAGGGATGTTTTGCTTGTATGTAATTTTTTAAAAATCCAATCTCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAGGGATGTTTTGCTTGTATGTAATTTTTTAAAAATCCAATCTCCG  500

seq1  TGCCTTTGAAAAAACGTATAAATGTTTCAATTTTTTTATGATTAAACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTGAAAAAACGTATAAATGTTTCAATTTTTTTATGATTAAACAGA  550

seq1  GTCATCAGATGAGGGAGATGGTACAGTGGATAAGGGGTTCGCCATGCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCAGATGAGGGAGATGGTACAGTGGATAAGGGGTTCGCCATGCCAG  600

seq1  TGAGAGACATAAATCCAGATACCTAGCACTGACGAATACAGCCAAGGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGACATAAATCCAGATACCTAGCACTGACGAATACAGCCAAGGGCT  650

seq1  CTGGTGAATATTGTACTTCCCATGATGCAATGGCAGAGACAGGAGGGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGAATATTGTACTTCCCATGATGCAATGGCAGAGACAGGAGGGTCC  700

seq1  CTACGAGTTGAGCCAAATCCGTGAATGAGCTCCAGGTTCATTGAGAACGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGAGTTGAGCCAAATCCGTGAATGAGCTCCAGGTTCATTGAGAACGT  750

seq1  TTGTCCAAAAACTTTAAGCTGGAGAATGACTGAGGAAGCCCTTTGCTATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCAAAAACTTTAAGCTGGAGAATGACTGAGGAAGCCCTTTGCTATC  800

seq1  AGCCTCCAATGACCAGTTATGTGTGCACATAATAATAGTATCTAAATTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCAATGACCAGTTATGTGTGCACATAATAATAGTATCTAAATTAG  850

seq1  CAGTGCAGACAGCGCTAGGGTGACTTTAATATGACACCATACACACGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCAGACAGCGCTAGGGTGACTTTAATATGACACCATACACACGTGT  900

seq1  CATATGTTTTCTTTCTAATGAGCTCTCAGTGAGTCCATGTGGCTTGAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTTTTCTTTCTAATGAGCTCTCAGTGAGTCCATGTGGCTTGAACT  950

seq1  TGTTACGGGGGATGCACACCTGATTCAATCCCTCTACCTTTGATCTGCTC  1000
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGTTACGGGGGATGCACACCTGATTCAAT-CCTCTACCTTTGATCTGCTC  999

seq1  GGATATTTTTTTTTTAATTAAGGCCTGACTTAGTGCAAGTGAGCATGTGT  1050
      || |||||||||||  | ||| |||||||||| |||||||||||||||||
seq2  GG-TATTTTTTTTT--AATAAAGCCTGACTTA-TGCAAGTGAGCATGTGT  1045

seq1  GCCTGCATGTGTGCATGTGTACGTGTGGATGCACATGTGTCCTGTTGCAC  1100
      |||||||||||||||||||||| |||||||||||||||||||||||||  
seq2  GCCTGCATGTGTGCATGTGTAC-TGTGGATGCACATGTGTCCTGTTGCCA  1094

seq1  ATGTGTAGATATATATATCAATCCCCCTAAACTGGGGAACAAGACAAGGA  1150
      ||||||||| |||| |||||    ||||||||||||| ||||||||  ||
seq2  ATGTGTAGAAATAT-TATCA---TCCCTAAACTGGGG-ACAAGACA--GA  1137

seq1  TGTCCACTTTTTCCATATCTATTCAAAAGAGTACTTAAAATCTTAACTAG  1200
       |||||| ||||| ||||||||||||||| |||||   || ||  |||||
seq2  AGTCCAC-TTTTCTATATCTATTCAAAAG-GTACT---AAGCT--ACTAG  1180

seq1  AGCAGAAAGATCTCTGAAGTAGATCAAGGGAATAC--AACTTGAAAAGGA  1248
         |  |||||||||| ||| |||||  |||  ||  ||   ||||    
seq2  ---ACGAAGATCTCTG-AGT-GATCA--GGATCACTGAA---GAAA----  1216

seq1  AGAACTTAAAGTATCATAATTTGCAGAGGCTATGATAATATACATAAGTG  1298
                                                        
seq2  --------------------------------------------------  1216

seq1  ACCCAGAATACTCCATTGGGAAACTCTTACAGCTGATAAACACTTTCAGC  1348
                                                        
seq2  --------------------------------------------------  1216

seq1  AAAGTGTCTTGAGTATAGACATTAACTCATACAGATCACTAGGTCTCCTA  1398
                                                        
seq2  --------------------------------------------------  1216

seq1  TACACAAATGATATATGGTCCGAGAAAGAAATCAAGGAAACACCTTTCAC  1448
                                                        
seq2  --------------------------------------------------  1216

seq1  CATACACTCAAATAATATAAAATATCTTGGAGTGGCCAAGCAAGGGAAAG  1498
                                                        
seq2  --------------------------------------------------  1216

seq1  ACTTGTGTGCTTAAAAACTTTAAGGCACTGAAGAAA  1534
                                          
seq2  ------------------------------------  1216

seq1: chr10_68237963_68239154
seq2: B6Ng01-096N05.g_70_1257 (reverse)

seq1  TATTTAGTCCCTA-ACAAGCTGTGATTTATCATCTCT-CTTCTCTGAGTG  48
      ||||||||||||| || |||  ||| |||||| |||| |||||  ||  |
seq2  TATTTAGTCCCTATACCAGC--TGAGTTATCA-CTCTCCTTCTTCGAAGG  47

