BAC Information

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BAC

Clone NameB6Ng01-130O07
Chromosome10 (Build37)
Map Location 32,844,082 - 32,845,283
singlet/doubletsinglet
Overlap geneTrdn
Upstream geneTcba1, EG667761
Downstream geneA330019N05Rik, LOC100040686, EG215895, LOC100041399, Sult3a1, Rshl3, 2700019D07Rik, LOC672399, LOC666127, Rwdd1, 4732454E20Rik, BB146404
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130O07.bB6Ng01-130O07.g
ACCDH932090DH932091
length1,2591,174
definitionDH932090|Mus musculus domesticus DNA, BAC clone: B6Ng01-130O07, 5' end.DH932091|Mus musculus domesticus DNA, BAC clone: B6Ng01-130O07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacactcttttccactttctcttctattagattcagtgtatctg
gctttatggtgaagtatttgatgcacttagatgtgagctttgttcaaggt
gacaaatatggatctattttcatttctctacatatagactcctagttaga
ccagcaccatttcctgaagatgcttttttttccccccattgtatattttt
ggatcaagtgtccataagtatatggtttttatttctgggtcttctattct
attatattgatcaacctgtatgtatctttaccaataccatgtagttttta
tcacgattgcactgtagtaaagcttgaggccaggaatggtgtttcctcca
gaaattattttattgttaagaattgtttttgctattataaggttttttgc
ttttccagatgaatttgaggattgttctttacacgtctttgaagaattgt
gttggaaatttgatgggattgtgttcaacctggagattgcctttggtagg
atggccatttttactgtgttaatcttgtcaatacttgagcatgggagatc
actccattttcttcagtttctttcttgaggaacataaagttattgtcata
cagatctttcaattctttggttagagttacccccaagatattttatatta
tttgtgcctattgtgaagggagttgtttccctaatttcttcctcagccca
tttatcattggtataaagggaggctactgatttatttgaggtaattttct
atccagtgactttaccgaagttctttaccggctgtagaagttccctcgta
gaagttttggggttgtctatgcataatatcatatcatctgcaaatactga
tacctttccttctttgctggtttgtattcccttgatctcttttccttatc
ttattgttattttatttttctagctagaactttgagtactatattaaata
gatattgggaaaatggtcatccttgtcttatcctgattttagtgggattg
cctcaagtatctctacatttaatttggtattggctatggtttgcagtaaa
tgcttttatatgttaagaatgtgaactgaattctggtctctccaaactta
cagacggtgttaatatttggcaaagccttttcaacttcaggtaatgatta
taaaatagacaactctcacgatttaatttcttccgggatcctgctggata
aatactactcggaacttaagaaccctaacctctgcacgtaactagaagac
attctctga
gaattccttccacgatttagtgctattcttcataataaacaggcattagg
tcccaaaggggttctttttttaaggtgtttattcagaacacagacatatt
tccctattttaattaaagaatgttatgaagattggttatgatctcagaat
gcctatcaaaatcttttcaatgatatgaagctgaattgtcatacaaaaaa
tattgtagaacacctcatgcctttacacagttttgaatattgtctacata
aagaataatagacagaagcaagccctgggtaattcaaatctcagctcttt
caggagacattgggtatagcctctgggaggaattcagtgtctgtttcaca
tattttcagggaatcgcttttcactgaacttaggtatgccatattttgct
aaaattgcctgggaaagtaagagctatcttctgggagttgtacctaggct
atataaatgactgtaagctctgtgcctgtatacacacacacacacacaca
cacacacacacacacacacgttgtctaacaccacaatgatttttttgtgt
tcttagttccatgttgcctttctgagaacactgcttgtatgtgactccat
aggaccagatgattataggaactcaaggtattagcctataaaaaacaaca
gtctctgaacaataagatctccaataggaaccaggaattacatatatgga
aatatggagaaaacatctaatatttagacatcagaaggcaatattcatag
tgtttggaaatgcttagaagcacaagaatgaatctgttttccagtttttg
ggttctccacttaagctctagaaagtaagattcttaattcagcacaattg
aagttatacaaggtattgtacttatggttcttcctaaaaattaaaggact
ataacaatccattaattatattgaatttagttactagttgaagtctattg
gaaagtttcagtatagaatattttttttaattttaaaaatggtgaattca
tttactcattcttgtctcgtactctctgtgagacaacagaacatttattt
atattaatgaacagccttgcaagatctgtgagacttaatgtattcaaatt
taaattaagaaacttaaatttcctagtgaattcatttaatacggttaatg
ttatattttccagcatgcagcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_32844082_32845283
seq2: B6Ng01-130O07.g_67_1240 (reverse)

seq1  TTTGCCTGCATGGCTAGGAAAATATAAAACATTTAACACCTAATTTTAAT  50
      |||| |||||| ||| ||||||||||| |   ||||| | ||   |||| 
seq2  TTTG-CTGCAT-GCT-GGAAAATATAACA---TTAAC-CGTA---TTAAA  40

seq1  TAAAATTACTATGAAAATTATAGTGTCTTTAATATTTAAATTTGATTACA  100
      | || | |||| |||| ||| ||| ||||    |||||||||||| ||||
seq2  TGAATTCACTAGGAAATTTA-AGTTTCTT---AATTTAAATTTGAATACA  86

