BAC Information

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BAC

Clone NameB6Ng01-107N12
Chromosome10 (Build37)
Map Location 26,664,964 - 26,763,767
singlet/doubletdoublet
Overlap geneLama2
Upstream geneC030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208, LOC667572, LOC100040349, Arhgap18
Downstream geneLOC100040385, LOC100040961, LOC100040401
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107N12.bB6Ng01-107N12.g
ACCDH915190DH915191
length1,178635
definitionDH915190|Mus musculus domesticus DNA, BAC clone: B6Ng01-107N12, 5' end.DH915191|Mus musculus domesticus DNA, BAC clone: B6Ng01-107N12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,762,579 - 26,763,767)(26,664,964 - 26,665,598)
sequence
gaattcatgtgacttgttgtatatgggtgattcttaagctgaataaggtg
ttaaacagactggctctgacaaaagtcagcatttgctattcatttgagga
agcctgtctcacttgtgttaaaaattaccacagattcctccgatataaga
tgtgtatcttgggtataactatgaagaattgtcagtccaattaagttaca
tgtcattgaaaaatactctccaaagctccactttcagagtgctttgtcct
gaagcatggtattttatttttcttgtttcttcaaaccagattgactttct
tgctatagaaatgcgcaaaggcaaagtcagcttcctctgggatgttggct
ctggagttggccgagtagagtatccagacttgaccatcgacgactcctat
tggtaccgtattgaagcatcaaggtaacttctcagcaatgagtgagataa
ctggatggcatgagaaaaaaaaaaatccattgccatttcatcaatgtagc
tgcatatgcatgtccatgtgtgcagagattatatgctttgtatataaatg
tgtgaaaagtgcatttgttttgcctgttagaaaaggacatgcattcaagg
tataaagccagagaagctattccaatcctaacttcttaatcttatgtttt
tggttatgaacctagacagtaatggctgtgccatttctccagcccctgtc
ttcttaatctgttttctgataagagttagagtcagagaaaagctgactct
ttcacatcttcatctatagatacaagagaaaaaatgctgttacctgttat
taaacagacatgaggacataaaaattgtcattattatcttcattcacttc
tagtctatacagcacctataatcccagacctattctatctgaaaatactg
ggtcccatatctaacacttaagatctacccatagtattttaaatggaaag
tatggagctgaatcaaccctgttctctccaaaactctaatttggtttcaa
catctaagacatgtagctatacatgggaccatattaatcctgctactctc
tagcatatcttctttttccaggttcataatcacattgacccagacgagca
gtagttaggaggagctggtggaagaacgtcaggctggtgttaagcctaac
aaggaaagataaggctaggaactatttt
gaattccctgttattctttttgatctcatctaagctgaattgcacagaag
aggagccccgtgtttctccttggccctgcagttaccctttctgggactat
ttgtgggctgtggctccacagcctactatacttgcatctgactcaaggaa
gggacagtgttagtaagtacaatgatctgagaagaagctacacaggaagt
ggggtcaaggagtcacaggaacacatattttgagatacataccagttgtc
ttgattaatgtgtactattaatatctcaggattatttctcttggttctct
atttttcttagtagtagtagtatcattatttttgttggatactttatgta
tttacatttcaaaagttatcctcttttctggtttctgatcccatctggga
accccctatccgatcccctccttcctgctgcttttatgagggtgccccct
tcccattcactcctatctcactgctctagcattcccctacactaggaaat
caagccttcacaggaagcctcttctcccactgattccagataatgacatc
ctctgctacatatgcagctggagccatggttccctctttgattggtggtt
tagtccctgaaagctttggcggggggggggggtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26762579_26763767
seq2: B6Ng01-107N12.b_47_1224 (reverse)

seq1  AAAATAGTTCCCCTAGCCTTTATCTTTCTCTGATGAGCTTTAACACCAGC  50
      |||||||||  ||||||| ||||||||| ||  | ||  |||||||||||
seq2  AAAATAGTT--CCTAGCC-TTATCTTTC-CTTGTTAGGCTTAACACCAGC  46

