MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-105A21
Chromosome	10 (Build37)
Map Location	54,485,765 - 54,486,799
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Man1a, LOC100041898
Downstream gene	LOC382460, LOC100041927
Link	Open Mouse BAC browser

Click to get alignment info.

name	Man1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17155 MGI:104677
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041898 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041898
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins pseudo : _no_value

name	LOC382460 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382460
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100041927 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041927
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Man1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802395 GeneID:17155 MGI:104677
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mannosidase 1, alpha transcript_id : NM_008548.3

name	LOC100041927 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260734 GeneID:100041927
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to OTTHUMP00000016594 transcript_id : XM_001477224.1

name	Man1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678788 CCDS:CCDS23848.1 GeneID:17155 MGI:104677
definition	GO_component : GO:0000139 - Golgi membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO:0004571 - mannosyl-oligosaccharide 1,2-alpha-mannosidase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : mannosyl-oligosaccharide alpha-1,2-mannosidase product : mannosidase, alpha, class 1A, member 1 protein_id : NP_032574.1

name	LOC100041927 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260735 GeneID:100041927
definition	codon_start : 1 product : similar to OTTHUMP00000016594 protein_id : XP_001477274.1

name	LOC100041898 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041898
definition	number : 2 pseudo : _no_value

name	LOC100041898 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041898
definition	number : 1 pseudo : _no_value

name	LOC382460 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382460
definition	number : 1 pseudo : _no_value

