BAC Information

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BAC

Clone NameB6Ng01-128I10
Chromosome10 (Build37)
Map Location 93,199,730 - 93,312,152
singlet/doubletdoublet
Overlap geneNtn4, LOC100041907, Usp44
Upstream geneGm872, 4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854, Lta4h, Hal, Amdhd1, Ccdc38, Snrpf, LOC100041873, LOC667338
Downstream geneMetap2, Vezt, Fgd6, Nr2c1, Ndufa12, EG215472, LOC100041955, Tmcc3, EG667315, 4921537D05Rik, Plxnc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128I10.bB6Ng01-128I10.g
ACCDH930353DH930354
length1,0961,007
definitionDH930353|Mus musculus domesticus DNA, BAC clone: B6Ng01-128I10, 5' end.DH930354|Mus musculus domesticus DNA, BAC clone: B6Ng01-128I10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,311,047 - 93,312,152)(93,199,730 - 93,200,733)
sequence
gaattcaacatggaagtcgggctttgagaagtttcctggagtgccccaga
agcctatcacatgacttgtagggagagagactctaggaaagagagatgag
gtgtaatggctcagcgggaggatgcaaggccccaaggagaagcaaaatgt
ttatagaacaaattgtattcatttcagggctggagagatggctcaggggt
taagagcactgactgcttttccagaggtcttgggttcaattcccagcaac
cacatggtggttcacaaccatctgtaatgagatttgatgccctcttctgg
tgtgtctgaagacagctacagtatacttatatacataaaataaacaattc
tttaaaaaatgttttttactcaagattcatttatttataaagtaaaaaaa
aatgacttagcctataaaaaatctaaaatgagaaaataactttttgaata
ttaagttatcattacctacccaaactactccgttttttagaaaattctat
gtacttctgtgtgggcgtgggcatgtgtgggatggtgtgctcttggaggc
caaaggcacgggcgcctcctggaacaggagttacagacattgtgagcagc
ctgccacggtgctgggaactgaacccgggtcctctgcaagaacagtagct
gctctgaaccactgagccacctgcccagctcccaaactactccatttgga
taaaggatttctaggactgtgtcacagggaaaactactaatttatcatga
tataacgaaacattggaaatagtcccaaatctacaacagagatatgatta
aatacattatggtagaaataaaacagatacagaaatgtttggaaaagaag
gattaaaaactttttttaagatttattttttttaagtgtgttgcatttgt
gtggtggatgtaagtgcagacgcctgtaaagagcagtggtgtcggatacc
ccttgtggctggagtagaggcagtagtgagccacggtgttgggtgctgga
ctcaacttccagtctttcaagagcagaacacttaacatctctctagccag
tgggctcaatgtttggtcaggtcctttgagggtcgacgctcttctt
gaattctgacttcccgaatgacaaacctggctttaactagtaccagaaaa
ctgtgagcaatattcatctttcaaaatgtttcagccacctactgtaactc
aacaggctttttcgatttccagatttcttaaaccctgacaaatgcaaaat
cttgttctctgagattggctctcatgatctgtccaggctgggcgtgaact
cctgggaaacagtcccctgggctcagctttctgagtaactgagacaacaa
caaaaactcccccagagaaaccagcttggccaatgcatgttaatgcttga
actcttaagcatgtgaagaaagggggttgtcaggcagccaaagacagacc
ttcacatgacagacttgtgtgtgcccccaaaaggtctaacaaaagagctt
tgtagtaaggaatggtgtgcaccattcactcgtagttccgttaggtttta
tggttgtgtggcagcaagcacacgccctgcttcagtgcagctttcaaagg
ctgtgggccattcacctaccaccacttcgaatgagtccaccgatatgttt
caatgataagcgaatcacaatggtatgctgtaagcacctttaacttctct
ttctcaccatttaattctactagggatcttacacttgcaaatcttaggct
cttttcttcatgtgttgctatagctgatgtgccactctctctggattggc
ccagattctgcccagatgttcactccatcctccttatcctagaccaccat
cattttgggcctgaccagatcattttccctctttcctgatacttcttggt
tagtgccagtcaatctttgctataggaagcttccctttctcactcaccct
aaaggcctattccaatatccttctctgtcttctggaaacgtgtcggaggt
agggttttattgctgtgagagacactgtgaccaaggcaactcttagaggg
aaaacatgtaattggggctggcttaattgtttccaaagttcagtacgtta
tcacagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_93311047_93312152
seq2: B6Ng01-128I10.b_45_1140 (reverse)

seq1  AAGAAGAGCTGTTCGACCCTCAAAGGGCCTTGACCCAAACATTGAGCTCC  50
      |||||||||   |||||||||||||| || ||| ||||||||||||| ||
seq2  AAGAAGAGC--GTCGACCCTCAAAGGACC-TGA-CCAAACATTGAGC-CC  45

seq1  ACTGGGCTAGAGAGATGGTTAAGTGGTTACTGCTCTTGCAGAGGACTGGA  100
      ||| |||||||||||| ||||||||  | |||||||||   | |||||||
seq2  ACT-GGCTAGAGAGAT-GTTAAGTG--TTCTGCTCTTG--AAAGACTGGA  89

