BAC Information

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BAC

Clone NameB6Ng01-114G18
Chromosome10 (Build37)
Map Location 89,999,590 - 90,103,824
singlet/doubletdoublet
Overlap geneAnks1b
Upstream geneEG627532, Slc17a8, Scyl2, Actr6, E030041M21Rik, E530015N03Rik, LOC100043039, LOC544719
Downstream geneApaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114G18.bB6Ng01-114G18.g
ACCDH919945DH919946
length1,159261
definitionDH919945|Mus musculus domesticus DNA, BAC clone: B6Ng01-114G18, 5' end.DH919946|Mus musculus domesticus DNA, BAC clone: B6Ng01-114G18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,102,653 - 90,103,824)(89,999,590 - 89,999,827)
sequence
gaattcttacagctttttagagtaaagtaagattttacaactctcatgat
ttccttctacatttgggccacagttacactgtccagaccacaggcattcc
cattgtgcccaaggggctacagtggacgctcactctattgcttgtttttg
ttaacgcagagaatttcagcttaacttaactctttccccctaacaaaagc
tgaatataaagctagctctgcattccttcatccagtttgcatatcaccgc
tcgatcactggtttggtgagcagagctccttgctcttcctctgcttaaac
tgcctattccagtacatcccttctcctcaccatcgcatgacatcattctc
tcccgcccccataatgagcaggagcgccatagacttctctaccaaataaa
tgttaagcctgacccctccttgccaaatccagttggttcttttcggccct
gaacccaagtactttctggctaacttggctggtgactgcaatgttggaca
atacccgatttccagcatgtctgtcactgaagcaagttctgttagtcagg
tcttctctaacttactgacagtgaaagcatagtcaaatcacatagatggg
gcaaacgagaccaggagtaaaacatattcatcattctcgggatgtagtta
gctatataccatttggccatagttcgtggatattaaatatagtgtcttca
gcaaattacctcccaatatttttgtggccaaaatgaattatgaagttgtc
acacttggggtggtgttagttcatgacgatgttagaaagccatgccatgg
aacgtcaagtgcagacgagacagacaagctattgagcgcagcacccaaca
tcgcacaggtggttttggggaaagcaatcagagagaaagtggatttgcta
gtcagtaactaaacaacttattagcacgatcaaagcccgggaagggggtg
tttttcagctgctgcccttttcctgatgagaactgacagatccgggctct
ttataccttctaaatcacagaatgaagagaaatcacttatatcctatgcg
aggtagctgaagccaaagcttgcggaacaatggggaaactgttatgtatg
gagttccggctcagaatggacactgaaatgaatgtacggaatgagtagtg
cgttctgct
aatttctctgaaaacacacacacacgcacgcacacacacacacacatgca
cacacaaatggtatgagctgaaggctaagctttcccgtcatcttctcatc
aaagatctcatgtaatttaattttgatttcttgtattttattgttgttaa
cactactaaaaaaatgtttattacttggttgcctttgtagtaacaaagac
aggtgtgtgtgagtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgt
gggggtgttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_90102653_90103824
seq2: B6Ng01-114G18.b_45_1203 (reverse)

seq1  AGCAGGAAACGCAACTACTCATTTCTGTTTGGTCATCTCAGTGGTCTATC  50
      |||||  ||||| |||||||| ||| ||    |||| ||||||  |  ||
seq2  AGCAG--AACGC-ACTACTCA-TTCCGTACATTCATTTCAGTGTCCATTC  46

seq1  TGAGCTGAAAACCTCCATACATAACAGTCTCCCCATGGTCAGACAAGCTT  100
      ||||| | ||  |||||||||||||||| ||||||| ||    |||||||
seq2  TGAGCCGGAA--CTCCATACATAACAGTTTCCCCATTGTTCCGCAAGCTT  94

seq1  TGGCTTCAGCTACCTCGCATAGGATATTAGGTGATTTCTCTTCATTCTGT  150
      |||||||||||||||||||||||||| || ||||||||||||||||||||
seq2  TGGCTTCAGCTACCTCGCATAGGATA-TAAGTGATTTCTCTTCATTCTGT  143

seq1  GATTTAGGAAGGTAATAAAGAGCCCCGGATCTGTCAGTTCTCATCAGGAA  200
      |||||| |||||| |||||||| |||||||||||||||||||||||||||
seq2  GATTTA-GAAGGT-ATAAAGAG-CCCGGATCTGTCAGTTCTCATCAGGAA  190

seq1  AAGGGCAGCAGCTGGAAAAACACCCCCCTCCCCGGGCCTTTGATCGTGCT  250
      ||||||||||||| ||||||||||||| ||||  || |||||||||||||
seq2  AAGGGCAGCAGCT-GAAAAACACCCCCTTCCC--GGGCTTTGATCGTGCT  237

seq1  AATAAGTTGTTTAGTTACTGACTAGCAAATCCACTTTCTCTCTGATTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTTGTTTAGTTACTGACTAGCAAATCCACTTTCTCTCTGATTGCT  287

