BAC Information

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BAC

Clone NameB6Ng01-104O02
Chromosome10 (Build37)
Map Location 21,290,427 - 21,432,873
singlet/doubletdoublet
Overlap gene1700020N01Rik, EG432436
Upstream genePde7b, LOC667202, Ahi1, Myb, LOC100039870, Hbs1l, Aldh8a1, LOC100039906
Downstream geneLOC100039936, LOC628133, Sgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078, Slc2a12, Tbpl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104O02.bB6Ng01-104O02.g
ACCDH913054DH913055
length1,2281,096
definitionDH913054|Mus musculus domesticus DNA, BAC clone: B6Ng01-104O02, 5' end.DH913055|Mus musculus domesticus DNA, BAC clone: B6Ng01-104O02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,290,427 - 21,291,300)(21,431,766 - 21,432,873)
sequence
gaattctcagcaccagaaaaaagtggagtgtgatggcacccactcaaaat
cctatcgtaagggatagagacagaggaatcactagagatctctggccctc
tggccagccagtctcaccaatcattgatttcagactcagtgagagacctc
acctcaaagaacaaggcaaagagcaatcaagaaaaacacctactatcact
atcacagcctacacacacacatactcaagtacataaacaaaaccgtcccc
cccagacacacacacacacacacacacacacagacacacagacacacata
cacacaggcacccccaccacaggcatacacacacagacacacacacacat
acataggtacacatacacaggctcatacacaggcacacatatagaaacac
tcacacggacacactcatgcaggaacacacataggcatacatacacaggc
acatatacaggaacactcacacagacacagtcatgtaggaacacacacag
gcacacatacaggatcattcacacaggcacactcacacaagcacagaggc
atgcacacaggcacatgtacccacacaggcattcacacaggcacacatac
acacacaggcatgcacacaggtgtacatacacaggcacactcacacaggt
actcatacacacacaggtacacacacaggcacacacacaagcacacatac
acacacctaggcacatacacacaaaggcatacacggggtaggcacacaca
caggcacacattgcacacaggcacacattcacacacaggttacacacagg
cacacatacacaagcatatacacacaaagggcacacacacacagtttaaa
ttttaaagaatgaaaagagcaaaattcatgttcaaaggttacaggtcaaa
attcactccacagactaaaaattgtaaggagacaatttagtagtaaaaac
ttaaagatacaaaccacttatcagaagagtttgtttctaaagtgatgaaa
tgctccatttgtgtcagatttttaaaaagacatagagagcaataaaaata
gaaatctgcagttcaaaaaaagagtactttatccctctctaccagtcatt
ttggaatttagaataacctttggtcataattttgaatttagtccaaggtt
acaatctctcgaaaaaaaaatctgtgattgcagattcaaaattgaaagaa
aatatttcagaaaaataagtggaaacac
gaattcttgtgcagggtaatctcaggcattctgttcagcatcctccccag
agcagagcaggcacctgtaggcaggcctcagacggtttgttggtctggct
gtatggccaagacaataagcagctcagagctggagggtaaagtcaataat
gcaaatgtaataaccttagccctgagcaaaagatagagctacattctcaa
atgtggcccaaagctcagacttcaagatgactgtctgctcagagagctca
aactctaaaggtgtgagtgcggtcctggagatgaatgtcggctgtgtgca
agggaggcacttcaggctccagccatgccttcgtccctggtattcactta
gaagaacagcttgggacatttggggtcaagtcgaagctggcctccgcagt
tagggaaggaggggctcctaatgagggaggtcagggcagtgccgggaatg
cagggtgcacagagacaactggaagatccttcttccagagagccaagtcg
ggcgtgcagggtggggcaactaactactcatgtctctagtctgaagggaa
atacggcaagattctgtctgaaagcaatgccttctcccttctcagagagt
ttaaccatggcctacgggacactatctcttccaaagtcctcagatagctg
tttgctgtcaatagcagtgccagaagagagtggcaggtagttgctggagc
atgctgggtacacatagcctttaatgaccacagtggcttcttgggtcaag
ttctaggccagcataccttaacacagcaggcattagttaagatggatcac
catctaggcctggatgtacagaaactgactcacaaggatcaatcaagttc
tccccccattcccctgccctccatcccacggataccagaaaaagaaaaag
aaagaaagagaaggacacaacagcagctccttcttctcttcacagggccc
gcttacagtggagaattccagaaggaggaaacgggcactttgagggggtg
aggatgtgcaaagatccgactctgtttgaggagttcttaatactaccatc
tgccttcgaaaaagaacaattatttattcagtcttgcagcgtgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_21290427_21291300
seq2: B6Ng01-104O02.b_403_1273

seq1  TACACATACACAGGCTCATACACAGGCACACATATAGAAACACTCACACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATACACAGGCTCATACACAGGCACACATATAGAAACACTCACACG  50

seq1  GACACACTCATGCAGGAACACACATAGGCATACATACACAGGCACATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACTCATGCAGGAACACACATAGGCATACATACACAGGCACATATA  100

