BAC Information

Click to search

BAC

Clone NameB6Ng01-106P22
Chromosome10 (Build37)
Map Location 66,409,864 - 66,410,944
singlet/doubletsinglet
Overlap genenone
Upstream gene1700023F02Rik, 4930407I19Rik
Downstream geneReep3, Jmjd1c, Nrbf2, Egr2, Gm237, LOC100040081, LOC100039618, Zfp365
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106P22.bB6Ng01-106P22.g
ACCDH914581DH914582
length1,1681,065
definitionDH914581|Mus musculus domesticus DNA, BAC clone: B6Ng01-106P22, 5' end.DH914582|Mus musculus domesticus DNA, BAC clone: B6Ng01-106P22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccactttcttgagttctttatatatgttggatattagtccc
tgtcttagtcagggtttctattcctgcacaaacctcaggaccaagaaact
gaggtgctggctgaaggagaaggaaatacagaatgggtagtagaggaagg
tagttataaataccaattaaggccacgtaaccagttgcagaaacgaggat
tataaagtaatatgaatgcccattgtaaatttactaatgcgtttgcgatt
gtacgagggatagttatatcatgttaggcgtatttacaaccttgttattg
tttcatgtgaacatgagatattatttgtgtcaagttgacaaggggtggat
tgtagtggctattcctggttgtcaacttgacaatatttggaatgaactac
aatccggaattggaaggctcaccagtgacccttatctggaggcttggaga
tccttatctggatcttggtttgaagatcttgagccacagtggctatggat
tccagaagattgaatctccgagtttaaggaacacacctttaatctgggct
acacctttcatctgggattaaaggtgtggcggaacacacctttaatctgg
gctacaccttctgctggagacaatataaggacattggaagaagggagtct
agctcttgctcttgctccttcgcctgcttgccgtgtgagactgagtaact
gctagatccttggatttccattcacagctgcgactgaacaattgtaagga
attgggctgccgactgtaagttatcaataaattcctttactaactagaga
ctatccgtaagttctgtgactctagagaaccctgactaatacagtcccct
atctgatttaggataggtaaagatcctttcccaatctgttggtggtcttt
ttgtcttattgacgtgtcttttgcttgcaagaaactttggagtttcatta
gtccatttgtcatctcgatcttacagcacaagccattgctgttcgttcag
gattttttccctgtgccatatctttcaaggctttccccatttctctctat
aaggttcaggtctctggttatgtaagttctgatccatagatggacctagt
ccagggatagatgtatga
gaattcttaaaaaaataaagagttagtaggaccattccccaagtccccag
aggtagagctcagaagcacagagtatctctgtcaggataatagtctcccc
ccttagagagctctcctaacaaaagtaagaaggcacatagccagtgaggt
gagtttggcttattccccaacatgctggttttaaaggcatcatcttgtgg
cttatagctttctctgtgtatctgtgtgcactgatgccaatttcctcttg
gatgcaattttaaccctttaaaaatcatttagcagaacatagtaaaagtc
cagaaactagatttctggaatagcatcggattatctaaatcagtatccat
actcagtatctatgttggagctgaatgtagctcagttggtagagcacttg
cttagcaaccacaaagccctgggtgctagctttggtaccccatttacagt
gcacagtggtatacacctttcatcccaggactcaggagatagaatgggaa
gatttcgaggccagcctgggctacaggatcttaaagaaaacaaaaccaac
acaaaacatagctgttgcattcctaactgctcagtggttctgaatagctg
tacagaatggggcctggccatcaacaattcattatggagaaggagagatt
caagaggcccccgtctctccttgaggacatataggcagttaatggctact
ggaagagggaaagacatttttccctagtggtgtaatcactgaccaatcac
ccatgctactgtgaatgactttcactgacgctcctagtgggtcacaggta
aatgcaattcctgataagcctgaggacctgagtccaatccctgataccca
catggtgaaaggggagaaccgtctcctgaaattgtcctctgacctccaat
gagctctggggtgtgtataactatagctatcactatagatgactatatac
ataccacacacactatatcacatggtagtattttttacactgatataaac
aagcaagtcttaaacaaataaaagagagtttattctggagctatagcatg
acacaggtctagagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_66409864_66410944
seq2: B6Ng01-106P22.g_67_1131 (reverse)

seq1  ACTCTTAGA-CTGTGGTCATGCTTATTTGGCTCCAGAATAAACTCTCTTT  49
      |||| |||| |||| |||||||   | | |||||||||||||||||||||
seq2  ACTC-TAGACCTGT-GTCATGC---TATAGCTCCAGAATAAACTCTCTTT  45

seq1  TATTTGTTTTAAGAACTGTGCTTTGTTTATATCAGTGGTAAAAAATACCT  99
      |||||| |||||| ||| ||| |||||||||||||| |||||||||||  
seq2  TATTTG-TTTAAG-ACT-TGC-TTGTTTATATCAGT-GTAAAAAATAC--  88

