BAC Information

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BAC

Clone NameB6Ng01-125L06
Chromosome10 (Build37)
Map Location 85,683,716 - 85,684,705
singlet/doubletsinglet
Overlap geneSyn3
Upstream geneEG666974, Btbd11, EG626858, LOC626878, LOC669723, LOC626940, Pwp1, Prdm4, Ascl4, D10Wsu52e, Bpil2, Fbxo7
Downstream geneTimp3, EG627035, LOC672902, LOC100041419, EG382395, Hsp90b1, Nt5dc3, Fabp3-ps1, C630002B14Rik, Stab2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125L06.bB6Ng01-125L06.g
ACCDH928264DH928265
length991194
definitionDH928264|Mus musculus domesticus DNA, BAC clone: B6Ng01-125L06, 5' end.DH928265|Mus musculus domesticus DNA, BAC clone: B6Ng01-125L06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacggaatggcttgagctgcactgaacagtgaactgagaataga
ggtaaccacgttaccatttgaatccggaaccaaacctcaacattcatttt
ctataaatgcaatgtaaatagaatcagtcctttctctgttttgtttttta
aatgagacacaacccttctggatcatctagagcctaaattaaaacctcta
catgttctaaaattaatgaaccagaacagagttagaaaatagaaaccctt
tttgaataaaaacactattttatccagtttgttggaccaggatttgtttt
ctgtctctttaaaaaatgggaaaacatccagagaggaaaatatcactcaa
tatacaaagcactagaaaggacataaatttaaagatggatgccacctgta
gctccttcagtgggatattttcattttgttttatgtacgtattctatgga
gctatttaattacctagttttttcttttctttttaagactatctcatgga
agataatcctattgaaaaggctgttttattctttttaatggggtgtttta
ttctttttaatgccttaataataaccaataccccatttgttcatgctagt
ttatgttgatagttttctattgatgaatatttaagtttcttctacaattt
tactttgacaaataatgtgtctgtgagatttgaatttgaatgtttgcact
ttatctagacttaaagttttcctgaaacaatgaaggtatttctatatcct
ctgctccatgggaacatcataatcatttttaattcttgtcactggtcatg
aaaatactaattttctccataccctaaagtgctagggtgtggagaaatca
ctgtagaaaaaagtcctgacataggctattatggaagaaaaagagagtat
tcagttcacagttttcaagggtcagggcatggtggtgacatctgactgaa
tcttggtgaggacctttgacaacagtggaatagggatggaa
cattgcgttcctaacccaaagtcaacatagctccaaacaaaagcacggtc
aggcctttgacagcagtactccagtttcttggtgccaacctctgtcttag
ttagggttttattactgtgaagagaggtgtgtttataaaaagatgaagag
agaagggatatgtttggtggacgtgtagtcaggtatggggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_85683716_85684705
seq2: B6Ng01-125L06.b_48_1038

seq1  GAATTCCACGGAATGGCTTGAGCTGCACTGAACAGTGAACTGAGAATAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACGGAATGGCTTGAGCTGCACTGAACAGTGAACTGAGAATAGA  50

seq1  GGTAACCACGTTACCATTTGAATCCGGAACCAAACCTCAACATTCATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACCACGTTACCATTTGAATCCGGAACCAAACCTCAACATTCATTTT  100

seq1  CTATAAATGCAATGTAAATAGAATCAGTCCTTTCTCTGTTTTGTTTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAATGCAATGTAAATAGAATCAGTCCTTTCTCTGTTTTGTTTTTTA  150

seq1  AATGAGACACAACCCTTCTGGATCATCTAGAGCCTAAATTAAAACCTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGACACAACCCTTCTGGATCATCTAGAGCCTAAATTAAAACCTCTA  200

seq1  CATGTTCTAAAATTAATGAACCAGAACAGAGTTAGAAAATAGAAACCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCTAAAATTAATGAACCAGAACAGAGTTAGAAAATAGAAACCCTT  250

seq1  TTTGAATAAAAACACTATTTTATCCAGTTTGTTGGACCAGGATTTGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATAAAAACACTATTTTATCCAGTTTGTTGGACCAGGATTTGTTTT  300

seq1  CTGTCTCTTTAAAAAATGGGAAAACATCCAGAGAGGAAAATATCACTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTTTAAAAAATGGGAAAACATCCAGAGAGGAAAATATCACTCAA  350

seq1  TATACAAAGCACTAGAAAGGACATAAATTTAAAGATGGATGCCACCTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAAAGCACTAGAAAGGACATAAATTTAAAGATGGATGCCACCTGTA  400

seq1  GCTCCTTCAGTGGGATATTTTCATTTTGTTTTATGTACGTATTCTATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTCAGTGGGATATTTTCATTTTGTTTTATGTACGTATTCTATGGA  450

seq1  GCTATTTAATTACCTAGTTTTTTCTTTTCTTTTTAAGACTATCTCATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTAATTACCTAGTTTTTTCTTTTCTTTTTAAGACTATCTCATGGA  500

seq1  AGATAATCCTATTGAAAAGGCTGTTTTATTCTTTTTAATGGGGTGTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATCCTATTGAAAAGGCTGTTTTATTCTTTTTAATGGGGTGTTTTA  550

seq1  TTCTTTTTAATGCCTTAATAATAACCAATACCCCATTTGTTCATGCTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTAATGCCTTAATAATAACCAATACCCCATTTGTTCATGCTAGT  600

seq1  TTATGTTGATAGTTTTCTATTGATGAATATTTAAGTTTCTTCTACAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTGATAGTTTTCTATTGATGAATATTTAAGTTTCTTCTACAATTT  650

seq1  TACTTTGACAAATAATGTGTCTGTGAGATTTGAATTTGAATGTTTGCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGACAAATAATGTGTCTGTGAGATTTGAATTTGAATGTTTGCACT  700

seq1  TTATCTAGACTTAAAGTTTTCCTGAAACAATGAAGGTATTTCTATATCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTAGACTTAAAGTTTTCCTGAAACAATGAAGGTATTTCTATATCCT  750

seq1  CTGCTCCATGGGAACATCATAATCA-TTTTAATTCTTGTCACTGGTCATG  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTGCTCCATGGGAACATCATAATCATTTTTAATTCTTGTCACTGGTCATG  800

seq1  AAAATACTAA-TTTCTCCATACCCTAAAGTGCTAGGGTGTGGAGAAATCA  848
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTAATTTTCTCCATACCCTAAAGTGCTAGGGTGTGGAGAAATCA  850

seq1  CTGTAGAAAAAAGTCCTGACATAGGCTATTAATGAAGAAAAAGAGAGTTA  898
      |||||||||||||||||||||||||||||||  |||||||||||||| ||
seq2  CTGTAGAAAAAAGTCCTGACATAGGCTATTATGGAAGAAAAAGAGAG-TA  899

seq1  TTCAGTTCACAGTTTTCAAGGGTCAGGGCATGGTGGTGACA-CTGACTGA  947
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTCAGTTCACAGTTTTCAAGGGTCAGGGCATGGTGGTGACATCTGACTGA  949

seq1  ATTCTGGTGAGGACCTTTGGACAAACAGT-GAATAGGGATGGAA  990
      ||  |||||||||||||| ||| |||||| ||||||||||||||
seq2  ATCTTGGTGAGGACCTTT-GAC-AACAGTGGAATAGGGATGGAA  991