BAC Information

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BAC

Clone NameB6Ng01-126L16
Chromosome10 (Build37)
Map Location 38,281,224 - 38,282,628
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100040915, Lama4, 1700025K23Rik, Tube1, EG624165, LOC100040964, Fyn, LOC629337
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126L16.bB6Ng01-126L16.g
ACCDH929022DH929023
length1,152528
definitionDH929022|Mus musculus domesticus DNA, BAC clone: B6Ng01-126L16, 5' end.DH929023|Mus musculus domesticus DNA, BAC clone: B6Ng01-126L16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacacttgttgatcagcctcagggggaagaaatggccaaataag
gtaatagaccttgtggctagctttagggatgcaactaacagtttttagca
gaaagagaaaaaaaaatgagaaaacatgccagagccatgtttgtcatgct
tgggccctctagagccccttcagaagtgtaagaggtttgaggaaagaaga
gaatgtagacacaataatgagagaagagctccgaaacagatgagaaggtc
ctgagaagacattcagttggcaacacactgactgtgcaagcagagaagcc
tggttgtccctccagaggacacttatcaggagctgggtatgaaggcacat
gccagcaatcctactgcaggaaagataaagaagagtatccatggggttcg
gtgcccagacagtggagccaatacatggaggacacctgcctcaaaaagta
agatgggaaagttgtgaaaagatacatgatattgacctttgtcttccaca
cacaaacatgcataagacttaggaggacaaagaaggagaagtggaacaca
tttccttatgatcttaaccactatctcatgactgaagggctcacatgaac
tataacgctaaaccaattaaatacactgtatttagcattgaaagcaggag
tcatctcagtcaataaaccgttttagagtcaatccatattgtttataact
atcattttacataccaaaaaataatcagaaaatagatcaaggcttacata
gcatttatttaataaataatataaatgttaaacataaatgtagcaaaaat
tgtcaagtcaacaaatttctaaaaccaggaatcatagatgataaagcaag
cccaggacaccctgtgatgtgaccctctgtgcagacctggtaaatctgtg
tatgaaattatggatataactagagtttgagaaagtgaacattgttccaa
aaccacaagtgtctgagactgaaaattctgaacctgtggtccgtctctca
gtgcgttttctgttgaaccatcagcaaaccgtgggcagagcataaaagct
tcgcagagtttgcaaatggacagctcctagttgcaaatgacaggctccct
cccttgtagcatattttttattttccgaatgggagctatggataattcag
ta

ctgatctttccaagacttgtaatatgaaggggtgttatatttgttgaagg
tttcagcatctaatgtatttttttctttgagtttgtttatatagtgggtt
actttaatggatctctgtatattgaaccatctttgcattcctgggatgaa
gcttacttgattgtggtgaatggtggttttgatatgttctgggatttggt
ttgtgagagtttcattatcgatattcataagtgaaattggtctgaagttc
ttttctctgttgagtctttctgtggtttaggtatcagtgcaatggtctct
tcggttttaagctctttaaagtcaaagagctcaagctctttgagctttag
aatgaattagatagcattccttttgttcttctgtttctattttgtggaat
agtttgaagagtattggcattaggtctttgaaggtcatatagcattctgc
actaaaaccatctggccctggtttttttttttggtggggacttttagact
gcttctacgttcctagggtttatgggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_38281224_38282628
seq2: B6Ng01-126L16.b_48_1199

seq1  GAATTCAACACTTGTTGATCAGCCTCAGGGGGAAGAAATGGCCAAATAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACACTTGTTGATCAGCCTCAGGGGGAAGAAATGGCCAAATAAG  50

seq1  GTAATAGACCTTGTGGCTAGCTTTAGGGATGCAACTAACAGTTTTTAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAGACCTTGTGGCTAGCTTTAGGGATGCAACTAACAGTTTTTAGCA  100

seq1  GAAAGAGAAAAAAAAATGAGAAAACATGCCAGAGCCATGTTTGTCATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAAAAAAAAATGAGAAAACATGCCAGAGCCATGTTTGTCATGCT  150

seq1  TGGGCCCTCTAGAGCCCCTTCAGAAGTGTAAGAGGTTTGAGGAAAGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCCTCTAGAGCCCCTTCAGAAGTGTAAGAGGTTTGAGGAAAGAAGA  200

seq1  GAATGTAGACACAATAATGAGAGAAGAGCTCCGAAACAGATGAGAAGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTAGACACAATAATGAGAGAAGAGCTCCGAAACAGATGAGAAGGTC  250

seq1  CTGAGAAGACATTCAGTTGGCAACACACTGACTGTGCAAGCAGAGAAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAGACATTCAGTTGGCAACACACTGACTGTGCAAGCAGAGAAGCC  300

seq1  TGGTTGTCCCTCCAGAGGACACTTATCAGGAGCTGGGTATGAAGGCACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTCCCTCCAGAGGACACTTATCAGGAGCTGGGTATGAAGGCACAT  350

