BAC Information

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BAC

Clone NameB6Ng01-130F01
Chromosome10 (Build37)
Map Location 59,235,429 - 59,383,302
singlet/doubletdoublet
Overlap geneCbara1, EG664907, LOC664936, Dnajb12
Upstream geneLOC100039099, Sh3md4, Sept10, Ankrd57, LOC664892, P4ha1, LOC100039174, Pla2g12b, Oit3, Ccdc109a, LOC100039225
Downstream geneDdit4, D10Ertd641e, Ascc1, Spock2, Chst3, LOC100039080, Psap, Cdh23, 4632428N05Rik, Slc29a3, Unc5b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130F01.bB6Ng01-130F01.g
ACCDH931663DH931664
length800491
definitionDH931663|Mus musculus domesticus DNA, BAC clone: B6Ng01-130F01, 5' end.DH931664|Mus musculus domesticus DNA, BAC clone: B6Ng01-130F01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,382,507 - 59,383,302)(59,235,429 - 59,235,921)
sequence
gaattctgtccgcagccgcaggggcttgtggggggaaagcagaggcacag
tttgagcattggccacttcctgtcccccttctcttggcctctgtgagccc
aagtctatgctttcattctatctgctggagacctgatttttgaattgggg
gctaccccactcatcattgccacatctgggggcctcactcaagctgtcct
acctgccacggggaccatctcctgctcctgacttctcctctgtctgtctc
agccctcaggccccttcctggcagtagccactttgttgctgttgtagaaa
ttatgttgcctgcttgctttgttgttattgtttttattaattagagtctc
agaaactgcacgccttaaatcccagcactcaggagacagaggcaggtaga
tctctgtgagttcgaagccagcctggtctacagagagcaagttccaaaga
cagccagggctgcacaaagaaactctgacctgaaaaaaaaaaaaaaaacc
gacaaaaagccagcgtctcttgtatcccagacaggctagaactcactaag
gaaccaaggatgcccttgaacgtctgatcctcccacttgtactgcctgag
tgtcctgacagggtgtgtaccaccacacccagattatgaggtgccaaaga
tcgaacacagggctccttttctagatgtgtaccacgaaccacactcctta
acccggctagcaactttcttgttttgttttgctttttttttaaaaaccgt
ggctccactcttgcaggagggaggggaacccgaatgtgcagagaggcctg

ttctggaaggatgtctgacttatgacagtctcatgtggactttggtgtca
tgccctgtctctcttctgttaccctaggcagactgaaagttagccctctc
tgagtcatgaataacccttcaccctcagtgccacccctgtcctctaaggt
tctgtgggagcttagttctcagcagttaccatgtttcagggccttctctc
atggcctgtaagccctggactggaacccagtgtctatacctgcctgcaca
cctagctacacgtctgtcggtatgccttaaacatgtagcttacaatgttg
tggatgctcaggcttcatcgttggctccttccttgtttctgaaacaagtt
tttaaggggccattgcaagctgggtatggaggcacatgcctataacccca
gcattttgggagtctgaggcaggaggatggcggcaaggtttgagatcagc
caggatatatagtgaatttcaaggccagcttgggaacacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_59382507_59383302
seq2: B6Ng01-130F01.b_45_844 (reverse)

seq1  CAGGCCTCTCTGCACATTC-GGTTCCCCTCCCTCCTGCAAGAGTGGAGCC  49
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAGGCCTCTCTGCACATTCGGGTTCCCCTCCCTCCTGCAAGAGTGGAGCC  50

seq1  ACGG-TTTTAAAAAAAAAGCAAAACAAAACAAGAAAGTTGCTAGCCGGGT  98
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTTTTTAAAAAAAAAGCAAAACAAAACAAGAAAGTTGCTAGCCGGGT  100

seq1  T-AGGAGTGTGGTTCGTGGTACACATCTAG-AAAGGAGCCCTGTGTTCGA  146
      | |||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAAGGAGTGTGGTTCGTGGTACACATCTAGAAAAGGAGCCCTGTGTTCGA  150

seq1  TCTTTGGCACCTCATAATCTGGGTGTGGTGGTACACACCCTGTCAGGACA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGCACCTCATAATCTGGGTGTGGTGGTACACACCCTGTCAGGACA  200

seq1  CTCAGGCAGTACAAGTGGGAGGATCAGACGTTCAAGGGCATCCTTGGTTC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCAGTACAAGTGGGAGGATCAGACGTTCAAGGGCATCCTTGGTTC  250

seq1  CTTAGTGAGTTCTAGCCTGTCTGGGATACAAGAGACGCTGGCTTTTTGTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTGAGTTCTAGCCTGTCTGGGATACAAGAGACGCTGGCTTTTTGTC  300

