BAC Information

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BAC

Clone NameB6Ng01-101M10
Chromosome10 (Build37)
Map Location 10,826,700 - 10,949,738
singlet/doubletdoublet
Overlap geneShprh
Upstream geneLOC100039238, LOC665110, 9130014G24Rik, Rab32, EG382450, Grm1
Downstream geneFbxo30, Epm2a, EG666732, LOC100039343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101M10.bB6Ng01-101M10.g
ACCDH910855DH910856
length1,020950
definitionDH910855|Mus musculus domesticus DNA, BAC clone: B6Ng01-101M10, 5' end.DH910856|Mus musculus domesticus DNA, BAC clone: B6Ng01-101M10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,826,700 - 10,827,719)(10,948,908 - 10,949,738)
sequence
gaattctgtctttttagggagaaatgaaatacatgtttgttgatgtaagt
tcaagctgctttgtttcccatgggtatttggagacatatttctcaatgct
attattctcgggctaagtttgatgatatttcaaaaaaatgtaattggaat
tttctttctgttgcctctaaggaaccatttggttgtatatcacagactaa
atgagcccatttaaaagaaaagctccagtattccatttattgttattctc
aaagtggttgctaaatgatattttcctttttgtatgttcaatacagaaat
gacatatattcaaattcctttttttgtctgctcagtacacaaatgacata
tattcagtttttcctgtttcttaactggcatcttaagcaaccaaacacaa
taaactgtaactgtaatgctgcagacatgagtggaattgtcagtcagaca
ctgttcatttacattcatcttttatcacatctctgacaacattcttgcca
ttttctggagaattgactagcaagttcttgattctgggactgttccttac
acagcagctggatgcctgggcctttgttcagccttgttggcacatttttc
ccaatcccttcgattctcacatcattctggatggtgtcagttacgttaga
caccatcctgcctctagctacatccatatttcttacattttcctaaaact
cgtatgtttttaaaccctacattgctatgccaatataaatggtagttgat
acaattatttttattattgttgttaattcaataataaaaactgagtgtga
atatatgctaggcacttttctaagattgggtttaagagtgaacaaattac
atgaaaggttctggtttcttctcttaggagaaacagaaaataatgctaag
tagaataataaagtatatatatgtaattgtaccattgagacagcagcctg
caagtatgggaatgaaagaagactacactaagagagagagctttttgaat
cactgggctctgtgagatgg
gaattcagtttgtccctctgggggctggaatgtttcagttagtaaaaatg
cttctcgccacacatacatgaagagctaaggtcaggtcttcagcactcaa
gaaaaaaaaaaagctacacatcagagatccagttctggggagacagagat
aggaggatgagtcagctagacatcgaactcttggaagtctgatgcaaatg
agatctcaagaaaaaggcagcggtacagacatttacattttctttcatct
tggttaacttctggccttttcagagtcagaatctgactgatgagttcttt
cagaggaaaagtggtttaaatagacagggggaaatgagactatctttgta
ggagcagcagttttagaaaaagttcctggagtcaggaaataatgtaccaa
tgggaaaggttaagtgagaccatatacctgcttttcagagaagtgttagt
ttaatcagatgtggagggtcccttcaggttttacagcagggagagaaatg
atccacaaaaagacaagaataaaactcagttacatttttaggtacaggtg
ttaggccaggacttttaaagtctgacatcagctcatattatatttttgcc
atatttaagtattttcacaattttagaaaaacgttttttggtaacaactc
agcctcattaaagctcaagacatgtttccactaaagctgttttataaagt
aaatatggtgtctgtatttttgttgttgacttacagacaatacttgagat
aagggtctagggaaaatgactgaggtaaatacaatccctgtgggagtgag
gatttgtcctggtcctaagataacctaacactgactgttgcaaagtacaa
atgactcttctcacaaggattagtttagtggcaacaagtatgttcaataa
aaggtttaagaattaaagggtatggacaagcaaagcttaaacctctggaa

