BAC Information

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BAC

Clone NameB6Ng01-125M09
Chromosome10 (Build37)
Map Location 29,990,644 - 29,991,616
singlet/doubletsinglet
Overlap genenone
Upstream geneEchdc1, Rnf146, Rspo3, EG630389, Rpl12, LOC623064, LOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik
Downstream geneLOC212815, Trmt11, Hint3, Ncoa7, LOC382354, Hey2, LOC654431, EG432448
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125M09.bB6Ng01-125M09.g
ACCDH928315DH928316
length1,161978
definitionDH928315|Mus musculus domesticus DNA, BAC clone: B6Ng01-125M09, 5' end.DH928316|Mus musculus domesticus DNA, BAC clone: B6Ng01-125M09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcgtcagggaaatgcaaatcaaaacaaccctgagat
tctacctcaaacgagtcacaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgtaagctcgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggaaatagtactactggaggatcctgcaatacctctcctgggc
atatatccagaagatgttccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagagtaatgaatacagaaaatgtggtacatttacacaatg
gaatgctactcagctattaaaaagaatgaatttatgaaagtcctagacaa
atggatggacctggagggcatcatcatgagtgaggtaacacaatcacaaa
agaactcacatgatatgtactcactgataagtggatatttgcccagaaac
ttagaatacccaagatacaagatacaatttgcaaaacacgtgaaactcaa
gaagaacaaagaccaaagtgtggacactttgtttcttcttagaattggaa
acaaaacatccatggaagaagttacagagacaaagtttggagctgagaca
aaaggattgaccatctagagactgccatacccggggatccatcccataat
cagcctccaaacgctgacaccattgcatacactagcaagattttgctgaa
agaaccctgatatagctgtctcttgtgaggctatgccagggcctagcaac
acagaagtggatgctcacagtcatctataggatggaacacatccaataga
tgtgagagctagagaaagcacccaggagctacggatcttgcaccctatag
gtggaacaccatatgactaccagtaccccctggacttgtgtctctagctg
caaattttcagagattgcctagtcggcatcattggaagagagtcattgtc
ttgcaactttattgctcagtcagcaccgcagggccaaaatggggagtggg
tgggtagagga
gaattcagatctgcatacctgcaaggcaaggtgtgtatgaactgagcagt
cactcaggctttttttcttatttccaatgatgattaataagaaattggtg
caaatatattataaacaagtgcaacttttaggtaagtttagaatgtagtc
acattgctaactgcttttctaagtatttataaatgtgacatggaaagaat
ttaaatgtaatttgtagaaaaccatacctccctattgctaagaggaacaa
ctatgtcatctcaatttatagtgttttttctttaaaaagcaaataattat
gtgatatacttgagtttttagagcagattatcccagtagtcaatatatga
catgctaaaattggatataacatttggccaagttttctgactcactcaca
aaaactggaagaaaaatggattgtcttcaagatagttttagtgcggaggc
caaaagaaacattcctgtaacttcataaaaatatcaatgttatttattgc
agatattttgagaaggtgacaaaaacaaaattatatagtgttatacatag
catttcttaatgcccactcaagagtgattcatttattctaacagctcctt
tctcatgtaagttgctcactctctcttcttgtacttcactttggtcacaa
aagtaccacttatcacccctcttgctccatcctgcagctgcaggagaaaa
gagggcacattcggagcatcaagtttaaggtgattttaaagatcagatgt
ggactggagagaagggtcagtagttaagagcactgactgctcttccagag
gtcctgagttcaattcccagcagccacatggtggctcacaaccatctgta
atggggatctgatgccctcttccagtgtgtctgaagacagcgacagtgta
cacacatacattaaaagaatatatatatatatatatatatatatatatat
atatactatatatatatcttgtacatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_29990644_29991616
seq2: B6Ng01-125M09.g_67_1044 (reverse)

seq1  GTATGTAC-----ATATATATA-TATATATATATATATATATATATATAT  44
      ||||||||     ||||||||| |||||||||||||||||||||||||||
seq2  GTATGTACAAGATATATATATAGTATATATATATATATATATATATATAT  50

