BAC Information

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BAC

Clone NameB6Ng01-133P19
Chromosome10 (Build37)
Map Location 58,314,587 - 58,445,194
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC211619, LOC668374, Pkib, Ppia-ps10_506.1, Fabp7, Smpdl3a, EG664783, 4933403O03Rik, EG245263, Gcc2, Lims1, Ranbp2, 6230424H07Rik, LOC100038981, Edar, LOC624335, LOC100039099
Downstream geneSh3md4, Sept10, Ankrd57, LOC664892, P4ha1, LOC100039174, Pla2g12b, Oit3, Ccdc109a, LOC100039225, Cbara1, EG664907, LOC664936, Dnajb12, Ddit4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133P19.bB6Ng01-133P19.g
ACCDH934397DH934398
length1,1941,099
definitionDH934397|Mus musculus domesticus DNA, BAC clone: B6Ng01-133P19, 5' end.DH934398|Mus musculus domesticus DNA, BAC clone: B6Ng01-133P19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,443,987 - 58,445,194)(58,314,587 - 58,315,684)
sequence
gaattcaccaagcttgggatatcaataggttggcaaacctgctccccact
ctgctaatttacaaaaaaagacgtcgtttcttcttctttttcaactcagc
ttaccaccacatgaaaagtcaaatagagttcttttcatgaccgaatactt
ctctattgattataaggcaacacttagcattccactcaggaaagaggctt
caagtggcagtaggaaaataacaggctcttatgctcaaaaagcacctcta
ccaggcacccaaaagaacacttcccttgacatacactggctgtgtgtgtt
ctcccttggccacactcatctcactgaaagtgtgtttgctcgaagcagtg
atcttagagccacggctttggcagctccttagaagcgtttcctaccactg
agcacagcgtgaacaggttagatcatgccaagcctgcaccgctgctgtct
ccttcaaagatctcatttcgatgatcatggagccctcccacggctgcccc
cacatggaaaggacttggggcttcaactcctggctttctctacaggctga
ccatttcatgttccattctcattcaccatggtcagccatggctctgaatc
agtcagccagctgggagggtaaggctgcagtgccaggaaaactggcagtt
cttaggagtcagcttgccttcagggtctggactgcagactaccacacaag
ccagagccacaagttacccttttttatcctcttttgatcctgaaggcatc
aatccggagcctcagaggactttggtttttatcggttctctacatggctg
acagtcccacacatatgtaggctaaaggctgctcacaactcaccactgta
ggcgtacattttttgcaatctacttttaataagggtgcgacctctcctct
agcccaccacccagcagaattagtggaagagaaacattattaggatatgg
ggggaagtggacctgatttgcaatacgggcaagcttaatcttctgggcag
cagttcagtcctgtagcaaacaccactattaactcagcagctgcagacca
gttctcttagcaagcagacaccagggcagacagcagctacagtccagtcc
tttcagcaagcaacccagcagctgtagttcatcttgaagaacatcagctt
aacaacgctggggcaagggcgtctgaatcgacctccagaacctc
gaattcagaagttctgctgcatcaagttgttcagggtttgccaaggccca
ccggtgaggtgggtgaaaggtagaaagtcgaggctgataggtagagagag
ggaggtgacaatggcctcctaaagggacagagagtatagcttctatctga
aatgttagaaagaaccgtaaaacatcttgtggctcaccagcctgcctggc
gggtgggaactacatgtctgtctgtttgatttctctttgttggggttgag
ctttgtcctggtgatgtcacagtgtgacccaagggtgggcgcttggatat
gcatctgcgacgtatcttcctggttgctcaaatttccttttattagtatt
taagaggtaattacttttctatatatcagttggtagaagggtaatccgac
aaggcatgttatcaggcaaatggctcttcatctttccctgggagtaaact
tggttgtaagaagttcagagcatgcgcatttaaaagacaacaggaaactg
gattgttagggtgttggaagagtacaaacagtgcagacagagggagcttg
gtttttgttttgtttttgttttttgtttgttttaggaaggttctaagtaa
aacattgtgttttaagtctttgatctaacgggattatttaatgaaatcaa
tgtgggacatcacatttcttgagtggtagaagatgctgggaagtttgtgt
gtcatgggggcaccgagatttctcagcacacgccttagatggcagcgtac
cctggactaaggcgctgacggtgtacagtccaaggaacttaaacatttac
tttagttcataaggaatagaacgctttggcagagaagactttttggagga
tagatgcagactggagacaaacacagctcatccaggactgtactgagcct
ggaggactggctctgtatgctggtggcttatgatcctttcaggctgggca
gagaggggactccatactctcttgtaaggtaaaggctttcttgtatccct
catcctcagcctggatacagtcactggctctgctgcaaccattacttgct
ggctcctgctcttggggtggcaccaagtctaggctgtcatgagcacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_58443987_58445194
seq2: B6Ng01-133P19.b_49_1242 (reverse)