seq1  GGTTTTTTTTTTTTTTTTCAGGTCAGAGTTTCTTTGTGCAGCCCTGGCTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTTTTTTTTTTCAGGTCAGAGTTTCTTTGTGCAGCCCTGGCTG  350

seq1  TCTTTGGAACTTGCTCTCTGTAGACCAGGCTGGCTTCGAACTCACAGAGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGAACTTGCTCTCTGTAGACCAGGCTGGCTTCGAACTCACAGAGA  400

seq1  TCTACCTGCCTCTGTCTCCTGAGTGCTGGGATTTAAGGCGTGCAGTTTCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTGCCTCTGTCTCCTGAGTGCTGGGATTTAAGGCGTGCAGTTTCT  450

seq1  GAGACTCTAATTAATAAAAACAATAACAACAAAGCAAGCAGGCAACATAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCTAATTAATAAAAACAATAACAACAAAGCAAGCAGGCAACATAA  500

seq1  TTTCTACAACAGCAACAAAGTGGCTACTGCCAGGAAGGGGCCTGAGGGCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACAACAGCAACAAAGTGGCTACTGCCAGGAAGGGGCCTGAGGGCT  550

seq1  GAGACAGACAGAGGAGAAGTCAGGAGCAGGAGATGGTCCCCGTGGCAGGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGACAGAGGAGAAGTCAGGAGCAGGAGATGGTCCCCGTGGCAGGT  600

seq1  AGGACAGCTTGAGTGAGGCCCCCAGATGTGGCAATGATGAGTGGGGTAGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGCTTGAGTGAGGCCCCCAGATGTGGCAATGATGAGTGGGGTAGC  650

seq1  CCCCAATTCAAAAATCAGGTCTCCAGCAGATAGAATGAAAGCATAGACTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAATTCAAAAATCAGGTCTCCAGCAGATAGAATGAAAGCATAGACTT  700

seq1  GGGCTCACAGAGGCCAAGAGAAGGGGGACAGGAAGTGGCCAATGCTCAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCACAGAGGCCAAGAGAAGGGGGACAGGAAGTGGCCAATGCTCAAA  750

seq1  CTGTGCCTCTGCTTTCCCCCCACAAGCCCCTGCGGCTGCGGACAGAATTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCTCTGCTTTCCCCCCACAAGCCCCTGCGGCTGCGGACAGAATTC  800

seq1: chr10_59235429_59235921
seq2: B6Ng01-130F01.g_69_565

seq1  GAATTCTTCTGGAAGGATGTCTGACTTATGACAGTCTCATGTGGACTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGGAAGGATGTCTGACTTATGACAGTCTCATGTGGACTTTG  50

seq1  GTGTCATGCCCTGTCTCTCTTCTGTTACCCTAGGCAGACTGAAAGTTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATGCCCTGTCTCTCTTCTGTTACCCTAGGCAGACTGAAAGTTAGC  100

seq1  CCTCTCTGAGTCATGAATAACCCTTCACCCTCAGTGCCACCCCTGTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTGAGTCATGAATAACCCTTCACCCTCAGTGCCACCCCTGTCCTC  150

seq1  TAAGGTTCTGTGGGAGCTTAGTTCTCAGCAGTTACCATGTTTCAGGGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTCTGTGGGAGCTTAGTTCTCAGCAGTTACCATGTTTCAGGGCCT  200

seq1  TCTCTCATGGCCTGTAAGCCCTGGACTGGAACCCAGTGTCTATACCTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCATGGCCTGTAAGCCCTGGACTGGAACCCAGTGTCTATACCTGCC  250

seq1  TGCACACCTAGCTACACGTCTGTCGGTATGCCTTAAACATGTAGCTTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACCTAGCTACACGTCTGTCGGTATGCCTTAAACATGTAGCTTACA  300

seq1  ATGTTGTGGATGCTCAGGCTTCATCGTTGGCTCCTTCCTTGTTTCTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTGGATGCTCAGGCTTCATCGTTGGCTCCTTCCTTGTTTCTGAAA  350

seq1  CAAGTTTTTAAGGGGCCATTGCAAGCTGGGTATGGAGGCACATGCCTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTTTAAGGGGCCATTGCAAGCTGGGTATGGAGGCACATGCCTATA  400

seq1  ACCCCAGCA-TTTGGGAGTCTGAGGCAGGAGGATGGCGGCAAGG-TTGAG  448
      ||||||||| |||||||||||||||||||||||||||||||||| |||||
seq2  ACCCCAGCATTTTGGGAGTCTGAGGCAGGAGGATGGCGGCAAGGTTTGAG  450

seq1  ATCAGCCAGGATATATAGTGAA-TTCAAGGCCAGCTT-GGAACACAT  493
      |||||||||||||||||||||| |||||||||||||| |||||||||
seq2  ATCAGCCAGGATATATAGTGAATTTCAAGGCCAGCTTGGGAACACAT  497