BAC Information

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BAC

Clone NameB6Ng01-104C12
Chromosome10 (Build37)
Map Location 24,296,268 - 24,484,131
singlet/doubletdoublet
Overlap geneCtgf, Enpp1
Upstream geneRps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7, Moxd1, LOC628537
Downstream geneEnpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800, Epb4.1l2, 2010003K15Rik, EG667513
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104C12.bB6Ng01-104C12.g
ACCDH912538DH912539
length1,2051,166
definitionDH912538|Mus musculus domesticus DNA, BAC clone: B6Ng01-104C12, 5' end.DH912539|Mus musculus domesticus DNA, BAC clone: B6Ng01-104C12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,482,918 - 24,484,131)(24,296,268 - 24,297,442)
sequence
gaattcactcaagagtttttttattcagtcaaagtatatttagttccttt
ctatctgccagtcatggtgtaacacaatgaagagttgacagtcctcatgg
acttcacaatatcgatagtggaggcagccatataggaaactaggagctgc
aaagtataacaagtacacgggatagcaggaaggggcaaaggaagacatga
gcactctactgaagtttactgatcgttcttgagcccacagagggaagaga
gagggagaactgaactatactcctccgacttatgcattaaggccctaacc
ctcagttgatggtatttatagacaggcacttcaaaggtaatcagaattag
ataaagttatgagagtggggcctttggtatggcattcgatgactttatac
aaattgataaactcctgacattgagaacacagagatgatgtggtcattgg
caagccatgaagagaagcttcatcagaaattggccatgctggcaccatga
aataggacgttaaacctccagaatttggtgctgataaattcccgctgcct
cagctacccagcttgtgctattttgtggcatcagccaaactaggaaagac
cagaagctaaggctcagggaatccatgcctatgggttggactctcatccc
tttgtgtattcaattacttcagcctgtagtcagttcttttccttcctgct
aatatttataaaccaagtaatcatgatcagaaactgtcaaatatgctaag
gcaggacttgctctcatatgatttacactttagcggaaagttagacagca
aacttgtatgcaaatgaacaagatgaatgggtgcatgttgattgtgagag
tgccaagaacagaaacaggaacaaagtgaggactctagagtctacagaaa
gaacacacagagtaggtctatcagaggaagacagtcagttaatcccagaa
aatgaagagttaggcggccagtcacacatggatctgggagtgttcagacg
agatgggacttgcagtccaggcaacagtgagctctaagcactctggtaac
aaaggcagttatgtcttaagtccatcaaatggtaagacactgcaagttga
tacctacaagtccagaagggctttgattgccttctcaagatgtaaatttg
acttggcctatgaggaaacttctaactatcgtggagagagtgggtgataa
tttct
gaattccatgcaatttcaatttcaatttaaatctataacaagatgtgtgg
tagctgaaaaataagtccccatgtttcaaattaccaagatactgggattt
tttaaaatctgatttctgcctaacttcctaccattggaaaagctcaggga
cttttaatacagcaggagggcgggaaagtgagtgtcagccaatcaaagaa
cggaaaggaaaaaggagaagagaagacaggagaaagcgcaatgagcagag
acctgcccctgagtcaagcagctctgaagtgaaaaccagaacaagaacag
acagggaactaaaccatgacccatcagtgctctagaagtctgcactgttt
ccttcaggaggagaacttgatccaggcagttctctcctccaggatcctgt
tctccattctctcttcaacagttgtcaagtttaagtgaagagcttcagtg
tttaaggaaagcatactaccctgttaaatttaaagttaaaataataagct
ccccatcttccagattgccttgaaaagacaaatgttttgtacctgtgcag
gaactaacagggtctgtgcctgtttgccgacgtatcaagtggtctggaca
gatgtgactcaccaagagcagtaggggctctctttccagagaaccgtggc
cttagaggttgtgtggtataccgtgtacctgtggtgggtaatgctttttt
ttttttttcattctgcttctatatttttttgacccatcttatagatcaaa
acttctatattctgatgaacacaaccacatgtgcaagatgttccagatct
ttaatgctaagtaatctagctccattctagaatatctgcttgattatttc
aatgctctgaagttcttcgtcttgtgtacttttgtccattatttctctgt
cttcttctgtaatcagagacatgatttagtctttatctaaaaccatcata
tctatgccgtctgtgggattgttgtctctttaaatccaagatctagtcat
gccttcctgttttttaagcatttgttgaaattttatttacttaatgacag
ggtattaggtcatgaggccaatgataaattctttctctcataatattggg
ggctaagtttctctcagacagaaaaatgaactgtgactaactttgattcc
ggtcctaggaaccaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_24482918_24484131
seq2: B6Ng01-104C12.b_42_1246 (reverse)