seq1  GCCAGCAATCCTACTGCAGGAAAGATAAAGAAGAGTATCCATGGGGTTCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCAATCCTACTGCAGGAAAGATAAAGAAGAGTATCCATGGGGTTCG  400

seq1  GTGCCCAGACAGTGGAGCCAATACATGGAGGACACCTGCCTCAAAAAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCAGACAGTGGAGCCAATACATGGAGGACACCTGCCTCAAAAAGTA  450

seq1  AGATGGGAAAGTTGTGAAAAGATACATGATATTGACCTTTGTCTTCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGAAAGTTGTGAAAAGATACATGATATTGACCTTTGTCTTCCACA  500

seq1  CACAAACATGCATAAGACTTAGGAGGACAAAGAAGGAGAAGTGGAACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACATGCATAAGACTTAGGAGGACAAAGAAGGAGAAGTGGAACACA  550

seq1  TTTCCTTATGATCTTAACCACTATCTCATGACTGAAGGGCTCACATGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTATGATCTTAACCACTATCTCATGACTGAAGGGCTCACATGAAC  600

seq1  TATAACGCTAAACCAATTAAATACACTGTATTTAGCATTGAAAGCAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACGCTAAACCAATTAAATACACTGTATTTAGCATTGAAAGCAGGAG  650

seq1  TCATCTCAGTCAATAAACCGTTTTAGAGTCAATCCATATTGTTTATAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCAGTCAATAAACCGTTTTAGAGTCAATCCATATTGTTTATAACT  700

seq1  ATCATTTTACATACCAAAAAATAATCAGAAAATAGATCAAGGCTTACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTACATACCAAAAAATAATCAGAAAATAGATCAAGGCTTACATA  750

seq1  GCATTTATTTAATAAATAATATAAATGTTAAACATAAATGTAGCAAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTATTTAATAAATAATATAAATGTTAAACATAAATGTAGCAAAAAT  800

seq1  TGTCAAGTCAACAAATTTCTAAAACCAGGAATCATAGATGATAAAGCAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGTCAACAAATTTCTAAAACCAGGAATCATAGATGATAAAGCAAG  850

seq1  CCCAGGACACCCTGTGATGTGACCCTCTGTGCAGACCTGGTAAATCTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGACACCCTGTGATGTGACCCTCTGTGCAGACCTGGTAAATCTGTG  900

seq1  TATGAAATTATGGATATAACTAGAGTTTGAGAAAGTGAACATTGTTCCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAATTATGGATATAACTAGAGTTTGAGAAAGTGAACATTGTTCCAA  950

seq1  AACCACAAGTGTCTGAGAACTGAAAAATTCTGAACCTGTGGTCCGTTCTT  1000
      ||||||||||||||||| |||| |||||||||||||||||||||||   |
seq2  AACCACAAGTGTCTGAG-ACTG-AAAATTCTGAACCTGTGGTCCGT--CT  996

seq1  CTCAGTGCGTTTTCTGTTGAAACCATCAGCAAACCGTGGGCAAGAGCCAT  1050
      ||||||||||||||||||| ||||||||||||||||||||| |||| |||
seq2  CTCAGTGCGTTTTCTGTTG-AACCATCAGCAAACCGTGGGC-AGAG-CAT  1043

seq1  AAAAGCTTTCGCAGAGTTTGCAAAATGGACAGGCTCCTAGTTTGCAAAAT  1100
      |||||| |||||||||||||| ||||||||| |||||||| |||||||  
seq2  AAAAGC-TTCGCAGAGTTTGC-AAATGGACA-GCTCCTAG-TTGCAAA--  1087

seq1  GGACAGGCT-CCTCTCTTGTAAGCCAATTATTTTTTTATTTTTCCAGAAT  1149
       |||||||| |||| ||||| |||  |    |||||||||||  | ||||
seq2  TGACAGGCTCCCTCCCTTGT-AGCATA----TTTTTTATTTT--CCGAAT  1130

seq1  GGGAGCCTAATGATAATTTTCCAGGGTAGAACTGACAAGTTTCCTGCAAA  1199
      ||||| |||  |||||||   ||  |||                      
seq2  GGGAG-CTATGGATAATT---CA--GTA----------------------  1152

seq1  GAAGAAACTAAAATAACTAAGGCATCATTAAGTCATACTCCCTATCGCCC  1249
                                                        
seq2  --------------------------------------------------  1152

seq1  GAATAGGTATACAACATTTTCTATTGAATGGTTTATAAAACAACCAGTGA  1299
                                                        
seq2  --------------------------------------------------  1152

seq1  AGTTAATATTAAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  1349
                                                        
seq2  --------------------------------------------------  1152

seq1  TGTGTATGTGTGTGCTTGAGCCTGCACATGTGTGCTAGAAAGAGAGTAAT  1399
                                                        
seq2  --------------------------------------------------  1152

seq1  TCAGTA  1405
            
seq2  ------  1152


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