clone name	MSMg01-102B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108A19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-539A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451I18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-496O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331C20
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-105A21.b	B6Ng01-105A21.g
ACC	DH913180	DH913181
length	1,171	1,026
definition	DH913180\|Mus musculus domesticus DNA, BAC clone: B6Ng01-105A21, 5' end.	DH913181\|Mus musculus domesticus DNA, BAC clone: B6Ng01-105A21, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctgcagtaaacccatctggtgttgggctttttttggttgggagac ttttaataactgcttctatttctttaggggttatgggactatttagatgg tttatctgatcctgatttaactttggtatttggtatctgtctagaaaatt gtgaatttcatccagattttctagttgtgctgtatatcagcttttgtagt aggatctgatgattttttaaaagtttcctcagtttctgttgttatgtttc ccttttcatttctgactttgtttatttggatattgtcatgtgccctctgc taagtctggctaaggttttatctatcttgttgattttatcaaaaacaagc tcctggttttgttgattctttttatagctctttttgtttctacttggttg atttcagctctgagtttgaatatctcttgctgttcttgggtgtatttgct tcttttggttctagagctttcaggagtgctgttaaacttctagtgtatgt atgttctctctagtttctttttggaggcactcagacctaggagtttcact gttttcattgggttctataagtttgggtatgttgtgactttattttcatt aaattctaaagtctctaatttctttctttattccttccttgagcaagtta tcattgagtagggcattgttcagcttccatatgtatgtgggctttctggt gtttgtcttgctattgaagaccagcctaagtccatgctgatctaataggt tgcatgaaattttttcaatcttcttgtatctgttgaggcctgacagatta tatgatcaattttggagaaggtaccatgaagtgctgggaagaacatatat tattttgttttaggatgaaatgtactataaatatctgttaaatcatttgg cccataacttctgctagtttcaatgtatctctgtttagtttgtgtttcta tgacctgtccattgatgagattgggggtgttgaaatctctactattattg tgttgtgggtgcaagtgtgatttgagcttcagtgaagtttcttttatgaa atggggggtgcccttatatttggaggactagaaattccagacttagaagt cttgcagaatttccttgtgagataaaagagcttttctatactttctgata actatggttgagattgatttg	gaattcagacccaccctcactttgcttgctactagcactcactttaattg tctactttcttgcccatgtaatgcgtgggagtcttagtgattggagagcc tctttgcttgctcagcatgactttgcaacctcaaatggcatgggactgta cagaaatgtttgtgaagatgactccctttatagattttgtgagttagctt caatctgattaagcatgtttaattttcttaattgggatcaagaaagctgc aggctttcaaatgacagtggcacttattaggattgccttgaatgataaca acagaagtgggaattaagtttgttattaacacagattggaagagatctat acgtgaaaaaggaatcatgccagttggaaacagaacattatcgccttgta attgaaatatgagcatatccgcgcaggatacatatatgccatttagaatg tgaagagttacctgggagacatgttggaacttcctccttatgggttgtaa ttaaaacaaaggaatttccattcacaccaatcctggaaaagttatttcag agccttatatttagaaaagaaatagctctgttatttttttttcaaacact aaaggatatgaaagaactatgccttctttctccagtggtgattgttttct taataaagggctgaggtaaaattaaacagaagaaaaaaggaggcagagga aagaaagaattgaacagacagggattctaattttaaaaattattttggca agaatgctttactttcaaaaccaatttgcatgcatggttagttactgacc aacaccaaagaaagaataactgattccttcttctccttccagagctgagg gtgcactatggtaatcatgatgtcctctagttaccctctgtcaacattcg gtcctgacactcaatctctgcaagacttgttcaaataacacatgaggggt cctagaagacctaagttttcttcatgaagaatcttagagttacccagaac tatattctccagatcattacctagac
quality values	Open. Hide. 55 61 26 37 61 61 49 40 55 59 61 61 61 61 61 61 61 59 49 61 61 61 61 61 61 28 16 13 13 18 21 13 26 23 44 44 55 61 61 59 59 59 61 59 55 55 59 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 59 52 52 37 30 59 52 44 59 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 59 59 59 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 59 61 59 59 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 55 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 59 59 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 59 61 61 59 59 61 59 59 61 61 59 59 59 59 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 52 61 45 53 61 61 61 46 52 61 43 42 61 61 39 61 61 42 61 61 61 61 45 61 61 61 45 61 61 61 53 38 53 57 57 57 47 40 57 53 53 53 53 52 57 53 53 57 57 57 57 57 45 53 53 57 45 57 57 52 57 53 47 53 57 57 45 53 57 57 57 52 