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_10826700_10827719
seq2: B6Ng01-101M10.b_43_1051

seq1  GAATTCTGTCTTTTTAGGGAGAAATGAAATACATGTTTGTTGATGTAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCTTTTTAGGGAGAAATGAAATACATGTTTGTTGATGTAAGT  50

seq1  TCAAGCTGCTTTGTTTCCCATGGGTATTTGGAGACATATTTCTCAATGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCTGCTTTGTTTCCCATGGGTATTTGGAGACATATTTCTCAATGCT  100

seq1  ATTATTCTCGGGCTAAGTTTGATGATATTTCAAAAAAATGTAATTGGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTCGGGCTAAGTTTGATGATATTTCAAAAAAATGTAATTGGAAT  150

seq1  TTTCTTTCTGTTGCCTCTAAGGAACCATTTGGTTGTATATCACAGACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTGTTGCCTCTAAGGAACCATTTGGTTGTATATCACAGACTAA  200

seq1  ATGAGCCCATTTAAAAGAAAAGCTCCAGTATTCCATTTATTGTTATTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCCATTTAAAAGAAAAGCTCCAGTATTCCATTTATTGTTATTCTC  250

seq1  AAAGTGGTTGCTAAATGATATTTTCCTTTTTGTATGTTCAATACAGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGTTGCTAAATGATATTTTCCTTTTTGTATGTTCAATACAGAAAT  300

seq1  GACATATATTCAAATTCCTTTTTTTGTCTGCTCAGTACACAAATGACATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATATTCAAATTCCTTTTTTTGTCTGCTCAGTACACAAATGACATA  350

seq1  TATTCAGTTTTTCCTGTTTCTTAACTGGCATCTTAAGCAACCAAACACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGTTTTTCCTGTTTCTTAACTGGCATCTTAAGCAACCAAACACAA  400

seq1  TAAACTGTAACTGTAATGCTGCAGACATGAGTGGAATTGTCAGTCAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGTAACTGTAATGCTGCAGACATGAGTGGAATTGTCAGTCAGACA  450

seq1  CTGTTCATTTACATTCATCTTTTATCACATCTCTGACAACATTCTTGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCATTTACATTCATCTTTTATCACATCTCTGACAACATTCTTGCCA  500

seq1  TTTTCTGGAGAATTGACTAGCAAGTTCTTGATTCTGGGACTGTTCCTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGGAGAATTGACTAGCAAGTTCTTGATTCTGGGACTGTTCCTTAC  550

seq1  ACAGCAGCTGGATGCCTGGGCCTTTGTTCAGCCTTGTTGGCACATTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGCTGGATGCCTGGGCCTTTGTTCAGCCTTGTTGGCACATTTTTC  600

seq1  CCAATCCCTTCGATTCTCACATCATTCTGGATGGTGTCAGTTACGTTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCCCTTCGATTCTCACATCATTCTGGATGGTGTCAGTTACGTTAGA  650

seq1  CACCATCCTGCCTCTAGCTACATCCATATTTCTTACATTTTCCTAAAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCCTGCCTCTAGCTACATCCATATTTCTTACATTTTCCTAAAACT  700

seq1  CGTATGTTTTTAAACCCTACATTGCTATGCCAATATAAATGGTAGTTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATGTTTTTAAACCCTACATTGCTATGCCAATATAAATGGTAGTTGAT  750

seq1  ACAATTATTTTTATTATTGTTGTTAATTCAATAATAAAAACTGAGTGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTATTTTTATTATTGTTGTTAATTCAATAATAAAAACTGAGTGTGA  800

seq1  ATATATGCTAGGCACTTTTCTAAGATTGGGTTTCAAGAGTGAACAAATTA  850
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATATATGCTAGGCACTTTTCTAAGATTGGGTTT-AAGAGTGAACAAATTA  849

seq1  CATGAAAGGTTCTGGTTTCTTTCTCTTAGGAAGAAACAGAAAATAAATGC  900
      ||||||||||||||||||| |||||||||| ||||||||||||| |||||
seq2  CATGAAAGGTTCTGGTTTC-TTCTCTTAGG-AGAAACAGAAAAT-AATGC  896

seq1  TAAGTAGAATAATAAAGTATATTATATGTAATTGTACCATTGAGACAAGC  950
      ||||||||||||||||||||| |||||||||||||||||||||||| |||
seq2  TAAGTAGAATAATAAAGTATA-TATATGTAATTGTACCATTGAGAC-AGC  944

seq1  AGCCCTGCAGGTATGGGAATGAAAGAAGACAACAACTAAAGAGAGAGAAG  1000
      || |||||| |||||||||||||||||||| || ||| ||||||||| ||
seq2  AG-CCTGCAAGTATGGGAATGAAAGAAGACTAC-ACT-AAGAGAGAG-AG  990

