BAC Information

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BAC

Clone NameB6Ng01-113H17
Chromosome10 (Build37)
Map Location 121,751,690 - 121,752,565
singlet/doubletsinglet
Overlap genenone
Upstream gene4930505D03Rik, LOC100043498, Gns, Rassf3, LOC100043500, Tbk1, Xpot, D930020B18Rik, BC048403, Srgap1, EG216394, LOC668272, Tmem5, LOC100043513, LOC668275
Downstream geneAvpr1a, Ppm1h, D630033A02Rik, Mon2, Usp15, LOC100042958, AI851790
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113H17.bB6Ng01-113H17.g
ACCDH919264DH919265
length8771,097
definitionDH919264|Mus musculus domesticus DNA, BAC clone: B6Ng01-113H17, 5' end.DH919265|Mus musculus domesticus DNA, BAC clone: B6Ng01-113H17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcaaggatggccataaattttatactactcctttttctttctt
ttttcttttttttttttttacacatttaatcttgaaatactactcctttt
tcttgttgcttatatatttcatttaatctctatcaaataatttggtttac
cacgttttatgtttgagagtcttttcaatagctgtgtgtggtggctcatg
acttcaatcctggcactcaggagtctaacacagaagaactgtggtagaaa
ttacaggaacctgtcaccaataatttcattcattgatagcattaaaatgg
attttaagatacagtgagaccagtccaaagtgttctataaaccatgtgcc
aaagtcctgtgtttgtccaccatgagagattaatgttgattcgggccttc
tctggccatcagaacggaaccagaaggtctttcatttgcaagaatgtgat
cttggcagcaagaacactacaatagaacacagtctctgaggggacctgag
aaatatctctggcttcctaacacttttgggtgtaagtagaattgaggact
ctcgggagagtatacaccacgggcacattgctgtgaaatgcagaatctac
tttgtgactgtgccctctggaatgctctggattgcctcacgggcacattt
acccctcagtttccttcctcatagattgtttgacgtggatggtggctgtg
gaaagaggaaagagaaaaagttgaagaaattgaggttttaagaataataa
cttgaggtggtggagtaattatttactagaaatagtctctcaaaagttct
atgatattggagaaaatattataaaggtaagacaattcttagaagacgga
tcttttgttctttttttccacgtgtat
gaattctcacctgaggaatatcgaatggctgagaaacacctgaaaaaatg
ttcagcatccttaatcatcagggaaaatgcaaatcaaaacagccctgaga
ttccatctcacaccagtcagaatggctaagatcaaaaactcaggtgacag
aagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaactactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaacggaggatcccacaatacctctcctggg
catatatccagaagatgttccaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggaggacatcatcctgagtgaggtaacccaatcacaa
aagaactcacatgatatgtacttactgataagtagatattagcgcagaaa
cttagaatacccaagatacaagatacaaagcacaggaaactcaagaagaa
caaagaccaaaggtgtgaacactttgtcccttcttagaattggggaacaa
aacacccatggaaggagttatagagacaaagtttggagctgagacaaaag
gatggaccatctagagactgccatatccagggatccatcccataatcagc
cgccaaacgcagaccccattgcatacactagcaagattttgctgaaagga
tcctgatatagctgtctcttgtgagactatgccggggcctagcaaacaca
gaagtgtatgctcacagtcagctattggatggatcacagggcccccaatg
gaggagctagagaaagtatccaaggagctaagggatctgcaaccctatag
gtgtaacaatcttatggaactaaccagttaccccggaagctctttgactc
catgcttgcatatggtatccaaaaaatagggcttatatttgggcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_121751690_121752565
seq2: B6Ng01-113H17.b_49_925

seq1  GAATTCTGCAAGGATGGCCATAAATTTTATACTACTCCTTTTTCTTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCAAGGATGGCCATAAATTTTATACTACTCCTTTTTCTTTCTT  50

