BAC Information

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BAC

Clone NameB6Ng01-121B01
Chromosome10 (Build37)
Map Location 86,478,834 - 86,621,278
singlet/doubletdoublet
Overlap genenone
Upstream geneFbxo7, Syn3, Timp3, EG627035, LOC672902, LOC100041419, EG382395, Hsp90b1, Nt5dc3, Fabp3-ps1, C630002B14Rik, Stab2
Downstream gene1700113H08Rik, Ascl1, Pah, LOC100041517, ENSMUSG00000058934, Igf1, Tyms-ps, Pmch, 4930547N16Rik, EG626115, Nup37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121B01.bB6Ng01-121B01.g
ACCDH924845DH924846
length4961,061
definitionDH924845|Mus musculus domesticus DNA, BAC clone: B6Ng01-121B01, 5' end.DH924846|Mus musculus domesticus DNA, BAC clone: B6Ng01-121B01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,478,834 - 86,479,335)(86,620,611 - 86,621,278)
sequence
tcagatagaggaacccaagaagctcaagtgtctcgagctttggcaacctg
atgacggtctccaaacccagtgtcgtagaggcctcattaaatcagcagta
caatggggcgtgttgaaacacggcgcagctgtacggcggaggaatgttgt
ctgtgggatgcaggccttgccctttattgggtggggctgaggtggctctg
ggcagagggcacatactgcctcccatccctggaatgtggctggcagctga
cagccaccctacttgtctggaaggggtggtcttcaccatagattaggtct
tgaaagctgcctctttgcaagcctttttgttgtgtgactcaaaagagtcg
ctcagctggcacaattgctgtcaacaaagggaagttgtctttgaacaggg
acagggcagggttccctgggaggtgtggaatgtatgtgtgtgcatgtgcg
tgtgtgtgtgtgtgtgtgtaagtgggttgtactgggacctgcacac
gaattcactttgccttggggggaaatttctaggtaacccacctctccccc
aaattaaagagacatcacttgctactaacccttatgctatgatcaagaga
tatgttgttgtcgttgctgttgtcgtcgtcattgtcatggatagacatag
taagccatagaataaaaagctagaactcttaggtatgcctactgcaggca
ctcttgactacttataacattcagaagttacaggaaattttggagaaaac
aaggaaacaccacggcccttgttgagcaggaaatccagattcgtgtaaaa
tggatttatagctaaagacacttcttataaaactattctgtaggatagag
aaattggcagattgttcaatggttaaaagtgctggatcttcttccagggg
gttggaagtccattcccagcccctatgtagcaggtcacagtcctctgtaa
ctctggtttcaaaaggtcatatggcctcttatgatcttcaagggaaccag
atatgcatgcagggcacagccatacataaagattttttaaaaataagtaa
atttaaaactgcaaaacattctgtaggaataatcaactctagatatataa
aaatttatattccaaaataatttctcagaaatctagcccaatggtgtcag
aaactgtaaaatacactaaacaatgtcagtagcagtgtaatttcatatat
aataacataagaaaagttcttctgaaattaaaaattatctgaaattattt
acaatgttgaaaatgaaattgctaaaagcaaaggctttttaaaatgtcct
tatatttatagaaaataagccaaaaaaaatttatgatcaattaagagata
acattaatgaagcattattcactatattgtgcaaatttgatacaaaatat
cattttttaatttgtaagttctgatttatactcctatattggtattattt
gtgggtgcatttatataagatattttatttaatgtctatataataatatt
gatattcatttatgaaggtattttaaagctaaaatgttaagtttttatta
ccatttaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_86478834_86479335
seq2: B6Ng01-121B01.b_47_548

seq1  GAATTCTCAGATAGAGGAACCCAAGAAGCTCAAGTGTCTCGAGCTTTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGATAGAGGAACCCAAGAAGCTCAAGTGTCTCGAGCTTTGGC  50

seq1  AACCTGATGACGGTCTCCAAACCCAGTGTCGTAGAGGCCTCATTAAATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGATGACGGTCTCCAAACCCAGTGTCGTAGAGGCCTCATTAAATCA  100

seq1  GCAGTACAATGGGGCGTGTTGAAACACGGCGCAGCTGTACGGCGGAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTACAATGGGGCGTGTTGAAACACGGCGCAGCTGTACGGCGGAGGAA  150

seq1  TGTTGTCTGTGGGATGCAGGCCTTGCCCTTTATTGGGTGGGGCTGAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCTGTGGGATGCAGGCCTTGCCCTTTATTGGGTGGGGCTGAGGTG  200

