BAC Information

Click to search

BAC

Clone NameB6Ng01-120G21
Chromosome10 (Build37)
Map Location 103,921,840 - 103,922,571
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667701, EG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120G21.bB6Ng01-120G21.g
ACCDH924377DH924378
length9981,160
definitionDH924377|Mus musculus domesticus DNA, BAC clone: B6Ng01-120G21, 5' end.DH924378|Mus musculus domesticus DNA, BAC clone: B6Ng01-120G21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaagttaggctccagagaaccaaataatgctacttaaaatta
gcacagagctaaacagagagttctcaactgagaaatctcaaatggctgaa
aagatcttaaagacatgttcaacattcttagtcatcagggaactacaaat
caaaaggaccctgagattccatctcacaccaatcagaatggctaagatca
aaaaattgcaggagaatcaggaaaggatataaaaagaaaatatccaatta
aaaacatacagaaaagcagcaacaacaagaaaaacaaaaacaaaaatgca
ggttacagcagatgctggcaagggtgtgaagaaagaggaacactcctcca
ttgctggtggactgcaagctggtaaaaaccacttttggaaatcaatctgg
tagttcctgagaaaactggaaataattctaactgaagacccagctctacc
actactgaacacatacccaaaagatgcttcaacttataaccaggacacat
gctccactatgtttatagcaaccttatttataatagccagaagctgaaaa
cagctcagatgtccctcaacaaagaatggatacagcaaatgtgcatttac
acaatggagtactactcagctattaaaaaacattgacttcatttgcaggc
aaatggatgaaactaggaaatatcatcctgagtgaggtaaccaagacaca
aaataacacacatgttatggactcactgataagtggatattaggccaaaa
gctcagaatacccacgatacaaccatcagactatatggagtttaggagga
agaaagaccagggcgtgaaattttcagtcctgaataaaggtttgaacagg
aagaacacaggaagtggggtggtacctggtagggagacaggaggggagag
gaaaaggggggcagatcaggtactggagggacaggagagaggtgcagaga
gtaaggaaattgataaaaatatgtagcagtgggggatgaggactgggg

gaattctttgttcagttctgagccccatttttaatgggattatttgattt
tttggagtccaccttcttgagttctttatatatattgtatattattcccc
tatctgatttaggataggtgaagatcctttcccaatctgttggtggcctt
tttgtcttattgacagtgtcttttgccttacagatgctttgcaatttttt
aaatatactttttattaggtatttttttcatttgcatttccaatgctgtc
ccaaaagtcccccaaaccctcgcccacccattcctctacccgcccactcc
aactttttggccctggcgttcccctgtactgaggcattaaaaagtttgca
tgaccaatgggcctctctttccactgatggcagactacactatcttctga
tacatatgcagctagagacacaagctccgggggggtactggttagttcat
atttttgttccacctatagggttgcagattctcccagatccttgggtact
ctctctagctcctccattgggggccctgggatccatccaatacctgattg
tgatcatctacttctgtgtttccaaggccccggcagagtctcacaagaga
gagctatatcagggtcctttcagcaaaatgttgctagtgtatgcagtggt
gtcagcttttggaggctgattatgaaaaaatgttaagcacccttaaatat
cagggaaatgcaaatcaaaacaacactgagattctacctcacaccagtca
gaatggctaagatcaaaaattcgggtgacagcagatgctgtcgaggatgt
ggagaaagagaaacattcctccattgttggtggattgcaagcttgtacaa
ccactctggaatcagtctggtcgatcctcagaaattgaacatagtactac
cggaagatctagcaataaccactcctgggcaaatatcagaaagatttcca
accggtaaaaagacacatgctccattatgttcatagcagcttatttatta
taagcaagaaactggaaagaaccaaacgcccctccacagagaatggaatc
agaaaatgtggatatttacccatggagatactccccgccttaaaaaagaa
atttgaattctaggcaaatgatgagccgtgaggtactctcggggtagcta
cacactcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103921840_103922571
seq2: B6Ng01-120G21.b_45_776

seq1  GAATTCAAGAAGTTAGGCTCCAGAGAACCAAATAATGCTACTTAAAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAAGTTAGGCTCCAGAGAACCAAATAATGCTACTTAAAATTA  50

seq1  GCACAGAGCTAAACAGAGAGTTCTCAACTGAGAAATCTCAAATGGCTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGAGCTAAACAGAGAGTTCTCAACTGAGAAATCTCAAATGGCTGAA  100

seq1  AAGATCTTAAAGACATGTTCAACATTCTTAGTCATCAGGGAACTACAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCTTAAAGACATGTTCAACATTCTTAGTCATCAGGGAACTACAAAT  150

seq1  CAAAAGGACCCTGAGATTCCATCTCACACCAATCAGAATGGCTAAGATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGACCCTGAGATTCCATCTCACACCAATCAGAATGGCTAAGATCA  200

seq1  AAAAATTGCAGGAGAATCAGGAAAGGATATAAAAAGAAAATATCCAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTGCAGGAGAATCAGGAAAGGATATAAAAAGAAAATATCCAATTA  250

seq1  AAAACATACAGAAAAGCAGCAACAACAAGAAAAACAAAAACAAAAATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATACAGAAAAGCAGCAACAACAAGAAAAACAAAAACAAAAATGCA  300

seq1  GGTTACAGCAGATGCTGGCAAGGGTGTGAAGAAAGAGGAACACTCCTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACAGCAGATGCTGGCAAGGGTGTGAAGAAAGAGGAACACTCCTCCA  350

seq1  TTGCTGGTGGACTGCAAGCTGGTAAAAACCACTTTTGGAAATCAATCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGTGGACTGCAAGCTGGTAAAAACCACTTTTGGAAATCAATCTGG  400

seq1  TAGTTCCTGAGAAAACTGGAAATAATTCTAACTGAAGACCCAGCTCTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCCTGAGAAAACTGGAAATAATTCTAACTGAAGACCCAGCTCTACC  450

seq1  ACTACTGAACACATACCCAAAAGATGCTTCAACTTATAACCAGGACACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTGAACACATACCCAAAAGATGCTTCAACTTATAACCAGGACACAT  500

seq1  GCTCCACTATGTTTATAGCAACCTTATTTATAATAGCCAGAAGCTGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACTATGTTTATAGCAACCTTATTTATAATAGCCAGAAGCTGAAAA  550

seq1  CAGCTCAGATGTCCCTCAACAAAGAATGGATACAGCAAATGTGCATTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCAGATGTCCCTCAACAAAGAATGGATACAGCAAATGTGCATTTAC  600

seq1  ACAATGGAGTACTACTCAGCTATTAAAAAACATTGACTTCATTTGCAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGAGTACTACTCAGCTATTAAAAAACATTGACTTCATTTGCAGGC  650

seq1  AAATGGATGAAACTAGGAAATATCATCCTGAGTGAGGTAACCAAGACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGATGAAACTAGGAAATATCATCCTGAGTGAGGTAACCAAGACACA  700

seq1  AAATAACACACATGTTATGGACTCACTGATAA  732
      ||||||||||||||||||||||||||||||||
seq2  AAATAACACACATGTTATGGACTCACTGATAA  732


| Home | SequenceCutter | Blast | Download |