BAC Information

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BAC

Clone NameB6Ng01-129D12
Chromosome10 (Build37)16 (Build37)
Map Location 101,455,926 - 101,456,29647,040,636 - 47,041,626
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream geneMgat4c, LOC667652, Nts, Pamci, LOC382413
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129D12.bB6Ng01-129D12.g
ACCDH930863DH930864
length1,072978
definitionDH930863|Mus musculus domesticus DNA, BAC clone: B6Ng01-129D12, 5' end.DH930864|Mus musculus domesticus DNA, BAC clone: B6Ng01-129D12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(101,455,926 - 101,456,296)(47,040,636 - 47,041,626)
sequence
gaattcacttatataagatgcattttatatattaagacactcaaattgat
acattgctttctatacatacatatattaatctattaccataaccaatcaa
ggtagtaaacatatttctcaccactgaaaactgctgcttttgaaaattat
ctatttttttcctcaataccatgtctacccaaggcaataaaactatcagt
gcaatttagtttgtatttactagaatttcatgtaattggaataataaaat
ttccaagtctggattctttaagtcagtataattcagatttattttcaaaa
tggatgcatcaaagattttgctttaaccaatgactggtatctcatagtct
atccactcacatggtactagcacttggattgttcccaatattttgctata
attttataaaagttatttataatacttgtatccatgatagtttatggata
aatgctttagtgtcttttgcatcaatctctaggtgaagtgagttctatgg
tgggtacatgattgccttagcaagaaagtaatcattttccaaagtttgtt
tcattttgcaccattagtttgtgaaattaccattcctcttcaagctcacc
aatgctttcaaagttcagatatcctattattaacaagtatgaaatgattc
ccacatatcactttaattcttgtccctgtatggctaatgacttcttttta
tgtgtatccaaattattatttttttagttattttcttcatttatatttcc
aatgctatcccgaaagtcccccatactctcacccccactcccctacctac
ccactcccacttcttggccctggcattcccctgtactgaggcatataaag
tttgcaagaccaatgggcctctctttccaatggtgtccgactaggccatc
ttctgatacatatgcagctagagacacaggctctggggttactgattagt
tcatattgttgttccacctataggttacagacccttttactccttgggta
ctttctctagttcctccatggggccctgtgatccatccatagctgactgt
gagcatccacttctgtgtttgc
gaattcaatagaaaagacttccagtggtaggtcttgacattaaccaagtc
acaaaatattttaggtacaatttgtcctgcctagaagatgagttggggta
aaggtctcagataaattgtgggagtggctaaccaatgtctgaaaaggaca
gtgtccaaatgaaagaaacagagaaaactatgccatttggattagggatg
gaggtcagccacatagtagagtaacagcctagcacaaattgagagaagac
aggcttcagagcattagtatggaaacataaaatatcgaaagaaaatgtat
gcatggctctgacctgtatccaaaagaaagataaagaagaaaaggaaggt
gcaccttccaagtgcagagccctgcactggaccggatctcacacagccca
cagcccagttgcagctcgacctccccaggtattctgacacacccagcttc
agatgtgagaccttaaacccagccctgagacccagaaaaccaggatcctt
gtgaatctgtgaagcagagtctctgcccagccagagacctaagctccttc
tggttcccacctatgtgggctgggagcagagccctggctatgcaccccat
cccacacagcccatagcccagttgcagctcaactccagaggatcagaggg
tcacgagaaggacaggctacagtaagagacagggaggccagataacacca
gagataaccagatggcaagcataagaacataagcaacaaaaattgatatg
aattggcaacatcaaacatacctcaacataccctttaaacaagatccaga
tctaaactttcatttcatgaagatgatagaagactttaaaaaggacataa
ataactcttcaagaaatgcaggagaacacaagcacacagtagaagcgctt
aagaggaatgcataaatcccataaagaatacaggagaatacataacagtg
aagagctgacaaactgtccgtatctaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_101455926_101456296
seq2: B6Ng01-129D12.b_762_1119 (reverse)

seq1  GCAAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATGGAACACAGGG  50
      ||||||||||||||||||||||||||||||||| |||||||| |||||||
seq2  GCAAACACAGAAGTGGATGCTCACAGTCAGCTA-TGGATGGATCACAGGG  49

seq1  CCCCCAATAGAGGAGCTAGAGAAAGTATCCAAGGAGCTTGGGGGATTGGC  100
      ||||  || ||||| |||||||||||| ||||||||     |||  ||  
seq2  CCCC--ATGGAGGAACTAGAGAAAGTACCCAAGGAGTAAAAGGGTCTG--  95

seq1  AACCCTATAGGTGGAACAACATTATGAACTAACCAGTACTCCCGGAGCTC  150
       | |||||||||||||||||| |||||||||| |||||  ||| ||||  
seq2  TAACCTATAGGTGGAACAACAATATGAACTAATCAGTAACCCCAGAGCCT  145

seq1  CTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCTATCATTG  200
       ||||||||||||||||||||||||||||||||||||| ||  | |||||
seq2  GTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCGGACACCATTG  195

seq1  AGAAGAGAGGCCACTTGGTTTTGCAAACTTTATATGCCTCAGTACAGGGG  250
        ||||||||||  ||||| ||||||||||||||||||||||||||||||
seq2  GAAAGAGAGGCCCATTGGTCTTGCAAACTTTATATGCCTCAGTACAGGGG  245