seq1  CTGACG-TCTT-CAACAGCTCTTCCTAACTACTGGCTCGTCTGGGTTCAA  98
      |||||| |||| || |||||| ||||||||||| ||||||||||| ||||
seq2  CTGACGTTCTTCCACCAGCTCCTCCTAACTACT-GCTCGTCTGGG-TCAA  94

seq1  TGGTGAATTATGAA-CTGGAAAAAGAAGATATGCTAAGGAGAAGTAGCAG  147
      | ||| |||||||| |||||||||||||||||||||  ||| ||||||||
seq2  T-GTG-ATTATGAACCTGGAAAAAGAAGATATGCTA--GAG-AGTAGCAG  139

seq1  GATTAATATGGTCCCATGTATAGCCTACATGTTCTTAGATGTTGAAAACC  197
      ||||||||||||||||||||||| ||||||| |||||||||||| |||||
seq2  GATTAATATGGTCCCATGTATAG-CTACATG-TCTTAGATGTTG-AAACC  186

seq1  AAATTAGAGTTTTGGAGAGAACAGGGTTGATTCAGCTCCATACTTTCCAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGAGTTTTGGAGAGAACAGGGTTGATTCAGCTCCATACTTTCCAT  236

seq1  TTAAAATACTATGGGTAGATCTTAAGTGTTAGATATGGGACCCAGTATTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATACTATGGGTAGATCTTAAGTGTTAGATATGGGACCCAGTATTT  286

seq1  TCAGATAGAATAGGTCTGGGATTATAGGTGCTGTATAGACTAGAAGTGAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATAGAATAGGTCTGGGATTATAGGTGCTGTATAGACTAGAAGTGAA  336

seq1  TGAAGATAATAATGACAATTTTTATGTCCTCATGTCTGTTTAATAACAGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATAATAATGACAATTTTTATGTCCTCATGTCTGTTTAATAACAGG  386

seq1  TAACAGCATTTTTTCTCTTGTATCTATAGATGAAGATGTGAAAGAGTCAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCATTTTTTCTCTTGTATCTATAGATGAAGATGTGAAAGAGTCAG  436

seq1  CTTTTCTCTGACTCTAACTCTTATCAGAAAACAGATTAAGAAGACAGGGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCTGACTCTAACTCTTATCAGAAAACAGATTAAGAAGACAGGGG  486

seq1  CTGGAGAAATGGCACAGCCATTACTGTCTAGGTTCATAACCAAAAACATA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAAATGGCACAGCCATTACTGTCTAGGTTCATAACCAAAAACATA  536

seq1  AGATTAAGAAGTTAGGATTGGAATAGCTTCTCTGGCTTTATACCTTGAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAGAAGTTAGGATTGGAATAGCTTCTCTGGCTTTATACCTTGAAT  586

seq1  GCATGTCCTTTTCTAACAGGCAAAACAAATGCACTTTTCACACATTTATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTCCTTTTCTAACAGGCAAAACAAATGCACTTTTCACACATTTATA  636

seq1  TACAAAGCATATAATCTCTGCACACATGGACATGCATATGCAGCTACATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGCATATAATCTCTGCACACATGGACATGCATATGCAGCTACATT  686

seq1  GATGAAATGGCAATGGATTTTTTTTTTTCTCATGCCATCCAGTTATCTCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAATGGCAATGGATTTTTTTTTTTCTCATGCCATCCAGTTATCTCA  736

seq1  CTCATTGCTGAGAAGTTACCTTGATGCTTCAATACGGTACCAATAGGAGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTGCTGAGAAGTTACCTTGATGCTTCAATACGGTACCAATAGGAGT  786

seq1  CGTCGATGGTCAAGTCTGGATACTCTACTCGGCCAACTCCAGAGCCAACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCGATGGTCAAGTCTGGATACTCTACTCGGCCAACTCCAGAGCCAACA  836

seq1  TCCCAGAGGAAGCTGACTTTGCCTTTGCGCATTTCTATAGCAAGAAAGTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAGGAAGCTGACTTTGCCTTTGCGCATTTCTATAGCAAGAAAGTC  886

seq1  AATCTGGTTTGAAGAAACAAGAAAAATAAAATACCATGCTTCAGGACAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGTTTGAAGAAACAAGAAAAATAAAATACCATGCTTCAGGACAAA  936