seq1  GCTCTGGGCAGAGGGCACATACTGCCTCCCATCCCTGGAATGTGGCTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGGCAGAGGGCACATACTGCCTCCCATCCCTGGAATGTGGCTGGC  250

seq1  AGCTGACAGCCACCCTACTTGTCTGGAAGGGGTGGTCTTCACCATAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACAGCCACCCTACTTGTCTGGAAGGGGTGGTCTTCACCATAGATT  300

seq1  AGGTCTTGAAAGCTGCCTCTTTGCAAGCCTTTTTGTTGTGTGACTCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTGAAAGCTGCCTCTTTGCAAGCCTTTTTGTTGTGTGACTCAAAA  350

seq1  GAGTCGCTCAGCTGGCACAATTGCTGTCAACAAAGGGAAGTTGTCTTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCGCTCAGCTGGCACAATTGCTGTCAACAAAGGGAAGTTGTCTTTGA  400

seq1  ACAGGGACAGGGCAGGGTTCCCTGGGAGGTGTGGAATGTATGTGTGTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGACAGGGCAGGGTTCCCTGGGAGGTGTGGAATGTATGTGTGTGCA  450

seq1  TGTGCGTGTGTGTGTGTGTGTGTGTAAGTGGGTTGTACTGGGTCATGCAC  500
      |||||||||||||||||||||||||||||||||||||||||| | |||||
seq2  TGTGCGTGTGTGTGTGTGTGTGTGTAAGTGGGTTGTACTGGGACCTGCAC  500

seq1  AC  502
      ||
seq2  AC  502

seq1: chr10_86620611_86621278
seq2: B6Ng01-121B01.g_67_734 (reverse)

seq1  TAGTGTATTTTACAGTTTCTGACACCATTGGGCTAGATTTCTGAGAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTATTTTACAGTTTCTGACACCATTGGGCTAGATTTCTGAGAAATT  50

seq1  ATTTTGGAATATAAATTTTTATATATCTAGAGTTGATTATTCCTACAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGAATATAAATTTTTATATATCTAGAGTTGATTATTCCTACAGAA  100

seq1  TGTTTTGCAGTTTTAAATTTACTTATTTTTAAAAAATCTTTATGTATGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGCAGTTTTAAATTTACTTATTTTTAAAAAATCTTTATGTATGGC  150

seq1  TGTGCCCTGCATGCATATCTGGTTCCCTTGAAGATCATAAGAGGCCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCTGCATGCATATCTGGTTCCCTTGAAGATCATAAGAGGCCATAT  200

seq1  GACCTTTTGAAACCAGAGTTACAGAGGACTGTGACCTGCTACATAGGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTTGAAACCAGAGTTACAGAGGACTGTGACCTGCTACATAGGGGC  250

seq1  TGGGAATGGACTTCCAACCCCCTGGAAGAAGATCCAGCACTTTTAACCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATGGACTTCCAACCCCCTGGAAGAAGATCCAGCACTTTTAACCAT  300

seq1  TGAACAATCTGCCAATTTCTCTATCCTACAGAATAGTTTTATAAGAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAATCTGCCAATTTCTCTATCCTACAGAATAGTTTTATAAGAAGTG  350

seq1  TCTTTAGCTATAAATCCATTTTACACGAATCTGGATTTCCTGCTCAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGCTATAAATCCATTTTACACGAATCTGGATTTCCTGCTCAACAA  400

seq1  GGGCCGTGGTGTTTCCTTGTTTTCTCCAAAATTTCCTGTAACTTCTGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCGTGGTGTTTCCTTGTTTTCTCCAAAATTTCCTGTAACTTCTGAAT  450

seq1  GTTATAAGTAGTCAAGAGTGCCTGCAGTAGGCATACCTAAGAGTTCTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAGTAGTCAAGAGTGCCTGCAGTAGGCATACCTAAGAGTTCTAGC  500

seq1  TTTTTATTCTATGGCTTACTATGTCTATCCATGACAATGACGACGACAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTCTATGGCTTACTATGTCTATCCATGACAATGACGACGACAAC  550

seq1  AGCAACGACAACAACATATCTCTTGATCATAGCATAAGGGTTAGTAGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACGACAACAACATATCTCTTGATCATAGCATAAGGGTTAGTAGCAA  600

seq1  GTGATGTCTCTTTAATTTGGGGGAGAGGTGGGTTACCTAGAAATTTCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTCTCTTTAATTTGGGGGAGAGGTGGGTTACCTAGAAATTTCCCC  650

seq1  CCAAGGCAAAGTGAATTC  668
      ||||||||||||||||||
seq2  CCAAGGCAAAGTGAATTC  668