34 53 52 43 57 50 53 57 53 53 53 57 57 57 57 53 53 52 52 53 57 42 57 47 46 53 57 57 50 53 57 53 45 50 53 38 57 43 53 45 53 43 57 53 52 45 53 30 50 45 53 50 45 52 45 35 53 57 53 57 42 42 50 38 57 52 36 45 46 46 53 52 53 42 40 42 53 52 40 25 41 30 53 40 45 53 38 45 37 53 39 41 57 40 42 40 57 33 32 39 41 57 31 52 17 42 46 52 30 37 41 52 52 38 50 36 50 42 42 41 52 29 31 10 38 35 36 53 57 40 57 16 14 33 35 39 14 44 44 37 42 37 37 35 36 40 40 41 36 36 30 44 24 33 30 29 28 37 40 53 57 44 37 57 57 57 44 37 36 27 31 38 30 36 53 40 34 37 40 29 36 30 29 30 30 29 36 34 48 30 47 28 31 30 39 29 29 30 32 25 17 32 40 30 44 38 34 34 35 28 21 31 32 51 51 47 24 30 46 28 38 13 12 12 10 28 26 30 18 33 29 31 48 34 35 39 31 35 29 46 29 27 25 27 41 29 30 27 29 29 37 24 31 34 31 27 51 51 51 33 29 51 51 29 15 24 10 31 20 27 33 51 24 21 31 19 29 35 29 28 33 31 51 46 31 27 28 28 28 41 21 26 23 51 46 28 31 33 27 51 33 33 27 27 51 27 20 35 31 25 29 22 27 30 23 24 26 25 41 23 30 51 31 35 22 23 21 36 17 28 31 22 20 29 25 29 20 51 28 35 20 21 51 28 22 9 19 19 51 19 16 11 19 28 27 35 22 28 33 29 19 20 28 11 21 26 29 9 9 17 14 5 26 19 19 33 44 38 44 14 10 21 14 33 18 14 5 4 7 6 8 7 11 26 30 6 6 11 22 21 20 16 7 5 24 9 6 7 7 23 44 11 4 14 23 22 29 12 11 6 4 8 29 17 42 19 10 13 15 14 9 13 15 5 4 5 9 8 10 6 18 23 11 6 9 30 31 12 6 23 7 8 12 21 8 5 7 4 9 17 17 5 12 12 13 18 6 5 2 2 9 7 22 11 12 5 11 8 5 4 6 6 6 6 13 27 9 13 9 5 9 10 6 18 5 14 16 9 13 7 8 2 3 5 21 6 17 4 4 9 13 10 13 14 4 3 4 10 9 8 5 6 10 7 3 5 7 8 20 12 8 3 1 3 7 8 19 4 9 13 3 5 4 13 6 8 16 5 14 12 18 4 5 8 8 5 5 9 5 9 4 6 5 16 4 3 1 3 6 13 6 4 6 3	Open. Hide. 59 61 61 59 24 18 14 10 21 22 23 19 11 24 24 36 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 55 59 61 61 59 59 61 61 61 61 61 61 61 61 61 59 43 59 41 35 37 36 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 55 61 61 50 55 55 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 53 61 61 61 61 53 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 43 42 50 53 61 61 53 61 61 61 61 61 61 61 61 61 61 61 53 61 61 42 53 53 57 57 53 43 57 57 52 53 47 47 47 42 57 57 57 53 32 57 57 53 57 57 47 52 57 53 46 47 35 53 53 53 45 57 45 53 47 39 45 47 45 47 47 53 57 57 53 47 57 40 41 53 47 40 57 57 43 35 45 57 36 27 41 39 52 57 53 53 53 57 57 43 50 57 57 57 57 22 53 52 38 47 50 43 53 57 45 47 53 43 43 50 36 57 57 57 57 57 57 57 32 41 23 41 46 34 28 47 47 31 46 34 32 57 24 33 40 38 52 43 29 44 33 43 52 50 43 42 50 52 37 46 30 40 47 32 57 33 38 42 50 53 24 52 27 52 57 30 50 34 19 37 47 12 57 57 33 52 50 27 21 32 32 18 53 40 33 57 29 27 52 38 45 16 53 26 36 53 53 46 52 53 31 53 43 40 35 37 53 53 37 57 57 57 57 57 52 19 44 39 39 45 45 44 31 44 19 44 53 57 53 32 48 57 45 30 40 17 33 48 33 29 30 47 28 37 30 30 20 47 57 33 11 13 29 31 32 16 46 28 51 51 44 20 51 51 46 48 39 33 22 11 46 51 22 29 30 25 25 32 30 30 29 27 31 28 28 51 30 22 28 16 46 18 28 29 51 47 43 29 45 18 32 28 51 32 29 30 22 29 29 29 18 21 26 51 18 29 29 33 39 37 19 33 28 33 20 21 37 22 24 28 18 28 34 29 39 40 30 43 46 29 17 25 6 22 24 26 29 28 29 29 23 20 24 33 27 17 14 5 4 10 14 29 28 28 39 21 19 20 17 38 15 29 29 21 36 16 51 30 16 29 28 20 28 28 28 28 43 46 21 33 26 26 29 21 30 35 29 17 41 24 23 25 14 24 16 29 21 28 27 26 29 36 17 29 26 24 40 24 28 12 23 27 10 12 29 28 20 23 6 17 19 24 27 24 22 13 19 29 28 18 10 14 23 19 16 19 33 28 38 34 14 22 6 20 29 29 14 28 28 23 36 6 19 23 13 7 8 8 10 6 14 6 5 22 44 24 27 15 23 11 14 26 29 20 7 18 4 13 28 14 20 10 27 39 30 23 9 6 8 14 16 24 17 15 6 5 12 22 16 9 9 15 13 4 29 15 8 7 5 13 14 11 15 14 21 23 7 20 14 16 16 9 10 12 12 12 20 5 6 12 10 13 12 22 7 4 4 17 12 14 15 21 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_54485765_54486799
seq2: B6Ng01-105A21.g_69_1094 (reverse)