seq1  T-GGGTGTATGGTAAACTGCTCATTTAACGTGCTCTTATC-TTCTAGAAC  96
      | ||||||| |   ||||||||  || || |||||||||| |||||||||
seq2  TAGGGTGTAAG--TAACTGCTCCATT-ACCTGCTCTTATCTTTCTAGAAC  94

seq1  CAACCCTA-CTCTGGTCTCTGGCATTCTTGTGGTGTGGACGTGG-AGTAT  144
      ||  |||| ||||| ||| |||||||||||||| | |||||||| |||||
seq2  CA--CCTATCTCTGTTCT-TGGCATTCTTGTGGGGGGGACGTGGAAGTAT  141

seq1  GCTGCAGTTCCCCCTTGATCTGGCAGGTAAATGTTTTTTTGTATTTGTAT  194
      ||||||||||||| ||||||| ||||||||||||||||||||||||||||
seq2  GCTGCAGTTCCCCTTTGATCT-GCAGGTAAATGTTTTTTTGTATTTGTAT  190

seq1  AAATAAATAGAAAATTATGACTCCTAAAGATAAATCATACTAGCACAAGG  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAGAAAATTATGACTCCTAAAGATAAATCATACTAGCACAAGG  240

seq1  GCGTAAGTTGAGTGAGGTCATGTTTAATATCCTAGCGTTAGCTCTACTCC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTAAGTTGAGTGAGGTCATGTTTAATATCCTAGCGTTAGCTCTACTCC  290

seq1  AACTTAGGAAGAAAGTTGACACTCAGGAAAACCAAGTGTGGACTCACTTC  344
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AACTTAGGAAGAAAG-TGACACTCAGGAAAACCAAGTGTGGACTCACTTC  339

seq1  GGTGTGTGTTGGACTTAAGATACGTGAGTGTAGCCAGGTATGGTGAAGTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTGTTGGACTTAAGATACGTGAGTGTAGCCAGGTATGGTGAAGTG  389

seq1  CATCC-TTAATCCCGACACTCTGATGGTGAAAACAGGAGGAGCAGGGCTT  443
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTAATCCCGACACTCTGATGGTGAAAACAGGAGGAGCAGGGCTT  439

seq1  CACACTCATCCTTGGCAACATAGAAAGTTATAAGTCAGCCTTGTCTATGT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCATCCTTGGCAACATAGAAAGTTATAAGTCAGCCTTGTCTATGT  489

seq1  AAAATTTCATTTGCAGAAAGACCCCCAAAATTAATAATAATAAATACTTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTCATTTGCAGAAAGACCCCCAAAATTAATAATAATAAATACTTG  539

seq1  AACAGTTAACTACACTGCTTTATATTCAACTCAGTTAATCCTTCTATTAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTAACTACACTGCTTTATATTCAACTCAGTTAATCCTTCTATTAC  589

seq1  TTAGCATCTCTAATCCTGCCAAAATTAGGTGAGATATATGTGCCTCAAGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATCTCTAATCCTGCCAAAATTAGGTGAGATATATGTGCCTCAAGT  639

seq1  TTTCCATCTGTGAAATGGGATGACCCAGCAGTTCAAGTGACGACTCAATA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATCTGTGAAATGGGATGACCCAGCAGTTCAAGTGACGACTCAATA  689

seq1  ATGCAATAAGTGCTAAGTGATTTGGCAATGTGTAGTCTCCATATTTTCAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATAAGTGCTAAGTGATTTGGCAATGTGTAGTCTCCATATTTTCAG  739

seq1  CCAATCACATCTTGAGATCCACATGTATTGTAAAAGGAACAAAGGATTTC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCACATCTTGAGATCCACATGTATTGTAAAAGGAACAAAGGATTTC  789

seq1  AAGCCGTGGTACGGAAAATTAAGATTTCCTTTAATGGCAGCTCTTATTCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCGTGGTACGGAAAATTAAGATTTCCTTTAATGGCAGCTCTTATTCT  839

seq1  AACTTTAAAGAATACATAAATCTTCAAGGGTTGGCAAGAGGCAAACTGTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTAAAGAATACATAAATCTTCAAGGGTTGGCAAGAGGCAAACTGTT  889

seq1  CGGCTTGTCTTCATTTTAGTGATTTCCTACACTATTTTAGTGTTTCTGTA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTGTCTTCATTTTAGTGATTTCCTACACTATTTTAGTGTTTCTGTA  939

seq1  TTTCTGTATTCTGTATGTACCCACCAGTCATACACAACTGAATGGATTTG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTATTCTGTATGTACCCACCAGTCATACACAACTGAATGGATTTG  989

seq1  TATGACATCAAGCAAAGGAACAACCAAACTCTTCTGTCATGCTGGCCCTG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACATCAAGCAAAGGAACAACCAAACTCTTCTGTCATGCTGGCCCTG  1039

seq1  CTTTGCCTGGTCCTTTGCCCCATGTGGCTCCCATGGTGGACAGCAAAGAT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCTGGTCCTTTGCCCCATGTGGCTCCCATGGTGGACAGCAAAGAT  1089

seq1  TCAAAACTGTTCTATGACCATGGAACATTGCATTGGTCGGTGTCAGCTTG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACTGTTCTATGACCATGGAACATTGCATTGGTCGGTGTCAGCTTG  1139

seq1  GAATCATGCCATAACTCTTTCGCATGTTAGACATGTGCTGCAGGAATTC  1192
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATGCCATAACTCTTTCGCATGTTAGACATGTGCTGCAGGAATTC  1188