seq1  AGAATTTATCACACCACTCTCCTCAGTAT-GTTAGAAGTTTCCTCATAGG  49
      |||| ||||||| ||||||||  ||  || ||||||||||||||||||||
seq2  AGAAATTATCAC-CCACTCTCTCCACGATAGTTAGAAGTTTCCTCATAGG  49

seq1  CCACAAGGTCAAATTTACATCTTTGAGATAGCATACAAAGCCC-TCTGGA  98
      ||   | |||||||||||||| ||||||  |||  |||||||| ||||||
seq2  CC---AAGTCAAATTTACATC-TTGAGAAGGCAATCAAAGCCCTTCTGGA  95

seq1  CTTGGTTAGTATCACCTTTGCAGTGTCCTACCATTTGATGGACCTTAAGG  148
      ||| ||  |||||| | |||||||||| |||||||||||||| ||||| |
seq2  CTT-GTAGGTATCAAC-TTGCAGTGTCTTACCATTTGATGGA-CTTAA-G  141

seq1  ACATAACTGCCTTTGTTACCAGAGTGCTTAGAGCTCACTGTGCCTTGGAC  198
      |||||||||||||||||||||||||||||||||||||||||  | |||||
seq2  ACATAACTGCCTTTGTTACCAGAGTGCTTAGAGCTCACTGTTGCCTGGAC  191

seq1  CTTGCAAGTCCCATCTCGTCTGAACACTCCCAGATCCATGTGTGACTGGC  248
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  --TGCAAGTCCCATCTCGTCTGAACACTCCCAGATCCATGTGTGACTGGC  239

seq1  CGCCTAACTCTTCATTTTCTGGGATTAACTGACTGTCTTCCTCTGATAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTAACTCTTCATTTTCTGGGATTAACTGACTGTCTTCCTCTGATAGA  289

seq1  CCTACTCTGTGTGTTCTTTCTGTAGACTCTAGAGTCCTCACTTTGTTCCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTCTGTGTGTTCTTTCTGTAGACTCTAGAGTCCTCACTTTGTTCCT  339

seq1  GTTTCTGTTCTTGGCACTCTCACAATCAACATGCACCCATTCATCTTGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGTTCTTGGCACTCTCACAATCAACATGCACCCATTCATCTTGTT  389

seq1  CATTTGCATACAAGTTTGCTGTCTAACTTTCCGCTAAAGTGTAAATCATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCATACAAGTTTGCTGTCTAACTTTCCGCTAAAGTGTAAATCATA  439

seq1  TGAGAGCAAGTCCTGCCTTAGCATATTTGACAGTTTCTGATCATGATTAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCAAGTCCTGCCTTAGCATATTTGACAGTTTCTGATCATGATTAC  489

seq1  TTGGTTTATAAATATTAGCAGGAAGGAAAAGAACTGACTACAGGCTGAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTATAAATATTAGCAGGAAGGAAAAGAACTGACTACAGGCTGAAG  539

seq1  TAATTGAATACACAAAGGGATGAGAGTCCAACCCATAGGCATGGATTCCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAATACACAAAGGGATGAGAGTCCAACCCATAGGCATGGATTCCC  589

seq1  TGAGCCTTAGCTTCTGGTCTTTCCTAGTTTGGCTGATGCCACAAAATAGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTTAGCTTCTGGTCTTTCCTAGTTTGGCTGATGCCACAAAATAGC  639

seq1  ACAAGCTGGGTAGCTGAGGCAGCGGGAATTTATCAGCACCAAATTCTGGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTGGGTAGCTGAGGCAGCGGGAATTTATCAGCACCAAATTCTGGA  689