seq1  AACCATGTTGATATAGTGTGTGTGGTATGTATATAGTCATCCTTATAGTG  149
       |||||| |||||||||||||||||||||||||||||||||  |||||||
seq2  TACCATG-TGATATAGTGTGTGTGGTATGTATATAGTCATC--TATAGTG  135

seq1  ATAGCTATAGTTATACACACCCCAGAGCTCATTTGGAGGTCAGAGGACAA  199
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATAGCTATAGTTATACACACCCCAGAGCTCA-TTGGAGGTCAGAGGACAA  184

seq1  TTTTCAGGAGACGGTTCTCCCCTTTCACCATGTGGGTATCAGGGATTGGA  249
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTCAGGAGACGGTTCTCCCCTTTCACCATGTGGGTATCAGGGATTGGA  233

seq1  CTCAGGTCCTCAGGCTTATCAGGAATTGCATTTACCTGTGACCCACTAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTCCTCAGGCTTATCAGGAATTGCATTTACCTGTGACCCACTAGG  283

seq1  AGCGTCAGTGAAAGTCATTCACAGTAGCATGGGTGATTGGTCAGTGATTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTCAGTGAAAGTCATTCACAGTAGCATGGGTGATTGGTCAGTGATTA  333

seq1  CACCACTAGGGAAAAATGTCTTTCCCTCTTCCAGTAGCCATTAACTGCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTAGGGAAAAATGTCTTTCCCTCTTCCAGTAGCCATTAACTGCCT  383

seq1  ATATGTCCTCAAGGAGAGACGGGGGCCTCTTGAATCTCTCCTTCTCCATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCCTCAAGGAGAGACGGGGGCCTCTTGAATCTCTCCTTCTCCATA  433

seq1  ATGAATTGTTGATGGCCAGGCCCCATTCTGTACAGCTATTCAGAACCACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTGTTGATGGCCAGGCCCCATTCTGTACAGCTATTCAGAACCACT  483

seq1  GAGCAGTTAGGAATGCAACAGCTATGTTTTGTGTTGGTTTTGTTTTCTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTTAGGAATGCAACAGCTATGTTTTGTGTTGGTTTTGTTTTCTTT  533

seq1  AAGATCCTGTAGCCCAGGCTGGCCTCGAAATCTTCCCATTCTATCTCCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCTGTAGCCCAGGCTGGCCTCGAAATCTTCCCATTCTATCTCCTG  583

seq1  AGTCCTGGGATGAAAGGTGTATACCACTGTGCACTGTAAATGGGGTACCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGGGATGAAAGGTGTATACCACTGTGCACTGTAAATGGGGTACCA  633

seq1  AAGCTAGCACCCAGGGCTTTGTGGTTGCTAAGCAAGTGCTCTACCAACTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGCACCCAGGGCTTTGTGGTTGCTAAGCAAGTGCTCTACCAACTG  683

seq1  AGCTACATTCAGCTCCAACATAGATACTGAGTATGGATACTGATTTAGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACATTCAGCTCCAACATAGATACTGAGTATGGATACTGATTTAGAT  733

seq1  AATCCGATGCTATTCCAGAAATCTAGTTTCTGGACTTTTACTATGTTCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCGATGCTATTCCAGAAATCTAGTTTCTGGACTTTTACTATGTTCTG  783

seq1  CTAAATGATTTTTAAAGGGTTAAAATTGCATCCAAGAGGAAATTGGCATC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGATTTTTAAAGGGTTAAAATTGCATCCAAGAGGAAATTGGCATC  833

seq1  AGTGCACACAGATACACAGAGAAAGCTATAAGCCACAAGATGATGCCTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCACACAGATACACAGAGAAAGCTATAAGCCACAAGATGATGCCTTT  883

seq1  AAAACCAGCATGTTGGGGAATAAGCCAAACTCACCTCACTGGCTATGTGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAGCATGTTGGGGAATAAGCCAAACTCACCTCACTGGCTATGTGC  933

seq1  CTTCTTACTTTTGTTAGGAGAGCTCTCTAAGGGGGGAGACTATTATCCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTACTTTTGTTAGGAGAGCTCTCTAAGGGGGGAGACTATTATCCTG  983

seq1  ACAGAGATACTCTGTGCTTCTGAGCTCTACCTCTGGGGACTTGGGGAATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGATACTCTGTGCTTCTGAGCTCTACCTCTGGGGACTTGGGGAATG  1033

seq1  GTCCTACTAACTCTTTATTTTTTTAAGAATTC  1081
      ||||||||||||||||||||||||||||||||
seq2  GTCCTACTAACTCTTTATTTTTTTAAGAATTC  1065