BAC Information

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BAC

Clone NameB6Ng01-130M15
Chromosome10 (Build37)
Map Location 104,170,986 - 104,344,233
singlet/doubletdoublet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573, BC067068, Ccdc59
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130M15.bB6Ng01-130M15.g
ACCDH932014DH932015
length998975
definitionDH932014|Mus musculus domesticus DNA, BAC clone: B6Ng01-130M15, 5' end.DH932015|Mus musculus domesticus DNA, BAC clone: B6Ng01-130M15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,170,986 - 104,171,986)(104,343,245 - 104,344,233)
sequence
gaattccagtttcaatacaattcaccaagttttcttaggagaatcagtaa
ggccatacctttttatataagtggaactttacctaatagcaacctctaaa
gcacagatttgataaatcatttagccattatttagactgtaatttacaaa
gtaagttgtaattttttcaaagccaccataatagttacaaaatttttcac
ccactgcacaaatacagttcatagccatatcatttacaaatatcacagct
ggataattcaattcaaagtataaggaaaataatctagtagattataatag
aaacaaatttcatttataagtttatttgttaagtaggagcatatattaaa
tataatatacctctaatttaaatcttcatgttgagcttaaagggcatgat
aacacatattaatacaataaaaatataaaataagaaagagttaatccttt
gaaatgagtaagaaagactaacaaatccttagttaaattaactcaaagac
acaaaatgtagttatttctaaccataatgaaaatgaatcaagaaatttgt
ggcgaaatgagtgtacttaaaatgtataatattaagcaatggggtccaag
ttgaaggaaaaaaaaaagaccagccagtttttctttaaatctaaacccta
tcctactaagcacatgtgtttatttataaagggctgtcactgtggattta
gtataacatttagaaacaagacccagaaagaacactaaggaagggtaagc
tgatgaggagaatggatacagaaaatgtgattcatttacacaatggaata
atattcagctattaagaacaaggacatcattggtattgcgggcaaatgga
cagaacaagaaatattatcctgaagaagtaactcagactccaaagaacat
tcatgatatgcactcacttataagtggatattagtcagccaaaaggtaca
gaatacccaggaaacatacaccagaactcaagaagttaacaagcctaa
gaattcttaaccagtagttgagcttgatgttcagtgagagaaattgtctt
aaaaatatgatttttaaccaatgcagttatgtatttatatattttggtaa
aggaatcttaccatgttgtcttggatagctttgatttgcctatgtagacc
aggttggctttgaactcacaaagatgcacttgcgtctgcctcccaaattc
tgggatcaagagcacaagtcagcacaattaagtaagtgtctatttcttcc
aagaacttttatgcttcctgtgatagattttaagacacatggatgtatac
catcgtcactatatacttagtctttccattgaataaagtcatatcttaat
tgccatttgcttcatgtttctagcaccactgactattgatatttgtttgc
tatctacatattttattctttgtcttctctattcatttcctggattcctt
tttattaaatggatatatctgtatgcttttcaagctgccttgtttctttt
actattttcttcttttactttgttctttttttcttaatgatccacagaac
acacttaatatttgtgtttaaaatggcttaacatggattaatataaaaat
aaacttttattagcctgaaattttcgtctctaaggcatactgtcttcaac
tgttaacttgggcctactcgtggaatcatctatccactgtacaatcttat
ctagggttagtatattttcagcctctgagacttactgtgataagatcatc
tgttacagttcttcctgaactctaagtcggtggttccactcagttgtctg
gctcacctcctctcagctaaccgactcaatctggcttcttttggcttctt
ctgtctcatactgactgtgcaatatgtctaatcttctggatcttctcatt
tgtggctcattctcgctatacctgtgtcagcttgttctcttttcaactgt
gttaggtaactttcaggtaaactgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104170986_104171986
seq2: B6Ng01-130M15.b_49_1046

seq1  GAATTCCAGTTTCAATACAATTCACCAAGTTTTCTTAGGAGAATCAGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTTCAATACAATTCACCAAGTTTTCTTAGGAGAATCAGTAA  50

seq1  GGCCATACCTTTTTATATAAGTGGAACTTTACCTAATAGCAACCTCTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATACCTTTTTATATAAGTGGAACTTTACCTAATAGCAACCTCTAAA  100

seq1  GCACAGATTTGATAAATCATTTAGCCATTATTTAGACTGTAATTTACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGATTTGATAAATCATTTAGCCATTATTTAGACTGTAATTTACAAA  150