seq1  TTTTCTTTTTTTTTTTTTTACACATTTAATCTTGAAATACTACTCCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTTTTTTTTTTACACATTTAATCTTGAAATACTACTCCTTTT  100

seq1  TCTTGTTGCTTATATATTTCATTTAATCTCTATCAAATAATTTGGTTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTGCTTATATATTTCATTTAATCTCTATCAAATAATTTGGTTTAC  150

seq1  CACGTTTTATGTTTGAGAGTCTTTTCAATAGCTGTGTGTGGTGGCTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTTTTATGTTTGAGAGTCTTTTCAATAGCTGTGTGTGGTGGCTCATG  200

seq1  ACTTCAATCCTGGCACTCAGGAGTCTAACACAGAAGAACTGTGGTAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAATCCTGGCACTCAGGAGTCTAACACAGAAGAACTGTGGTAGAAA  250

seq1  TTACAGGAACCTGTCACCAATAATTTCATTCATTGATAGCATTAAAATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGAACCTGTCACCAATAATTTCATTCATTGATAGCATTAAAATGG  300

seq1  ATTTTAAGATACAGTGAGACCAGTCCAAAGTGTTCTATAAACCATGTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGATACAGTGAGACCAGTCCAAAGTGTTCTATAAACCATGTGCC  350

seq1  AAAGTCCTGTGTTTGTCCACCATGAGAGATTAATGTTGATTCGGGCCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCTGTGTTTGTCCACCATGAGAGATTAATGTTGATTCGGGCCTTC  400

seq1  TCTGGCCATCAGAACGGAACCAGAAGGTCTTTCATTTGCAAGAATGTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCCATCAGAACGGAACCAGAAGGTCTTTCATTTGCAAGAATGTGAT  450

seq1  CTTGGCAGCAAGAACACTACAATAGAACACAGTCTCTGAGGGGACCTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCAGCAAGAACACTACAATAGAACACAGTCTCTGAGGGGACCTGAG  500

seq1  AAATATCTCTGGCTTCCTAACACTTTTGGGTGTAAGTAGAATTGAGGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTCTGGCTTCCTAACACTTTTGGGTGTAAGTAGAATTGAGGACT  550

seq1  CTCGGGAGAGTATACACCACGGGCACATTGCTGTGAAATGCAGAATCTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGAGAGTATACACCACGGGCACATTGCTGTGAAATGCAGAATCTAC  600

seq1  TTTGTGACTGTGCCCTCTGGAATGCTCTGGATTGCCTCACGGGCACATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGACTGTGCCCTCTGGAATGCTCTGGATTGCCTCACGGGCACATTT  650

seq1  ACCCCTCAG-TTCCTTCCTCATAGATTGTTTGACGTGGATGGTGGCTGTG  699
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTCAGTTTCCTTCCTCATAGATTGTTTGACGTGGATGGTGGCTGTG  700

seq1  GAAAGAGGAAAGAGAAAAAGTTGAAGAAATTGAGGTTTTAAGAATAATAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGGAAAGAGAAAAAGTTGAAGAAATTGAGGTTTTAAGAATAATAA  750

seq1  CTTGAGGTGGTGGAGTAATTATTTACTAGAAATAGTCTCTCAAAAGTTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGTGGTGGAGTAATTATTTACTAGAAATAGTCTCTCAAAAGTTCT  800

seq1  ATGATATTGGAGAAAATATCATAAAGGTAAGACAATCCTTAGAAGACCGA  849
      ||||||||||||||||||| |||||||||||||||| |||||||||| ||
seq2  ATGATATTGGAGAAAATATTATAAAGGTAAGACAATTCTTAGAAGACGGA  850

seq1  TCTTTTGTTCTTTTTTTCCACGTGTAT  876
      |||||||||||||||||||||||||||
seq2  TCTTTTGTTCTTTTTTTCCACGTGTAT  877