seq1  ATATATATTTTCTTTTTAATGTATGTGTGTACACTGTCGCTGTCTTCAGA  94
      |||||||| ||| |||||||||||||||||||||||||||||||||||||
seq2  ATATATATATTC-TTTTAATGTATGTGTGTACACTGTCGCTGTCTTCAGA  99

seq1  CACACTGGAAGAGGGCATCAGATCCCCATTACAGATGGTTGTGAGCCACC  144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGGAAGAGGGCATCAGATCCCCATTACAGATGGTTGTGAGCCACC  149

seq1  ATGTGGCTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC  199

seq1  TCTTAACTACTGACCCTTCTCTCCAGTCCACATCTGATCTTTAAAATCAC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACTACTGACCCTTCTCTCCAGTCCACATCTGATCTTTAAAATCAC  249

seq1  CTTAAACTTGATGCTCCGAATGTGCCCTCTTTTCTCCTGCAGCTGCAGGA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACTTGATGCTCCGAATGTGCCCTCTTTTCTCCTGCAGCTGCAGGA  299

seq1  TGGAGCAAGAGGGGTGATAAGTGGTACTTTTGTGACCAAAGTGAAGTACA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCAAGAGGGGTGATAAGTGGTACTTTTGTGACCAAAGTGAAGTACA  349

seq1  AGAAGAGAGAGTGAGCAACTTACATGAGAAAGGAGCTGTTAGAATAAATG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAGAGTGAGCAACTTACATGAGAAAGGAGCTGTTAGAATAAATG  399

seq1  AATCACTCTTGAGTGGGCATTAAGAAATGCTATGTATAACACTATATAAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTCTTGAGTGGGCATTAAGAAATGCTATGTATAACACTATATAAT  449

seq1  TTTGTTTTTGTCACCTTCTCAAAATATCTGCAATAAATAACATTGATATT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTGTCACCTTCTCAAAATATCTGCAATAAATAACATTGATATT  499

seq1  TTTATGAAGTTACAGGAATGTTTCTTTTGGCCTCCGCACTAAAACTATCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAAGTTACAGGAATGTTTCTTTTGGCCTCCGCACTAAAACTATCT  549

seq1  TGAAGACAATCCATTTTTCTTCCAGTTTTTGTGAGTGAGTCAGAAAACTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACAATCCATTTTTCTTCCAGTTTTTGTGAGTGAGTCAGAAAACTT  599

seq1  GGCCAAATGTTATATCCAATTTTAGCATGTCATATATTGACTACTGGGAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAATGTTATATCCAATTTTAGCATGTCATATATTGACTACTGGGAT  649

seq1  AATCTGCTCTAAAAACTCAAGTATATCACATAATTATTTGCTTTTTAAAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCTCTAAAAACTCAAGTATATCACATAATTATTTGCTTTTTAAAG  699

seq1  AAAAAACACTATAAATTGAGATGACATAGTTGTTCCTCTTAGCAATAGGG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACACTATAAATTGAGATGACATAGTTGTTCCTCTTAGCAATAGGG  749

seq1  AGGTATGGTTTTCTACAAATTACATTTAAATTCTTTCCATGTCACATTTA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATGGTTTTCTACAAATTACATTTAAATTCTTTCCATGTCACATTTA  799

seq1  TAAATACTTAGAAAAGCAGTTAGCAATGTGACTACATTCTAAACTTACCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACTTAGAAAAGCAGTTAGCAATGTGACTACATTCTAAACTTACCT  849

seq1  AAAAGTTGCACTTGTTTATAATATATTTGCACCAATTTCTTATTAATCAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTGCACTTGTTTATAATATATTTGCACCAATTTCTTATTAATCAT  899

seq1  CATTGGAAATAAGAAAAAAAGCCTGAGTGACTGCTCAGTTCATACACACC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGAAATAAGAAAAAAAGCCTGAGTGACTGCTCAGTTCATACACACC  949

seq1  TTGCCTTGCAGGTATGCAGATCTGAATTC  973
      |||||||||||||||||||||||||||||
seq2  TTGCCTTGCAGGTATGCAGATCTGAATTC  978