seq1  GAGGTTCCTGTGGTGGTCGATTCAG-CAGCCTTGCCTCAAGCCGGTTGGT  49
      |||||||   ||| ||||||||||| |  ||||||| | |||  |||| |
seq2  GAGGTTC---TGGAGGTCGATTCAGACGCCCTTGCC-CCAGC--GTTGTT  44

seq1  AAGCCTGATGGTTTCTTCAGGATTGAACTACAGCTGCCTGGTGTCTGCTT  99
      ||| ||||||  ||||||| || ||||||||||||||  |||   |||||
seq2  AAG-CTGATG--TTCTTCAAGA-TGAACTACAGCTGCTGGGT---TGCTT  87

seq1  GCTGAAAGGACTGGACTGTAGCTGCTGGTTCTTGCCTGGTGTCTGCCTGC  149
      |||||||||||||||||||||||||||  |||  |||||||||||| |||
seq2  GCTGAAAGGACTGGACTGTAGCTGCTG--TCTGCCCTGGTGTCTGCTTGC  135

seq1  CTAGAGGACTGGTCTGCAGCTGCTGAGTT-ATAGTTGGTGTTTGCTACAG  198
        |||| |||||||||||||||||||||| |||| |||||||||||||||
seq2  TAAGAGAACTGGTCTGCAGCTGCTGAGTTAATAG-TGGTGTTTGCTACAG  184

seq1  GACTGAACTGCTGCCCAAGAAGATTAAGCTTGCCCGTATTGCAAATCAGG  248
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GACTGAACTGCTGCCC-AGAAGATTAAGCTTGCCCGTATTGCAAATCAGG  233

seq1  TCCACTT-CCCCCATATCCTAATAATGTTTCTCTTCCACTAATTCTGCTG  297
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTCCCCCCATATCCTAATAATGTTTCTCTTCCACTAATTCTGCTG  283

seq1  GGTGGTGGGCTAGAGGAGAGGTCGCACCCTTATTAAAAGTAGATTGCAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGGGCTAGAGGAGAGGTCGCACCCTTATTAAAAGTAGATTGCAAA  333

seq1  AAATGTACGCCTACAGTGGTGAGTTGTGAGCAGCCTTTAGCCTACATATG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTACGCCTACAGTGGTGAGTTGTGAGCAGCCTTTAGCCTACATATG  383

seq1  TGTGGGACTGTCAGCCATGTAGAGAACCGATAAAAACCAAAGTCCTCTGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGACTGTCAGCCATGTAGAGAACCGATAAAAACCAAAGTCCTCTGA  433

seq1  GGCTCCGGATTGATGCCTTCAGGATCAAAAGAGGATAAAAAAGGGTAACT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCGGATTGATGCCTTCAGGATCAAAAGAGGATAAAAAAGGGTAACT  483

seq1  TGTGGCTCTGGCTTGTGTGGTAGTCTGCAGTCCAGACCCTGAAGGCAAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTCTGGCTTGTGTGGTAGTCTGCAGTCCAGACCCTGAAGGCAAGC  533

seq1  TGACTCCTAAGAACTGCCAGTTTTCCTGGCACTGCAGCCTTACCCTCCCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCTAAGAACTGCCAGTTTTCCTGGCACTGCAGCCTTACCCTCCCA  583

seq1  GCTGGCTGACTGATTCAGAGCCATGGCTGACCATGGTGAATGAGAATGGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTGACTGATTCAGAGCCATGGCTGACCATGGTGAATGAGAATGGA  633

seq1  ACATGAAATGGTCAGCCTGTAGAGAAAGCCAGGAGTTGAAGCCCCAAGTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAATGGTCAGCCTGTAGAGAAAGCCAGGAGTTGAAGCCCCAAGTC  683

seq1  CTTTCCATGTGGGGGCAGCCGTGGGAGGGCTCCATGATCATCGAAATGAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCATGTGGGGGCAGCCGTGGGAGGGCTCCATGATCATCGAAATGAG  733

seq1  ATCTTTGAAGGAGACAGCAGCGGTGCAGGCTTGGCATGATCTAACCTGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGAAGGAGACAGCAGCGGTGCAGGCTTGGCATGATCTAACCTGTT  783