seq1  TTCCCCAAAACCACCTGTGCGATGTTGGGTGCTGCGCTCAATAGCTTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAAAACCACCTGTGCGATGTTGGGTGCTGCGCTCAATAGCTTGTC  337

seq1  TGTCTCGTCTGCACTTGACGTTCCATGGCATGGCTTTCTAACATCGTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCGTCTGCACTTGACGTTCCATGGCATGGCTTTCTAACATCGTCAT  387

seq1  GAACTAACACCACCCCAAGTGTGACAACTTCATAATTCATTTTGGCCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAACACCACCCCAAGTGTGACAACTTCATAATTCATTTTGGCCACA  437

seq1  AAAATATTGGGAGGTAATTTGCTGAAGACACTATATTTAATATCCACGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTGGGAGGTAATTTGCTGAAGACACTATATTTAATATCCACGAA  487

seq1  CTATGGCCAAATGGTATATAGCTAACTACATCCCGAGAATGATGAATATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGCCAAATGGTATATAGCTAACTACATCCCGAGAATGATGAATATG  537

seq1  TTTTACTCCTGGTCTCGTTTGCCCCATCTATGTGATTTGACTATGCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTCCTGGTCTCGTTTGCCCCATCTATGTGATTTGACTATGCTTTC  587

seq1  ACTGTCAGTAAGTTAGAGAAGACCTGACTAACAGAACTTGCTTCAGTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCAGTAAGTTAGAGAAGACCTGACTAACAGAACTTGCTTCAGTGAC  637

seq1  AGACATGCTGGAAATCGGGTATTGTCCAACATTGCAGTCACCAGCCAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGCTGGAAATCGGGTATTGTCCAACATTGCAGTCACCAGCCAAGT  687

seq1  TAGCCAGAAAGTACTTGGGTTCAGGGCCGAAAAGAACCAACTGGATTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGAAAGTACTTGGGTTCAGGGCCGAAAAGAACCAACTGGATTTGG  737

seq1  CAAGGAGGGGTCAGGCTTAACATTTATTTGGTAGAGAAGTCTATGGCGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGGGGTCAGGCTTAACATTTATTTGGTAGAGAAGTCTATGGCGCT  787

seq1  CCTGCTCATTATGGGGGCGGGAGAGAATGATGTCATGCGATGGTGAGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCATTATGGGGGCGGGAGAGAATGATGTCATGCGATGGTGAGGAG  837

seq1  AAGGGATGTACTGGAATAGGCAGTTTAAGCAGAGGAAGAGCAAGGAGCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATGTACTGGAATAGGCAGTTTAAGCAGAGGAAGAGCAAGGAGCTC  887

seq1  TGCTCACCAAACCAGTGATCGAGCGGTGATATGCAAACTGGATGAAGGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACCAAACCAGTGATCGAGCGGTGATATGCAAACTGGATGAAGGAA  937

seq1  TGCAGAGCTAGCTTTATATTCAGCTTTTGTTAGGGGGAAAGAGTTAAGTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGCTAGCTTTATATTCAGCTTTTGTTAGGGGGAAAGAGTTAAGTT  987

seq1  AAGCTGAAATTCTCTGCGTTAACAAAAACAAGCAATAGAGTGAGCGTCCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAAATTCTCTGCGTTAACAAAAACAAGCAATAGAGTGAGCGTCCA  1037

seq1  CTGTAGCCCCTTGGGCACAATGGGAATGCCTGTGGTCTGGACAGTGTAAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCCCCTTGGGCACAATGGGAATGCCTGTGGTCTGGACAGTGTAAC  1087

seq1  TGTGGCCCAAATGTAGAAGGAAATCATGAGAGTTGTAAAATCTTACTTTA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCCAAATGTAGAAGGAAATCATGAGAGTTGTAAAATCTTACTTTA  1137

seq1  CTCTAAAAAGCTGTAAGAATTC  1172
      ||||||||||||||||||||||
seq2  CTCTAAAAAGCTGTAAGAATTC  1159

seq1: chr10_89999590_89999827
seq2: B6Ng01-114G18.g_73_310

seq1  AATTTCTCTGAAAACACACACACACGCACGCACACACACACACACATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTCTGAAAACACACACACACGCACGCACACACACACACACATGCA  50

seq1  CACACAAATGGTATGAGCTGAAGGCTAAGCTTTCCCGTCATCTTCTCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAATGGTATGAGCTGAAGGCTAAGCTTTCCCGTCATCTTCTCATC  100

seq1  AAAGATCTCATGTAATTTAATTTTGATTTCTTGTATTTTATTGTTGTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCTCATGTAATTTAATTTTGATTTCTTGTATTTTATTGTTGTTAA  150

seq1  CACTACTAAAAAAATGTTTATTACTTGGTTGCCTTTGTAGTAACAAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACTAAAAAAATGTTTATTACTTGGTTGCCTTTGTAGTAACAAAGAC  200

seq1  AGGTGTGTGTGAGTGTGTGTGTATGTGTGTGTGTGTGT  238
      ||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGTGTGAGTGTGTGTGTATGTGTGTGTGTGTGT  238