seq1  CAGGAACACTCACACAGACACAGTCATGTAGGAACACACACAGGCACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACACTCACACAGACACAGTCATGTAGGAACACACACAGGCACACA  150

seq1  TACAGGATCATTCACACAGGCACACTCACACAAGCACAGAGGCATGCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGATCATTCACACAGGCACACTCACACAAGCACAGAGGCATGCACA  200

seq1  CAGGCACATGTACCCACACAGGCATTCACACAGGCACACATACACACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACATGTACCCACACAGGCATTCACACAGGCACACATACACACACA  250

seq1  GGCATGCACACAGGTGTACATACACAGGCACACTCACACAGGTACTCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCACACAGGTGTACATACACAGGCACACTCACACAGGTACTCATA  300

seq1  CACACACAGGTACACACACAGGCACACACACAAGCACACATACACACACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACAGGTACACACACAGGCACACACACAAGCACACATACACACACC  350

seq1  TAGGCACATACACACAAAGGCATACAC-GGGTAGGCACACACACAGGCAC  399
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAGGCACATACACACAAAGGCATACACGGGGTAGGCACACACACAGGCAC  400

seq1  ACA-TGCACACAGGCACACATACACACACAGG-TACACACAGGCACACAT  447
      ||| ||||||||||||||||| |||||||||| |||||||||||||||||
seq2  ACATTGCACACAGGCACACATTCACACACAGGTTACACACAGGCACACAT  450

seq1  ACACAGGCATATACACACAAA-GGCACACACACACAGTTTAAAATTTTTA  496
      ||||| ||||||||||||||| |||||||||||||||||||||   ||| 
seq2  ACACAAGCATATACACACAAAGGGCACACACACACAGTTTAAA---TTTT  497

seq1  AAAGAATGAAAAGAGCAAAAATTCATGTTCAAAGGTAACAGGTCAAAATT  546
      |||||||||||||||| ||||||||||||||||||| |||||||||||||
seq2  AAAGAATGAAAAGAGC-AAAATTCATGTTCAAAGGTTACAGGTCAAAATT  546

seq1  CACTCCACAGACTAAAAAATGTTAAGGAGACAATTTAGTTAAGTAAAAAC  596
      |||||||||||||||||| || |||||||||||||||||  |||||||||
seq2  CACTCCACAGACTAAAAATTG-TAAGGAGACAATTTAGT--AGTAAAAAC  593

seq1  TTAAAGATACAAACACACATATCAAGAAGAGTTTGTTTCTAAAAGTGATG  646
      |||||||||||||| ||| |||| |||||||||||||||| |||||||||
seq2  TTAAAGATACAAAC-CACTTATC-AGAAGAGTTTGTTTCT-AAAGTGATG  640

seq1  AAATGCCTCATTTGTGTCAAGATTTATAAAAAAGACATAGAGAAGCAA-A  695
      ||||||  |||||||||| |||||| | |||||||||||||| ||||| |
seq2  AAATGCTCCATTTGTGTC-AGATTT-TTAAAAAGACATAGAG-AGCAATA  687

seq1  AAAAAAAAAAACAGCAGTGC-AAAAAAGAGAACATTATCACTCAC--ACA  742
      |||| | ||| | ||||| | ||||||||| || ||||| ||| |   ||
seq2  AAAATAGAAATCTGCAGTTCAAAAAAAGAGTACTTTATCCCTCTCTACCA  737

seq1  G-CATTAT-GATATTAG-ATAACTTTTGGCAATAAATTTAGAAATTATGT  789
      | |||| | ||  |||| ||||| |||||  || ||||| ||| ||| ||
seq2  GTCATTTTGGAATTTAGAATAACCTTTGGTCAT-AATTTTGAATTTA-GT  785

seq1  CAAAGGTACACAATC-CTCAGAAAATAAAAATACTGATTCAAAAATCAAA  838
      | |||||  |||||| ||| ||||| ||||    |||||  | | |||||
seq2  CCAAGGT-TACAATCTCTC-GAAAAAAAAATCTGTGATTGCAGATTCAAA  833

seq1  AATTAAAAAAAAAAATTC--AAGAATAAGTGGAAACAC  874
      | | ||| |||| | |||  || |||||||||||||||
seq2  ATTGAAAGAAAATATTTCAGAAAAATAAGTGGAAACAC  871

seq1: chr10_21431766_21432873
seq2: B6Ng01-104O02.g_69_1164 (reverse)

seq1  ACTCAGGCTGCAAGACTGAAATGAATAATGTGTTCTTCTCTGAAGGCAGA  50
      ||||| |||||||||||| ||| |||||| ||||||| |  |||||||||
seq2  ACTCACGCTGCAAGACTG-AATAAATAAT-TGTTCTTTTTCGAAGGCAGA  48

seq1  TGGGTAGTTATTAAGAACTTCCTCAAACAAGAAGTTCGGATCTCTGCCAC  100
      | ||||| |||||||||| ||||||||| |||   |||||||| || |||
seq2  T-GGTAG-TATTAAGAAC-TCCTCAAAC-AGA--GTCGGATCTTTG-CAC  91