seq1  GTCTAGGTTAATGATCTGGGAGATTATAGTTCTTGGGTACTCTTAAGATT  50
      ||||||| ||||||||| ||||| ||||||||| ||  |||| |||||||
seq2  GTCTAGG-TAATGATCT-GGAGAATATAGTTCTGGGTAACTC-TAAGATT  47

seq1  CTTTCATG-AGAAAACTTAGGTTCTTCTAGGACCCCTTCATTGTTGTTAT  99
      | |||||| |||||||||||| |||||||||||||| ||||   ||||||
seq2  C-TTCATGAAGAAAACTTAGG-TCTTCTAGGACCCC-TCAT--GTGTTAT  92

seq1  TTGAACAAGTTCTTTGCAGAGATTTGAGTGTCAGGACCGAATGTTGACAG  149
      ||||||||||   ||||||||| |||||||||||||||||||||||||||
seq2  TTGAACAAGT--CTTGCAGAGA-TTGAGTGTCAGGACCGAATGTTGACAG  139

seq1  AGGGTAACTAGAGGACATCATGATTACCATAGTGCACCCTCAGCTCTGGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAACTAGAGGACATCATGATTACCATAGTGCACCCTCAGCTCTGGA  189

seq1  AGGAGGGGAAGGAATCAGTTATTCTTTCTTTGGTGTTGGTCAGTAACTAA  249
      |||||  |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAGAAGGAATCAGTTATTCTTTCTTTGGTGTTGGTCAGTAACTAA  239

seq1  CCATGCATGCAAATTGGTTTTGAAAGTAAAGCATTCTTGCC-AAATAATT  298
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCATGCATGCAAATTGGTTTTGAAAGTAAAGCATTCTTGCCAAAATAATT  289

seq1  TTTAAAATTAGAATCCCTGTCTGTTCAATTCTTTCTTTCCTCTGCCTCCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATTAGAATCCCTGTCTGTTCAATTCTTTCTTTCCTCTGCCTCCT  339

seq1  TTTTTCTTCTGTTTAATTTTACCTCAGCCCTTTATTAAGAAAACAATCAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTCTGTTTAATTTTACCTCAGCCCTTTATTAAGAAAACAATCAC  389

seq1  CACTGGAGAAAGAAGGCATAGTTCTTTCATATCCTTTAGTGTTTGAAAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAGAAAGAAGGCATAGTTCTTTCATATCCTTTAGTGTTTGAAAAA  439

seq1  AAAATAACAGAGCTATTTCTTTTCTAAATATAAGGCTCTGAAATAACTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACAGAGCTATTTCTTTTCTAAATATAAGGCTCTGAAATAACTTT  489

seq1  TCCAGGATTGGTGTGAATGGAAATTCCTTTGTTTTAATTACAACCCATAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGATTGGTGTGAATGGAAATTCCTTTGTTTTAATTACAACCCATAA  539

seq1  GGAGGAAGTTCCAACATGTCTCCCAGGTAACTCTTCACATTCTAAATGGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAGTTCCAACATGTCTCCCAGGTAACTCTTCACATTCTAAATGGC  589

seq1  ATATATGTATCCTGCGCGGATATGCTCATATTTCAATTACAAGGCGATAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGTATCCTGCGCGGATATGCTCATATTTCAATTACAAGGCGATAA  639

seq1  TGTTCTGTTTCCAACTGGCATGATTCCTTTTTCACGTATAGATCTCTTCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGTTTCCAACTGGCATGATTCCTTTTTCACGTATAGATCTCTTCC  689

seq1  AATCTGTGTTAATAACAAACTTAATTCCCACTTCTGTTGTTATCATTCAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTGTTAATAACAAACTTAATTCCCACTTCTGTTGTTATCATTCAA  739

seq1  GGCAATCCTAATAAGTGCCACTGTCATTTGAAAGCCTGCAGCTTTCTTGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATCCTAATAAGTGCCACTGTCATTTGAAAGCCTGCAGCTTTCTTGA  789

seq1  TCCCAATTAAGAAAATTAAACATGCTTAATCAGATTGAAGCTAACTCACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATTAAGAAAATTAAACATGCTTAATCAGATTGAAGCTAACTCACA  839

seq1  AAATCTATAAAGGGAGTCATCTTCACAAACATTTCTGTACAGTCCCATGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTATAAAGGGAGTCATCTTCACAAACATTTCTGTACAGTCCCATGC  889

seq1  CATTTGAGGTTGCAAAGTCATGCTGAGCAAGCAAAGAGGCTCTCCAATCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAGGTTGCAAAGTCATGCTGAGCAAGCAAAGAGGCTCTCCAATCA  939

seq1  CTAAGACTCCCACGCATTACATGGGCAAGAAAGTAGACAATTAAAGTGAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGACTCCCACGCATTACATGGGCAAGAAAGTAGACAATTAAAGTGAG  989

seq1  TGCTAGTAGCAAGCAAAGTGAGGGTGGGTCTGAATTC  1035
      |||||||||||||||||||||||||||||||||||||
seq2  TGCTAGTAGCAAGCAAAGTGAGGGTGGGTCTGAATTC  1026

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information