seq1  TTAAGTCTCACAGATCTTTTGCAAAGGCTTGTTCATTAATATAAATAAAT  150
      ||||||||||||||||  |||| ||||| |||||||||||||||||||| 
seq2  TTAAGTCTCACAGATC--TTGC-AAGGC-TGTTCATTAATATAAATAAA-  131

seq1  TGTTCTGTGTGTCTCACAGAGAGTACGAGACAAGAATGAGTTAAATGAAT  200
      |||||||| ||||||||||||||||||||||||||||||| |||||||||
seq2  TGTTCTGT-TGTCTCACAGAGAGTACGAGACAAGAATGAG-TAAATGAAT  179

seq1  TCAACCCATTTTTTAAAATTAAAAAAATATTTCTATACTTGAAACTTTCC  250
      |||  ||| ||||||||||||||||||   |||||||| |||||||||||
seq2  TCA--CCA-TTTTTAAAATTAAAAAAAATATTCTATAC-TGAAACTTTCC  225

seq1  AATAGACTTCAACTAGTTAACTAAATTCAATATAATTAATGGATTGTTAT  300
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AATAGACTTCAACTAG-TAACTAAATTCAATATAATTAATGGATTGTTAT  274

seq1  AGTCCTTTTAAATTTTTAGGAAGAACCATAAGTACAATACCTTGTATAAC  350
      ||||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTT--AATTTTTAGGAAGAACCATAAGTACAATACCTTGTATAAC  322

seq1  TTCAATTGTGCTGAATTAAGAATCTTACTTTCTAGAGCTTAAGTGGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTGTGCTGAATTAAGAATCTTACTTTCTAGAGCTTAAGTGGAGAA  372

seq1  CCCAAAAACTGGAAAACAGATTCATTCTTGTGCTTCTAAGCATTTCCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAACTGGAAAACAGATTCATTCTTGTGCTTCTAAGCATTTCCAAA  422

seq1  CACTATGAATATTGCCTTCTGATGTCTAAATATTAGATGTTTTCTCCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGAATATTGCCTTCTGATGTCTAAATATTAGATGTTTTCTCCATA  472

seq1  TTTCCATATATGTAATTCCTGGTTCCTATTGGAGATCTTATTGTTCAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATATATGTAATTCCTGGTTCCTATTGGAGATCTTATTGTTCAGAG  522

seq1  ACTGTTGTTTTTTATAGGCTAATACCTTGAGTTCCTATAATCATCTGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGTTTTTTATAGGCTAATACCTTGAGTTCCTATAATCATCTGGTC  572

seq1  CTATGGAGTCACATACAAGCAGTGTTCTCAGAAAGGCAACATGGAACTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGAGTCACATACAAGCAGTGTTCTCAGAAAGGCAACATGGAACTAA  622

seq1  GAACACAAAAAAATCATTGTGGTGTTAGACAACGTGTGTGTGTGTGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACAAAAAAATCATTGTGGTGTTAGACAACGTGTGTGTGTGTGTGTG  672

seq1  TGTGTGTGTGTGTGTGTGTGTATACAGGCACAGAGCTTACAGTCATTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTATACAGGCACAGAGCTTACAGTCATTTAT  722

seq1  ATAGCCTAGGTACAACTCCCAGAAGATAGCTCTTACTTTCCCAGGCAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTAGGTACAACTCCCAGAAGATAGCTCTTACTTTCCCAGGCAATT  772

seq1  TTAGCAAAATATGGCATACCTAAGTTCAGTGAAAAGCGATTCCCTGAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAAAATATGGCATACCTAAGTTCAGTGAAAAGCGATTCCCTGAAAA  822

seq1  TATGTGAAACAGACACTGAATTCCTCCCAGAGGCTATACCCAATGTCTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGAAACAGACACTGAATTCCTCCCAGAGGCTATACCCAATGTCTCC  872

seq1  TGAAAGAGCTGAGATTTGAATTACCCAGGGCTTGCTTCTGTCTATTATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAGCTGAGATTTGAATTACCCAGGGCTTGCTTCTGTCTATTATTC  922

seq1  TTTATGTAGACAATATTCAAAACTGTGTAAAGGCATGAGGTGTTCTACAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTAGACAATATTCAAAACTGTGTAAAGGCATGAGGTGTTCTACAA  972

seq1  TATTTTTTGTATGACAATTCAGCTTCATATCATTGAAAAGATTTTGATAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTGTATGACAATTCAGCTTCATATCATTGAAAAGATTTTGATAG  1022

seq1  GCATTCTGAGATCATAACCAATCTTCATAACATTCTTTAATTAAAATAGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTGAGATCATAACCAATCTTCATAACATTCTTTAATTAAAATAGG  1072

seq1  GAAATATGTCTGTGTTCTGAATAAACACCTTAAAAAAAGAACCCCTTTGG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATGTCTGTGTTCTGAATAAACACCTTAAAAAAAGAACCCCTTTGG  1122

seq1  GACCTAATGCCTGTTTATTATGAAGAATAGCACTAAATCGTGGAAGGAAT  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAATGCCTGTTTATTATGAAGAATAGCACTAAATCGTGGAAGGAAT  1172

seq1  TC  1202
      ||
seq2  TC  1174