seq1  GCACTCTGAAAGTGGAGCTTTGGAGAGTATTTTTCAATGACATGTAACTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCTGAAAGTGGAGCTTTGGAGAGTATTTTTCAATGACATGTAACTT  986

seq1  AATTGGACTGACAATTCTTCATAGTTATACCCAAGATACACATCTTATAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGACTGACAATTCTTCATAGTTATACCCAAGATACACATCTTATAT  1036

seq1  CGGAGGAATCTGTGGTAATTTTTAACACAAGTGAGACAGGCTTCCTCAAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGAATCTGTGGTAATTTTTAACACAAGTGAGACAGGCTTCCTCAAA  1086

seq1  TGAATAGCAAATGCTGACTTTTGTCAGAGCCAGTCTGTTTAACACCTTAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGCAAATGCTGACTTTTGTCAGAGCCAGTCTGTTTAACACCTTAT  1136

seq1  TCAGCTTAAGAATCACCCATATACAACAAGTCACATGAATTC  1189
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTAAGAATCACCCATATACAACAAGTCACATGAATTC  1178

seq1: chr10_26664964_26665598
seq2: B6Ng01-107N12.g_67_701

seq1  GAATTCCCTGTTATTCTTTTTGATCTCATCTAAGCTGAATTGCACAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGTTATTCTTTTTGATCTCATCTAAGCTGAATTGCACAGAAG  50

seq1  AGGAGCCCCGTGTTTCTCCTTGGCCCTGCAGTTACCCTTTCTGGGACTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCCCGTGTTTCTCCTTGGCCCTGCAGTTACCCTTTCTGGGACTAT  100

seq1  TTGTGGGCTGTGGCTCCACAGCCTACTATACTTGCATCTGACTCAAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGGCTGTGGCTCCACAGCCTACTATACTTGCATCTGACTCAAGGAA  150

seq1  GGGACAGTGTTAGTAAGTACAATGATCTGAGAAGAAGCTACACAGGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGTGTTAGTAAGTACAATGATCTGAGAAGAAGCTACACAGGAAGT  200

seq1  GGGGTCAAGGAGTCACAGGAACACATATTTTGAGATACATACCAGTTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCAAGGAGTCACAGGAACACATATTTTGAGATACATACCAGTTGTC  250

seq1  TTGATTAATGTGTACTATTAATATCTCAGGATTATTTCTCTTGGTTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTAATGTGTACTATTAATATCTCAGGATTATTTCTCTTGGTTCTCT  300

seq1  ATTTTTCTTAGTAGTAGTAGTATCATTATTTTTGTTGGATACTTTATGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTTAGTAGTAGTAGTATCATTATTTTTGTTGGATACTTTATGTA  350

seq1  TTTACATTTCAAAAGTTATCCTCTTTTCTGGTTTCTGATCCCATCTGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATTTCAAAAGTTATCCTCTTTTCTGGTTTCTGATCCCATCTGGGA  400

seq1  ACCCCCTATCCGATCCCCTCCTTCCTGCTGCTTTTATGAGGGTGCCCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCTATCCGATCCCCTCCTTCCTGCTGCTTTTATGAGGGTGCCCCCT  450

seq1  TCCCATTCACTCCTATCTCACTGCTCTAGCATTCCCCTACACTAGGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTCACTCCTATCTCACTGCTCTAGCATTCCCCTACACTAGGAAAT  500

seq1  CAAGCCTTCACAGGAAGCCTCTTCTCCCACTGATTCCAGATAATGACATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTTCACAGGAAGCCTCTTCTCCCACTGATTCCAGATAATGACATC  550

seq1  CTCTGCTACATATGCAGCTGGAGCCATGGTTCCCTCTTTGATTGGTGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTACATATGCAGCTGGAGCCATGGTTCCCTCTTTGATTGGTGGTT  600

seq1  TAGTCCCTGAAAGCTTTGGCGGGGGGGGGGGGTCT  635
      |||||||||||||||||||||||||||||||||||
seq2  TAGTCCCTGAAAGCTTTGGCGGGGGGGGGGGGTCT  635