seq1  AACGCCAGGGCCAAGAAGTGTGAGTGGGTGGGTAGGGGAGTGGGGGTGAG  300
      || ||||||||||||||||| |||||||| ||||||||||||||||||||
seq2  AATGCCAGGGCCAAGAAGTGGGAGTGGGTAGGTAGGGGAGTGGGGGTGAG  295

seq1  AGGGTATGGGGGACTTTTGGGATAGCATTTGAAATGTAAATGAAGAAAAT  350
      |  |||||||||||||| ||||||||||| ||||| ||||||||||||||
seq2  A--GTATGGGGGACTTTCGGGATAGCATTGGAAATATAAATGAAGAAAAT  343

seq1  ATGTAATTTAAAAAAAGTAAT  371
      |  |      |||||| ||||
seq2  AACT------AAAAAAATAAT  358

seq1: chr16_47040636_47041626
seq2: B6Ng01-129D12.g_69_1046

seq1  GAATTCAATAGAAAAGACTTCCAGTGGTAGGTCTTGACATTAACCAAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAGAAAAGACTTCCAGTGGTAGGTCTTGACATTAACCAAGTC  50

seq1  ACAAAATATTTTAGGTACAATTTGTCCTGCCTAGAAGATGAGTTGGGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATATTTTAGGTACAATTTGTCCTGCCTAGAAGATGAGTTGGGGTA  100

seq1  AAGGTCTCAGATAAATTGTGGGAGTGGCTAACCAATGTCTGAAAAGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTCAGATAAATTGTGGGAGTGGCTAACCAATGTCTGAAAAGGACA  150

seq1  GTGTCCAAATGAAAGAAACAGAGAAAACTATGCCATTTGGATTAGGGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCAAATGAAAGAAACAGAGAAAACTATGCCATTTGGATTAGGGATG  200

seq1  GAGGTCAGCCACATAGTAGAGTAACAGCCTAGCACAAATTGAGAGAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAGCCACATAGTAGAGTAACAGCCTAGCACAAATTGAGAGAAGAC  250

seq1  AGGCTTCAGAGCATTAGTATGGAAACATAAAATATCGAAAGAAAATGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCAGAGCATTAGTATGGAAACATAAAATATCGAAAGAAAATGTAT  300

seq1  GCATGGCTCTGACCTGTATCCAAAAGAAAGATAAAGAAGAAAAGGAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGCTCTGACCTGTATCCAAAAGAAAGATAAAGAAGAAAAGGAAGGT  350

seq1  GCACCTTCCAAGTGCAGAGCCCTGCACTGGACCGGATCTCACACAGCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTTCCAAGTGCAGAGCCCTGCACTGGACCGGATCTCACACAGCCCA  400

seq1  CAGCCCAGTTGCAGCTCGACCTCCCCAGGTATTCTGACACACCCAGCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCAGTTGCAGCTCGACCTCCCCAGGTATTCTGACACACCCAGCTTC  450

seq1  AGATGTGAGACCTTAAACCCAGCCCTGAGACCCAGAAAACCAGGATCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGAGACCTTAAACCCAGCCCTGAGACCCAGAAAACCAGGATCCTT  500

seq1  GTGAATCTGTGAAGCAGAGTCTCTGCCCAGCCAGAGACCTAAGCTCCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATCTGTGAAGCAGAGTCTCTGCCCAGCCAGAGACCTAAGCTCCTTC  550

seq1  TGGTTCCCACCTATGTGGGCTGGGAGCAGAGCCCTGGCTATGCACCCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCCACCTATGTGGGCTGGGAGCAGAGCCCTGGCTATGCACCCCAT  600

seq1  CCCACACAGCCCATAGCCCAGTTGCAGCTCAACTCCAGAGGATCAGAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACAGCCCATAGCCCAGTTGCAGCTCAACTCCAGAGGATCAGAGGG  650

seq1  TCACGAGAAGGACAGGCTACAGTAAGAGACAGGGAGGCCAGATAACACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGAGAAGGACAGGCTACAGTAAGAGACAGGGAGGCCAGATAACACCA  700

seq1  GAGATAACCAGATGGCAAGCATAAGAACATAAGCAACAAAAATTGATATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAACCAGATGGCAAGCATAAGAACATAAGCAACAAAAATTGATATG  750

seq1  AATTGGCAACATCAAACATACCTCAACATACCCTTTAAACAAGATCCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGCAACATCAAACATACCTCAACATACCCTTTAAACAAGATCCAGA  800

seq1  TCTAAACTTTCATTTCATGAAGATGATAGAAGACTTTAAAAAGGACATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACTTTCATTTCATGAAGATGATAGAAGACTTTAAAAAGGACATAA  850

seq1  ATAACTCTTTTAAAGAAATGCAGGAGAACACAAGCACACAAGTAGAAGCG  900
      |||||||  || ||||||||||||||||||||||||||| ||||||||||
seq2  ATAACTC--TTCAAGAAATGCAGGAGAACACAAGCACAC-AGTAGAAGCG  897

seq1  CTTAAAGAGGAATGCATAAATCCCATAAAGAAATACAGGAGAATACAATT  950
      ||| |||||||||||||||||||||||||| ||||||||||||||||   
seq2  CTT-AAGAGGAATGCATAAATCCCATAAAG-AATACAGGAGAATACA---  942

seq1  AAACAGGTGAAGAAGCTGAACAAAACTGTCCAGTATCTAAA  991
       |||| |||||| ||||||   ||||||||| |||||||||
seq2  TAACA-GTGAAG-AGCTGA--CAAACTGTCC-GTATCTAAA  978