seq1  GTTTGGGTCCCAGCACCC-ACACCGGTGGCTCACTACTGCCTCTACTCCA  149
        ||| || ||||||||| ||||| |||||||||||||||||||||||||
seq2  AGTTGAGT-CCAGCACCCAACACC-GTGGCTCACTACTGCCTCTACTCCA  137

seq1  GCCAC-AGGGGTATCCGACACCACTGCTCTTTACAGGCGTCTGCACTTAC  198
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAAGGGGTATCCGACACCACTGCTCTTTACAGGCGTCTGCACTTAC  187

seq1  ATCCACCACACAAATGC-ACACACTT-AAAAAAATAAATCTTAAAAAAAT  246
      ||||||||||||||||| |||||||| |||||||||||||||||||||| 
seq2  ATCCACCACACAAATGCAACACACTTAAAAAAAATAAATCTTAAAAAAA-  236

seq1  GTTTTTAATCCTTCTTTTCCAAACATTTCTGTATCTGTTTTATTTCTACC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAATCCTTCTTTTCCAAACATTTCTGTATCTGTTTTATTTCTACC  286

seq1  ATAATGTATTTAATCATATCTCTGTTGTAGATTTGGGACTATTTCCAATG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTATTTAATCATATCTCTGTTGTAGATTTGGGACTATTTCCAATG  336

seq1  TTTCGTTATATCATGATAAATTAGTAGTTTTCCCTGTGACACAGTCCTAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTTATATCATGATAAATTAGTAGTTTTCCCTGTGACACAGTCCTAG  386

seq1  AAATCCTTTATCCAAATGGAGTAGTTTGGGAGCTGGGCAGGTGGCTCAGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTTTATCCAAATGGAGTAGTTTGGGAGCTGGGCAGGTGGCTCAGT  436

seq1  GGTTCAGAGCAGCTACTGTTCTTGCAGAGGACCCGGGTTCAGTTCCCAGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAGAGCAGCTACTGTTCTTGCAGAGGACCCGGGTTCAGTTCCCAGC  486

seq1  ACCGTGGCAGGCTGCTCACAATGTCTGTAACTCCTGTTCCAGGAGGCGCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTGGCAGGCTGCTCACAATGTCTGTAACTCCTGTTCCAGGAGGCGCC  536

seq1  CGTGCCTTTGGCCTCCAAGAGCACACCATCCCACACATGCCCACGCCCAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCCTTTGGCCTCCAAGAGCACACCATCCCACACATGCCCACGCCCAC  586

seq1  ACAGAAGTACATAGAATTTTCTAAAAAACGGAGTAGTTTGGGTAGGTAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGTACATAGAATTTTCTAAAAAACGGAGTAGTTTGGGTAGGTAAT  636

seq1  GATAACTTAATATTCAAAAAGTTATTTTCTCATTTTAGATTTTTTATAGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACTTAATATTCAAAAAGTTATTTTCTCATTTTAGATTTTTTATAGG  686

seq1  CTAAGTCATTTTTTTTTACTTTATAAATAAATGAATCTTGAGTAAAAAAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTCATTTTTTTTTACTTTATAAATAAATGAATCTTGAGTAAAAAAC  736

seq1  ATTTTTTAAAGAATTGTTTATTTTATGTATATAAGTATACTGTAGCTGTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAAAGAATTGTTTATTTTATGTATATAAGTATACTGTAGCTGTC  786

seq1  TTCAGACACACCAGAAGAGGGCATCAAATCTCATTACAGATGGTTGTGAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACACACCAGAAGAGGGCATCAAATCTCATTACAGATGGTTGTGAA  836

seq1  CCACCATGTGGTTGCTGGGAATTGAACCCAAGACCTCTGGAAAAGCAGTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATGTGGTTGCTGGGAATTGAACCCAAGACCTCTGGAAAAGCAGTC  886

seq1  AGTGCTCTTAACCCCTGAGCCATCTCTCCAGCCCTGAAATGAATACAATT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTCTTAACCCCTGAGCCATCTCTCCAGCCCTGAAATGAATACAATT  936

seq1  TGTTCTATAAACATTTTGCTTCTCCTTGGGGCCTTGCATCCTCCCGCTGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATAAACATTTTGCTTCTCCTTGGGGCCTTGCATCCTCCCGCTGA  986

seq1  GCCATTACACCTCATCTCTCTTTCCTAGAGTCTCTCTCCCTACAAGTCAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTACACCTCATCTCTCTTTCCTAGAGTCTCTCTCCCTACAAGTCAT  1036

seq1  GTGATAGGCTTCTGGGGCACTCCAGGAAACTTCTCAAAGCCCGACTTCCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAGGCTTCTGGGGCACTCCAGGAAACTTCTCAAAGCCCGACTTCCA  1086

