BAC Information

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BAC

Clone NameB6Ng01-133K07
Chromosome1 (Build37)10 (Build37)
Map Location 119,739,502 - 119,739,647125,903,275 - 125,904,151
singlet/doubletsingletsinglet
Overlap geneLOC100041684
Upstream geneB020011L13Rik
Downstream geneLOC636972, EG666785, EG634762, LOC100042368, LOC637083, Tsn, Mki67ip, Clasp1, Tcfcp2l1, LOC100041753, Gli2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133K07.bB6Ng01-133K07.g
ACCDH934138DH934139
length8561,025
definitionDH934138|Mus musculus domesticus DNA, BAC clone: B6Ng01-133K07, 5' end.DH934139|Mus musculus domesticus DNA, BAC clone: B6Ng01-133K07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(119,739,502 - 119,739,647)(125,903,275 - 125,904,151)
sequence
gaattcctcaaggttgcaaggagaaataagagtgtcccatctgctttgat
atgattgaggaggcatacatgacaaaatgtggccacagcttttgctacaa
gtgtattcatcagagtttggaggacaataatagatgtcccaagtataacc
tggatcaatcaatccaggggtaatttgtaatccttttaaggcagatgatg
aacgtccgagcaatagtcctacagtatctttgggaaggggccctttaaaa
tctgtatctatgggctgtacccccatctgtggggttaatatgagtctggt
ggaggagtggtggtccaattctgcggagccagtagtagctctccgtggtc
tctccgatgatggagagacggccaaggtttcttctggtctttctgaagag
ccccatatatttgagggccctggtgacgtgggccccgttgtctgtttttt
ggcctagtgccatcatatcctgcctgtaatggtcggacttctatgtcctt
tgttgatctgcactcattagcccaatgttttcccttcctacatttatgac
ataagcctggctgtctaggtttatctaatgtggcccgtttttcattttca
gggcagtttcttctaaaatgtcctctttggccacacttataacaagcatt
attattagatctacccaactgtactacagctgtcgccaggcctgcattga
ttaatgggccccctagttctctgcaaaccttcatccatacttctaaacct
ttatgtgtatagggtgtaatggctgctctgcattctttagacattgctca
tatactagctgcttcaccaaaggcatagctgtatcaggtctccataaatt
ctagtg
gaattcaccagagagacaaggtggtaaaagcagccagggactaagaagga
aaggtaactgttgagccacatggcagaagttagaatagaataaacaggtt
aataagttatgagatagttgagaacaaacctagctacaaggcctatgcat
tcataataaatatggctccctgttctttgggagcagcaggtcccaaagaa
agtcctgttataaaattattcaatccaactccatctagggaactaatgcg
ctgctgggagttacctgcaggagcaaaaccttatccatggagctcttggt
ccaacctacaggcagttcctccagagaaagtctccttgccctaagcagtt
gttcattgtttatataacctgagccaggtgtctcagtcactggtctattg
ctgttaacacacaacacaagcaagacaacccttaaaagagaaagcattta
actagggacttgcttccagtttcagagggtcaatccattttcatcatggc
agagagcacagcatcatacaggcagatgttggagcagtagctgagaactt
tgtcctgatccacaggcagagagagaaagacttggtgtggtgtgacagtc
ttttgaaatctcaaagcccatgtccagtgatatactgccttcagaagtcc
acacctactccaaaatcagcacacctccttatccttctaatcctgtcaaa
gtgttctactccctatgtctaagtattcaaatacataagcttgtgagagt
cattcttattcaaactactatattcttcttcctggccctggtaggcttat
agacatatcataataaaaatatattcaacttcaaatccaacttgaaatgt
ccccatagtctataataatctcaacactgcttaaaggtccaaggtcaaag
tctttttccgagactcatggaaatctcttaactggtaatgcccctggaaa
atcaaaatcaaaaagcagatcatctacttcacatccatggcacggggtgt
gcattaccattccaaaggggaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_119739502_119739647
seq2: B6Ng01-133K07.b_45_188

seq1  GAATTCTTCAAGGTTGCAAGGAGAAATAAGAGAGAGTCCCATCTGCTTTG  50
      |||||| |||||||||||||||||||||  |||| |||||||||||||||
seq2  GAATTCCTCAAGGTTGCAAGGAGAAATA--AGAGTGTCCCATCTGCTTTG  48