seq1  GTAAGTTGTAATTTTTTCAAAGCCACCATAATAGTTACAAAATTTTTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTTGTAATTTTTTCAAAGCCACCATAATAGTTACAAAATTTTTCAC  200

seq1  CCACTGCACAAATACAGTTCATAGCCATATCATTTACAAATATCACAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCACAAATACAGTTCATAGCCATATCATTTACAAATATCACAGCT  250

seq1  GGATAATTCAATTCAAAGTATAAGGAAAATAATCTAGTAGATTATAATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATTCAATTCAAAGTATAAGGAAAATAATCTAGTAGATTATAATAG  300

seq1  AAACAAATTTCATTTATAAGTTTATTTGTTAAGTAGGAGCATATATTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATTTCATTTATAAGTTTATTTGTTAAGTAGGAGCATATATTAAA  350

seq1  TATAATATACCTCTAATTTAAATCTTCATGTTGAGCTTAAAGGGCATGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATACCTCTAATTTAAATCTTCATGTTGAGCTTAAAGGGCATGAT  400

seq1  AACACATATTAATACAATAAAAATATAAAATAAGAAAGAGTTAATCCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATATTAATACAATAAAAATATAAAATAAGAAAGAGTTAATCCTTT  450

seq1  GAAATGAGTAAGAAAGACTAACAAATCCTTAGTTAAATTAACTCAAAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAGTAAGAAAGACTAACAAATCCTTAGTTAAATTAACTCAAAGAC  500

seq1  ACAAAATGTAGTTATTTCTAACCATAATGAAAATGAATCAAGAAATTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATGTAGTTATTTCTAACCATAATGAAAATGAATCAAGAAATTTGT  550

seq1  GGCGAAATGAGTGTACTTAAAATGTATAATATTAAGCAATGGGGTCCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGAAATGAGTGTACTTAAAATGTATAATATTAAGCAATGGGGTCCAAG  600

seq1  TTGAAGGAAAAAAAAAAGACCAGCCAGTTTTTCTTTAAATCTAAACCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGAAAAAAAAAAGACCAGCCAGTTTTTCTTTAAATCTAAACCCTA  650

seq1  TCCTACTAAGCACATGTGTTTATTTATAAAGGGCTGTCACTGTGGATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTAAGCACATGTGTTTATTTATAAAGGGCTGTCACTGTGGATTTA  700

seq1  GTATAACATTTAGAAACAAGACCCAGAAAGAACACTAAGGAAGGGTAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAACATTTAGAAACAAGACCCAGAAAGAACACTAAGGAAGGGTAAGC  750

seq1  TGATGAGGAGAATGGATACAGAAAATGTGATTCATTTACACAATGGAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGGAGAATGGATACAGAAAATGTGATTCATTTACACAATGGAATA  800

seq1  ATATTCAGCTATTAAGAACAAGGACATCATTGGTATTGCGGGCAAATGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAGCTATTAAGAACAAGGACATCATTGGTATTGCGGGCAAATGGA  850

seq1  CAGAACAAGAAAATATTATCCTGAAGAAGGTAACTCAGACCCCAAAGAAC  900
      ||||||||| |||||||||||||||||| ||||||||||| |||||||||
seq2  CAGAACAAG-AAATATTATCCTGAAGAA-GTAACTCAGACTCCAAAGAAC  898

seq1  ATTCATGATATGCACTCACTTATAAGTGGATATTAGTCAGCCAAAAGGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGATATGCACTCACTTATAAGTGGATATTAGTCAGCCAAAAGGTA  948

seq1  CAGAATACCCAGGATACATTACA-CAGAACTCAAGAAGGTTAACAAGCCT  999
      |||||||||||||| ||| |||| ||||||||||||| ||||||||||||
seq2  CAGAATACCCAGGAAACA-TACACCAGAACTCAAGAA-GTTAACAAGCCT  996

seq1  AA  1001
      ||
seq2  AA  998

seq1: chr10_104343245_104344233
seq2: B6Ng01-130M15.g_70_1044 (reverse)

seq1  GCAGTTTTACCTGGAGAGTTTTACTTACACAGGTTGAAGAGAGAACAAGC  50
      |||| ||||||| || || ||  || ||||| |||||| |||||||||||
seq2  GCAG-TTTACCT-GAAAG-TTACCTAACACA-GTTGAAAAGAGAACAAGC  46