seq1  ATCCTCCACCCCCTCAAAGTGCCCGTTTCCTCCTTCTGGAATTCTCCACT  150
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCT-CACCCCCTCAAAGTGCCCGTTTCCTCCTTCTGGAATTCTCCACT  140

seq1  GTAAGCGGGGCCCTGTGAGGAGAAGAGGGAGCTTGCTGTTGTGTCCCTTC  200
      |||||| ||||||||||| ||||||| ||||| ||||||||||| |||||
seq2  GTAAGC-GGGCCCTGTGAAGAGAAGAAGGAGC-TGCTGTTGTGT-CCTTC  187

seq1  TCTTTCTTTTCTTTTTCTTTTTCTGGTATCCGTGGGGATGGAGGGCAGGG  250
      |||||| |||||||||||||||||||||||||| ||||||||||||||||
seq2  TCTTTC-TTTCTTTTTCTTTTTCTGGTATCCGT-GGGATGGAGGGCAGGG  235

seq1  GAAT-GGGGGAGAACTTGATTGATCCTTGTGAGTCAG-TTCTGTACATCC  298
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAATGGGGGGAGAACTTGATTGATCCTTGTGAGTCAGTTTCTGTACATCC  285

seq1  AGGCCTAGATGGTGATCCATCTTAACTAATGCCTGCTGTGTTAAGGTATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTAGATGGTGATCCATCTTAACTAATGCCTGCTGTGTTAAGGTATG  335

seq1  CTGGCCTAGAACTTGACCCAAGAAGCCACTGTGGTCATT-AAGGCTATGT  397
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTGGCCTAGAACTTGACCCAAGAAGCCACTGTGGTCATTAAAGGCTATGT  385

seq1  GTACCCAGCATGCTCCAGCAACTACCTGCCACTCTCTTCTGGCACTGCTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCAGCATGCTCCAGCAACTACCTGCCACTCTCTTCTGGCACTGCTA  435

seq1  TTGACAGCAAACAGCTATCTGAGGACTTTGGAAGAGATAGTGTCCCGTAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGCAAACAGCTATCTGAGGACTTTGGAAGAGATAGTGTCCCGTAG  485

seq1  GCCATGGTTAAACTCTCTGAGAAGGGAGAAGGCATTGCTTTCAGACAGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGGTTAAACTCTCTGAGAAGGGAGAAGGCATTGCTTTCAGACAGAA  535

seq1  TCTTGCCGTATTTCCCTTCAGACTAGAGACATGAGTAGTTAGTTGCCCCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCGTATTTCCCTTCAGACTAGAGACATGAGTAGTTAGTTGCCCCA  585

seq1  CCCTGCACGCCCGACTTGGCTCTCTGGAAGAAGGATCTTCCAGTTGTCTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCACGCCCGACTTGGCTCTCTGGAAGAAGGATCTTCCAGTTGTCTC  635

seq1  TGTGCACCCTGCATTCCCGGCACTGCCCTGACCTCCCTCATTAGGAGCCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACCCTGCATTCCCGGCACTGCCCTGACCTCCCTCATTAGGAGCCC  685

seq1  CTCCTTCCCTAACTGCGGAGGCCAGCTTCGACTTGACCCCAAATGTCCCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCCCTAACTGCGGAGGCCAGCTTCGACTTGACCCCAAATGTCCCA  735

seq1  AGCTGTTCTTCTAAGTGAATACCAGGGACGAAGGCATGGCTGGAGCCTGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTCTTCTAAGTGAATACCAGGGACGAAGGCATGGCTGGAGCCTGA  785

seq1  AGTGCCTCCCTTGCACACAGCCGACATTCATCTCCAGGACCGCACTCACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTCCCTTGCACACAGCCGACATTCATCTCCAGGACCGCACTCACA  835

seq1  CCTTTAGAGTTTGAGCTCTCTGAGCAGACAGTCATCTTGAAGTCTGAGCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGAGTTTGAGCTCTCTGAGCAGACAGTCATCTTGAAGTCTGAGCT  885

seq1  TTGGGCCACATTTGAGAATGTAGCTCTATCTTTTGCTCAGGGCTAAGGTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCCACATTTGAGAATGTAGCTCTATCTTTTGCTCAGGGCTAAGGTT  935

seq1  ATTACATTTGCATTATTGACTTTACCCTCCAGCTCTGAGCTGCTTATTGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTTGCATTATTGACTTTACCCTCCAGCTCTGAGCTGCTTATTGT  985

seq1  CTTGGCCATACAGCCAGACCAACAAACCGTCTGAGGCCTGCCTACAGGTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCCATACAGCCAGACCAACAAACCGTCTGAGGCCTGCCTACAGGTG  1035

seq1  CCTGCTCTGCTCTGGGGAGGATGCTGAACAGAATGCCTGAGATTACCCTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCTGCTCTGGGGAGGATGCTGAACAGAATGCCTGAGATTACCCTG  1085

seq1  CACAAGAATTC  1108
      |||||||||||
seq2  CACAAGAATTC  1096