seq1  GGTTTAACGTCCTATTTCATGGTGCCAGCATGGCCAATTTCTGATGAAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAACGTCCTATTTCATGGTGCCAGCATGGCCAATTTCTGATGAAGC  739

seq1  TTCTCTTCATGGCTTGCCAATGACCACATCATCTCTGTGTTCTCAATGTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCATGGCTTGCCAATGACCACATCATCTCTGTGTTCTCAATGTC  789

seq1  AGGAGTTTATCAATTTGTATAAAGTCATCGAATGCCATACCAAAGGCCCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTTATCAATTTGTATAAAGTCATCGAATGCCATACCAAAGGCCCC  839

seq1  ACTCTCATAACTTTATCTAATTCTGATTACCTTTGAAGTGCCTGTCTATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCATAACTTTATCTAATTCTGATTACCTTTGAAGTGCCTGTCTATA  889

seq1  AATACCATCAACTGAGGGTTAGGGCCTTAATGCATAAGTCGGAGGAGTAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCATCAACTGAGGGTTAGGGCCTTAATGCATAAGTCGGAGGAGTAT  939

seq1  AGTTCAGTTCTCCCTCTCTCTTCCCTCTGTGGGCTCAAGAACGATCAGTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGTTCTCCCTCTCTCTTCCCTCTGTGGGCTCAAGAACGATCAGTA  989

seq1  AACTTCAGTAGAGTGCTCATGTCTTCCTTTGCCCCTTCCTGCTATCCCGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAGTAGAGTGCTCATGTCTTCCTTTGCCCCTTCCTGCTATCCCGT  1039

seq1  GTACTTGTTATACTTTGCAGCTCCTAGTTTCCTATATGGCTGCCTCCACT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGTTATACTTTGCAGCTCCTAGTTTCCTATATGGCTGCCTCCACT  1089

seq1  ATCGATATTGTGAAGTCCATGAGGACTGTCAACTCTTCATTGTGTTACAC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGATATTGTGAAGTCCATGAGGACTGTCAACTCTTCATTGTGTTACAC  1139

seq1  CATGACTGGCAGATAGAAAGGAACTAAATATACATTGACTGAATAAAAAA  1198
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CATGACTGGCAGATAGAAAGGAACTAAATATACTTTGACTGAATAAAAAA  1189

seq1  ACTCTTGAGTGAATTC  1214
      ||||||||||||||||
seq2  ACTCTTGAGTGAATTC  1205

seq1: chr10_24296268_24297442
seq2: B6Ng01-104C12.g_70_1235

seq1  GAATTCCATGCAATTTCAATTTCAATTTAAATCTATAACAAGATGTGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCAATTTCAATTTCAATTTAAATCTATAACAAGATGTGTGG  50

seq1  TAGCTGAAAAATAAGTCCCCATGTTTCAAATTACCAAGATACTGGGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAAAAATAAGTCCCCATGTTTCAAATTACCAAGATACTGGGATTT  100

seq1  TTTAAAATCTGATTTCTGCCTAACTTCCTACCATTGGAAAAGCTCAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATCTGATTTCTGCCTAACTTCCTACCATTGGAAAAGCTCAGGGA  150

seq1  CTTTTAATACAGCAGGAGGGCGGGAAAGTGAGTGTCAGCCAATCAAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATACAGCAGGAGGGCGGGAAAGTGAGTGTCAGCCAATCAAAGAA  200

seq1  CGGAAAGGAAAAAGGAGAAGAGAAGACAGGAGAAAGCGCAATGAGCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAAGGAAAAAGGAGAAGAGAAGACAGGAGAAAGCGCAATGAGCAGAG  250

seq1  ACCTGCCCCTGAGTCAAGCAGCTCTGAAGTGAAAACCAGAACAAGAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCCCTGAGTCAAGCAGCTCTGAAGTGAAAACCAGAACAAGAACAG  300

seq1  ACAGGGAACTAAACCATGACCCATCAGTGCTCTAGAAGTCTGCACTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAACTAAACCATGACCCATCAGTGCTCTAGAAGTCTGCACTGTTT  350

seq1  CCTTCAGGAGGAGAACTTGATCCAGGCAGTTCTCTCCTCCAGGATCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGGAGGAGAACTTGATCCAGGCAGTTCTCTCCTCCAGGATCCTGT  400