seq1  ATATGATTGAGGAGGCATACATGACAAAATGTGGCCACAGCTTTTGCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATTGAGGAGGCATACATGACAAAATGTGGCCACAGCTTTTGCTAC  98

seq1  AAGTGTATTCATCAGAGTTTGGAGGACAATAATAGACGTCCCAAGT  146
      |||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAGTGTATTCATCAGAGTTTGGAGGACAATAATAGATGTCCCAAGT  144

seq1: chr10_125903275_125904151
seq2: B6Ng01-133K07.g_69_945

seq1  GAATTCACCAGAGAGACAAGGTGGTAAAAGCAGCCAGGGACTAAGAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAGAGAGACAAGGTGGTAAAAGCAGCCAGGGACTAAGAAGGA  50

seq1  AAGGTAACTGTTGAGCCACATGGCAGAAGTTAGAATAGAATAAACAGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAACTGTTGAGCCACATGGCAGAAGTTAGAATAGAATAAACAGGTT  100

seq1  AATAAGTTATGAGATAGTTGAGAACAAACCTAGCTACAAGGCCTATGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTTATGAGATAGTTGAGAACAAACCTAGCTACAAGGCCTATGCAT  150

seq1  TCATAATAAATATGGCTCCCTGTTCTTTGGGAGCAGCAGGTCCCAAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATAAATATGGCTCCCTGTTCTTTGGGAGCAGCAGGTCCCAAAGAA  200

seq1  AGTCCTGTTATAAAATTATTCAATCCAACTCCATCTAGGGAACTAATGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGTTATAAAATTATTCAATCCAACTCCATCTAGGGAACTAATGCG  250

seq1  CTGCTGGGAGTTACCTGCAGGAGCAAAACCTTATCCATGGAGCTCTTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGGAGTTACCTGCAGGAGCAAAACCTTATCCATGGAGCTCTTGGT  300

seq1  CCAACCTACAGGCAGTTCCTCCAGAGAAAGTCTCCTTGCCCTAAGCAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCTACAGGCAGTTCCTCCAGAGAAAGTCTCCTTGCCCTAAGCAGTT  350

seq1  GTTCATTGTTTATATAACCTGAGCCAGGTGTCTCAGTCACTGGTCTATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTGTTTATATAACCTGAGCCAGGTGTCTCAGTCACTGGTCTATTG  400

seq1  CTGTTAACACACAACACAAGCAAGACAACCCTTAAAAGAGAAAGCATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAACACACAACACAAGCAAGACAACCCTTAAAAGAGAAAGCATTTA  450

seq1  ACTAGGGACTTGCTTCCAGTTTCAGAGGGTCAATCCATTTTCATCATGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGGACTTGCTTCCAGTTTCAGAGGGTCAATCCATTTTCATCATGGC  500

seq1  AGAGAGCACAGCATCATACAGGCAGATGTTGGAGCAGTAGCTGAGAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCACAGCATCATACAGGCAGATGTTGGAGCAGTAGCTGAGAACTT  550

seq1  TGTCCTGATCCACAGGCAGAGAGAGAAAGACTTGGTGTGGTGTGACAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGATCCACAGGCAGAGAGAGAAAGACTTGGTGTGGTGTGACAGTC  600

seq1  TTTTGAAATCTCAAAGCCCATGTCCAGTGATATACTGCCTTCAGAAGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAATCTCAAAGCCCATGTCCAGTGATATACTGCCTTCAGAAGTCC  650

seq1  ACACCTACTCCAAAATCAGCACACCTCCTTATCCTTCTAATCCTGTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTACTCCAAAATCAGCACACCTCCTTATCCTTCTAATCCTGTCAAA  700

seq1  GTGTTCTACTCCCTATGTCTAAGTATTCAAATACATAAGCTTGTGAGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTACTCCCTATGTCTAAGTATTCAAATACATAAGCTTGTGAGAGT  750

seq1  CATTCTTATTCAAACTACTATATTCTTCTTCCTGGCCCTGGTAGGCTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTATTCAAACTACTATATTCTTCTTCCTGGCCCTGGTAGGCTTAT  800

seq1  AGACATATCATAATAAAAATATATTCAACTTCAAATCCAACTTGAAATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATATCATAATAAAAATATATTCAACTTCAAATCCAACTTGAAATGT  850

seq1  CCCCATAGTCTATAATAATCTCAACAC  877
      |||||||||||||||||||||||||||
seq2  CCCCATAGTCTATAATAATCTCAACAC  877