seq1  CTTTTTGAAATCACTGGGCT  1020
      ||||||| ||||||||||||
seq2  CTTTTTG-AATCACTGGGCT  1009

seq1: chr10_10948908_10949738
seq2: B6Ng01-101M10.g_69_901 (reverse)

seq1  CAGTGTTAGGTTATCTTAGGACCAGGACAAATCCTCACTCCCACAGGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTAGGTTATCTTAGGACCAGGACAAATCCTCACTCCCACAGGGAT  50

seq1  TGTATTTACCTCAGTCATTTTCCCTAGACCCTTATCTCAAGTATTGTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTACCTCAGTCATTTTCCCTAGACCCTTATCTCAAGTATTGTCTG  100

seq1  TAAGTCAACAACAAAAATACAGACACCATATTTACTTTAT-AAACAGCTT  149
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAAGTCAACAACAAAAATACAGACACCATATTTACTTTATAAAACAGCTT  150

seq1  TAGTGGAAACATGTCTTGAGCTTTAATGAGGCTGAGTTGTTACCAAAAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGAAACATGTCTTGAGCTTTAATGAGGCTGAGTTGTTACCAAAAAA  200

seq1  CGTTTTTCTAAAATTGTG-AAATACTTAAATATGGCAAAAATATAATATG  248
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CGTTTTTCTAAAATTGTGAAAATACTTAAATATGGCAAAAATATAATATG  250

seq1  AGCTGATGTCAGACTTTAAAAGTCCTGGCCTAACACCTGTACCTAAAAAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATGTCAGACTTTAAAAGTCCTGGCCTAACACCTGTACCTAAAAAT  300

seq1  GTAACTGAGTTTTATTCTTGTCTTTTTGTGGATCATTTCTCTCCCTGCTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTGAGTTTTATTCTTGTCTTTTTGTGGATCATTTCTCTCCCTGCTG  350

seq1  TAAAACCTGAAGGGACCCTCCACATCTGATTAAACTAACACTTCTCTGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCTGAAGGGACCCTCCACATCTGATTAAACTAACACTTCTCTGAA  400

seq1  AAGCAGGTATATGGTCTCACTTAACCTTTCCCATTGGTACATTATTTCCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGTATATGGTCTCACTTAACCTTTCCCATTGGTACATTATTTCCT  450

seq1  GACTCCAGGAACTTTTTCTAAAACTGCTGCTCCTACAAAGATAGTCTCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCAGGAACTTTTTCTAAAACTGCTGCTCCTACAAAGATAGTCTCAT  500

seq1  TTCCCCCTGTCTATTTAAACCACTTTTCCTCTGAAAGAACTCATCAGTCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCTGTCTATTTAAACCACTTTTCCTCTGAAAGAACTCATCAGTCA  550

seq1  GATTCTGACTCTGAAAAGGCCAGAAGTTAACCAAGATGAAAGAAAATGTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGACTCTGAAAAGGCCAGAAGTTAACCAAGATGAAAGAAAATGTA  600

seq1  AATGTCTGTACCGCTGCCTTTTTCTTGAGATCTCATTTGCATCAGACTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTGTACCGCTGCCTTTTTCTTGAGATCTCATTTGCATCAGACTTC  650

seq1  CAAGAGTTCGATGTCTAGCTGACTCATCCTCCTATCTCTGTCTCCCCAGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTTCGATGTCTAGCTGACTCATCCTCCTATCTCTGTCTCCCCAGA  700

seq1  ACTGGATCTCTGATGTGTAGCTTTTTTTTTTTCTTGAGTGCTGAAGACCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATCTCTGATGTGTAGCTTTTTTTTTTTCTTGAGTGCTGAAGACCT  750

seq1  GACCTTAGCTCTTCATGTATGTGTGGCGAGAAGCATTTTTACTAACTGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTAGCTCTTCATGTATGTGTGGCGAGAAGCATTTTTACTAACTGAA  800

seq1  ACATTCCAGCCCCCAGAGGGACAAACTGAATTC  831
      |||||||||||||||||||||||||||||||||
seq2  ACATTCCAGCCCCCAGAGGGACAAACTGAATTC  833