seq1  TCTCCATTCTCTCTTCAACAGTTGTCAAGTTTAAGTGAAGAGCTTCAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATTCTCTCTTCAACAGTTGTCAAGTTTAAGTGAAGAGCTTCAGTG  450

seq1  TTTAAGGAAAGCATACTACCCTGTTAAATTTAAAGTTAAAATAATAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGAAAGCATACTACCCTGTTAAATTTAAAGTTAAAATAATAAGCT  500

seq1  CCCCATCTTCCAGATTGCCTTGAAAAGACAAATGTTTTGTACCTGTGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCTTCCAGATTGCCTTGAAAAGACAAATGTTTTGTACCTGTGCAG  550

seq1  GAACTAACAGGGTCTGTGCCTGTTTGCCGACGTATCAAGTGGTCTGGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAACAGGGTCTGTGCCTGTTTGCCGACGTATCAAGTGGTCTGGACA  600

seq1  GATGTGACTCACCAAGAGCAGTAGGGGCTCTCTTTCCAGAGAACCGTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGACTCACCAAGAGCAGTAGGGGCTCTCTTTCCAGAGAACCGTGGC  650

seq1  CTTAGAGGTTGTGTGGTATACCGTGTACCTGTGGTGGGTAATGC-TTTTT  699
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTAGAGGTTGTGTGGTATACCGTGTACCTGTGGTGGGTAATGCTTTTTT  700

seq1  TTTTTTTTCATTCTGCTTCTATATTTTTTTGACCCATCTTATAGATCAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCATTCTGCTTCTATATTTTTTTGACCCATCTTATAGATCAAA  750

seq1  ACTTCTATATTCTGATGAACACAACCACATGTGCAAGATGTTCCAGATCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTATATTCTGATGAACACAACCACATGTGCAAGATGTTCCAGATCT  800

seq1  TTAATGCTAAGTAATCTAGCTCCATTCTAGAATATCTGCTTGATTATTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCTAAGTAATCTAGCTCCATTCTAGAATATCTGCTTGATTATTTC  850

seq1  AATGCTCTGAAGTTCTTCGTCTTGTGTACTTTTGTCCATTATTTTCTCTG  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AATGCTCTGAAGTTCTTCGTCTTGTGTACTTTTGTCCATTA-TTTCTCTG  899

seq1  TCTTCTTCTGTTAATCAGAGACATGATTAAGTCTTTATCTAAAAACCATC  949
      |||||||||| ||||||||||||||||| ||||||||||| |||||||||
seq2  TCTTCTTCTG-TAATCAGAGACATGATTTAGTCTTTATCT-AAAACCATC  947

seq1  ATATCTATGCCGTCTGTGGGATTGTTGTCTCTTTAAATCCAAGATTCTAG  999
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATATCTATGCCGTCTGTGGGATTGTTGTCTCTTTAAATCCAAGA-TCTAG  996

seq1  TCATGCCTTCCTGTTTTAT-AGCATATGTTGAAATTTTTAATTTAACATT  1048
      ||||||||||||||||| | ||||| ||||||||||||  ||||   | |
seq2  TCATGCCTTCCTGTTTTTTAAGCATTTGTTGAAATTTT--ATTT---ACT  1041

seq1  AAATGACATGGGTATAAAGTCATGAGG-CAATGAATAATATCTTC-CTCA  1096
       ||||||| |||||| | ||||||||| ||||||  |||   ||| ||||
seq2  TAATGACA-GGGTATTAGGTCATGAGGCCAATGATAAATTCTTTCTCTCA  1090

seq1  TAAATATGGGGGCTAAGTTTTCTTCTGACAGAAAATATGTACTGTGAC-A  1145
      |||   ||||||||||||||   || ||||||||| ||| |||||||| |
seq2  TAATATTGGGGGCTAAGTTTCTCTCAGACAGAAAA-ATGAACTGTGACTA  1139

seq1  ACTTTAATTCCCCGTTCCCTAGGACCCACA  1175
      ||||| |||  ||| | ||||||| |||||
seq2  ACTTTGATT--CCGGT-CCTAGGAACCACA  1166