seq1  TGGACACAGGTATAGCGAGAATGAGCCACCAAATGAGAAGGATCCAGAAG  100
      | |||||||||||||||||||||||||| |||||||||| ||||||||||
seq2  T-GACACAGGTATAGCGAGAATGAGCCA-CAAATGAGAA-GATCCAGAAG  93

seq1  ATTAAGACATATTGCCACAGTCAGTATGAGACCAAGAAGAAGCCAAAAGA  150
      ||| |||||||||| |||||||||||||||||  ||||||||||||||||
seq2  ATT-AGACATATTG-CACAGTCAGTATGAGAC--AGAAGAAGCCAAAAGA  139

seq1  AGCCAGATTGAGTCGGTTAGCTTGGAGAGGAGGTGAGCCAGAACAACTGA  200
      ||||||||||||||||||||||  ||||||||||||||||| ||||||||
seq2  AGCCAGATTGAGTCGGTTAGCT--GAGAGGAGGTGAGCCAG-ACAACTGA  186

seq1  GTGGAACCACCGACCTAGAGTTCAGGAAGAACTGTAACAGATGATCTTAT  250
      |||||||||||||| |||||||||||||||||||||||||||||||||| 
seq2  GTGGAACCACCGACTTAGAGTTCAGGAAGAACTGTAACAGATGATCTTA-  235

seq1  TCACAGTAAGTCTCAGAGGCTGAAAATATACTAACCCTAGATAAGATTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTAAGTCTCAGAGGCTGAAAATATACTAACCCTAGATAAGATTGT  285

seq1  ACAGTGGATAGATGATTCCACGAGTAGGCCCAAGTTAACAGTTGAAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGATAGATGATTCCACGAGTAGGCCCAAGTTAACAGTTGAAGACA  335

seq1  GTATGCCTTAGAGACGAAAATTTCAGGCTAATAAAAG-TTATTTTTATAT  399
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTATGCCTTAGAGACGAAAATTTCAGGCTAATAAAAGTTTATTTTTATAT  385

seq1  TAATCCATGTTAAGCCATTTTAAACACAAATATTAAGTGTGTTCTGTGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCATGTTAAGCCATTTTAAACACAAATATTAAGTGTGTTCTGTGGA  435

seq1  TCATTAAGAAAAAAAGAACAAAGTAAAAGAAGAAAATAGTAAAAGAAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAGAAAAAAAGAACAAAGTAAAAGAAGAAAATAGTAAAAGAAACA  485

seq1  AGGCAGCTTGAAAAGCATACAGATATATCCATTTAATAAAAAGGAATCCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCTTGAAAAGCATACAGATATATCCATTTAATAAAAAGGAATCCA  535

seq1  GGAAATGAATAGAGAAGACAAAGAATAAAATATGTAGATAGCAAACAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGAATAGAGAAGACAAAGAATAAAATATGTAGATAGCAAACAAAT  585

seq1  ATCAATAGTCAGTGGTGCTAGAAACATGAAGCAAATGGCAATTAAGATAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAGTCAGTGGTGCTAGAAACATGAAGCAAATGGCAATTAAGATAT  635

seq1  GACTTTATTCAATGGAAAGACTAAGTATATAGTGACGATGGTATACATCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTATTCAATGGAAAGACTAAGTATATAGTGACGATGGTATACATCC  685

seq1  ATGTGTCTTAAAATCTATCACAGGAAGCATAAAAGTTCTTGGAAGAAATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCTTAAAATCTATCACAGGAAGCATAAAAGTTCTTGGAAGAAATA  735

seq1  GACACTTACTTAATTGTGCTGACTTGTGCTCTTGATCCCAGAATTTGGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTACTTAATTGTGCTGACTTGTGCTCTTGATCCCAGAATTTGGGA  785

seq1  GGCAGACGCAAGTGCATCTTTGTGAGTTCAAAGCCAACCTGGTCTACATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACGCAAGTGCATCTTTGTGAGTTCAAAGCCAACCTGGTCTACATA  835

seq1  GGCAAATCAAAGCTATCCAAGACAACATGGTAAGATTCCTTTACCAAAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATCAAAGCTATCCAAGACAACATGGTAAGATTCCTTTACCAAAAT  885

seq1  ATATAAATACATAACTGCATTGGTTAAAAATCATATTTTTAAGACAATTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATACATAACTGCATTGGTTAAAAATCATATTTTTAAGACAATTT  935

seq1  CTCTCACTGAACATCAAGCTCAACTACTGGTTAAGAATTC  989
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACTGAACATCAAGCTCAACTACTGGTTAAGAATTC  975