seq1  TGTTGAATTC  1106
      ||||||||||
seq2  TGTTGAATTC  1096

seq1: chr10_93199730_93200733
seq2: B6Ng01-128I10.g_70_1076

seq1  GAATTCTGACTTCCCGAATGACAAACCTGGCTTTAACTAGTACCAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACTTCCCGAATGACAAACCTGGCTTTAACTAGTACCAGAAAA  50

seq1  CTGTGAGCAATATTCATCTTTCAAAATGTTTCAGCCACCTACTGTAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGCAATATTCATCTTTCAAAATGTTTCAGCCACCTACTGTAACTC  100

seq1  AACAGGCTTTTTCGATTTCCAGATTTCTTAAACCCTGACAAATGCAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCTTTTTCGATTTCCAGATTTCTTAAACCCTGACAAATGCAAAAT  150

seq1  CTTGTTCTCTGAGATTGGCTCTCATGATCTGTCCAGGCTGGGCGTGAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCTCTGAGATTGGCTCTCATGATCTGTCCAGGCTGGGCGTGAACT  200

seq1  CCTGGGAAACAGTCCCCTGGGCTCAGCTTTCTGAGTAACTGAGACAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAAACAGTCCCCTGGGCTCAGCTTTCTGAGTAACTGAGACAACAA  250

seq1  CAAAAACTCCCCCAGAGAAACCAGCTTGGCCAATGCATGTTAATGCTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACTCCCCCAGAGAAACCAGCTTGGCCAATGCATGTTAATGCTTGA  300

seq1  ACTCTTAAGCATGTGAAGAAAGGGGGTTGTCAGGCAGCCAAAGACAGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAAGCATGTGAAGAAAGGGGGTTGTCAGGCAGCCAAAGACAGACC  350

seq1  TTCACATGACAGACTTGTGTGTGCCCCCAAAAGGTCTAACAAAAGAGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATGACAGACTTGTGTGTGCCCCCAAAAGGTCTAACAAAAGAGCTT  400

seq1  TGTAGTAAGGAATGGTGTGCACCATTCACTCGTAGTTCCGTTAGGTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTAAGGAATGGTGTGCACCATTCACTCGTAGTTCCGTTAGGTTTTA  450

seq1  TGGTTGTGTGGCAGCAAGCACACGCCCTGCTTCAGTGCAGCTTTCAAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGTGGCAGCAAGCACACGCCCTGCTTCAGTGCAGCTTTCAAAGG  500

seq1  CTGTGGGCCATTCACCTACCACCACTTCGAATGAGTCCACCGATATGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGCCATTCACCTACCACCACTTCGAATGAGTCCACCGATATGTTT  550

seq1  CAATGATAAGCGAATCACAATGGTATGCTGTAAGCACCTTTAACTTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATAAGCGAATCACAATGGTATGCTGTAAGCACCTTTAACTTCTCT  600

seq1  TTCTCACCATTTAATTCTACTAGGGATCTTACACTTGCAAATCTTAGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACCATTTAATTCTACTAGGGATCTTACACTTGCAAATCTTAGGCT  650

seq1  CTTTTCTTCATGTGTTGCTATAGCTGATGTGCCACTCTCTCTGGATTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTCATGTGTTGCTATAGCTGATGTGCCACTCTCTCTGGATTGGC  700

seq1  CCAGATTCTGCCCAGATGTTCACTCCATCCTCCTTATCCTAGACCACCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTCTGCCCAGATGTTCACTCCATCCTCCTTATCCTAGACCACCAT  750

seq1  CATTTT-GGCCTGACCAGATCCATTTTCCCTCTTTCCTGATACTTCTTGG  799
      |||||| ||||||||||||| |||||||||||||||||||||||||||||
seq2  CATTTTGGGCCTGACCAGAT-CATTTTCCCTCTTTCCTGATACTTCTTGG  799

seq1  TTAGTGCCAGTCAATC-TTGCTATAGGAAGCTTCCCTTTCTCACTCACCC  848
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTAGTGCCAGTCAATCTTTGCTATAGGAAGCTTCCCTTTCTCACTCACCC  849

seq1  TAAAGGCC-AATCCAATATCC-TCTCTGTC-TCTGGAAACGTGTCGTAGG  895
      |||||||| | |||||||||| |||||||| ||||||||||||||| |||
seq2  TAAAGGCCTATTCCAATATCCTTCTCTGTCTTCTGGAAACGTGTCGGAGG  899

seq1  TAGGGTTTTATTGCTGTGAAGAGACACTGTGACCAAGGCAACTCTTAGAG  945
      |||||||||||||||||| |||||||||||||||||||||||||||||| 
seq2  TAGGGTTTTATTGCTGTG-AGAGACACTGTGACCAAGGCAACTCTTAGA-  947

seq1  GGGAAAACATGTAATTGGGGCTGGCTT-ATAGTTTCAGAGGTTCAGTACG  994
      ||||||||||||||||||||||||||| || |||||  | ||||||||||
seq2  GGGAAAACATGTAATTGGGGCTGGCTTAATTGTTTCCAAAGTTCAGTACG  997

seq1  TTATCACAGT  1004
      ||||||||||
seq2  TTATCACAGT  1007