seq1  CACGCTGTGCTCAGTGGTAGGAAACGCTTCTAAGGAGCTGCCAAAGCCGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCTGTGCTCAGTGGTAGGAAACGCTTCTAAGGAGCTGCCAAAGCCGT  833

seq1  GGCTCTAAGATCACTGCTTCGAGCAAACACACTTTCAGTGAGATGAGTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTAAGATCACTGCTTCGAGCAAACACACTTTCAGTGAGATGAGTGT  883

seq1  GGCCAAGGGAGAACACACACAGCCAGTGTATGTCAAGGGAAGTGTTCTTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGGGAGAACACACACAGCCAGTGTATGTCAAGGGAAGTGTTCTTT  933

seq1  TGGGTGCCTGGTAGAGGTGCTTTTTGAGCATAAGAGCCTGTTATTTTCCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGCCTGGTAGAGGTGCTTTTTGAGCATAAGAGCCTGTTATTTTCCT  983

seq1  ACTGCCACTTGAAGCCTCTTTCCTGAGTGGAATGCTAAGTGTTGCCTTAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCACTTGAAGCCTCTTTCCTGAGTGGAATGCTAAGTGTTGCCTTAT  1033

seq1  AATCAATAGAGAAGTATTCGGTCATGAAAAGAACTCTATTTGACTTTTCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATAGAGAAGTATTCGGTCATGAAAAGAACTCTATTTGACTTTTCA  1083

seq1  TGTGGTGGTAAGCTGAGTTGAAAAAGAAGAAGAAACGACGTCTTTTTTTG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGGTAAGCTGAGTTGAAAAAGAAGAAGAAACGACGTCTTTTTTTG  1133

seq1  TAAATTAGCAGAGTGGGGAGCAGGTTTGCCAACCTATTGATATCCCAAGC  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAGCAGAGTGGGGAGCAGGTTTGCCAACCTATTGATATCCCAAGC  1183

seq1  TTGGTGAATTC  1208
      |||||||||||
seq2  TTGGTGAATTC  1194

seq1: chr10_58314587_58315684
seq2: B6Ng01-133P19.g_65_1163

seq1  GAATTCAGAAGTTCTGCTGCATCAAGTTGTTCAGGGTTTGCCAAGGCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAGTTCTGCTGCATCAAGTTGTTCAGGGTTTGCCAAGGCCCA  50

seq1  CCGGTGAGGTGGGTGAAAGGTAGAAAGTCGAGGCTGATAGGTAGAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTGAGGTGGGTGAAAGGTAGAAAGTCGAGGCTGATAGGTAGAGAGAG  100

seq1  GGAGGTGACAATGGCCTCCTAAAGGGACAGAGAGTATAGCTTCTATCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGACAATGGCCTCCTAAAGGGACAGAGAGTATAGCTTCTATCTGA  150

seq1  AATGTTAGAAAGAACCGTAAAACATCTTGTGGCTCACCAGCCTGCCTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAGAAAGAACCGTAAAACATCTTGTGGCTCACCAGCCTGCCTGGC  200

seq1  GGGTGGGAACTACATGTCTGTCTGTTTGATTTCTCTTTGTTGGGGTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGAACTACATGTCTGTCTGTTTGATTTCTCTTTGTTGGGGTTGAG  250

seq1  CTTTGTCCTGGTGATGTCACAGTGTGACCCAAGGGTGGGCGCTTGGATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCCTGGTGATGTCACAGTGTGACCCAAGGGTGGGCGCTTGGATAT  300

seq1  GCATCTGCGACGTATCTTCCTGGTTGCTCAAATTTCCTTTTATTAGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGCGACGTATCTTCCTGGTTGCTCAAATTTCCTTTTATTAGTATT  350

seq1  TAAGAGGTAATTACTTTTCTATATATCAGTTGGTAGAAGGGTAATCCGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGTAATTACTTTTCTATATATCAGTTGGTAGAAGGGTAATCCGAC  400

seq1  AAGGCATGTTATCAGGCAAATGGCTCTTCATCTTTCCCTGGGAGTAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATGTTATCAGGCAAATGGCTCTTCATCTTTCCCTGGGAGTAAACT  450

seq1  TGGTTGTAAGAAGTTCAGAGCATGCGCATTTAAAAGACAACAGGAAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTAAGAAGTTCAGAGCATGCGCATTTAAAAGACAACAGGAAACTG  500

seq1  GATTGTTAGGGTGTTGGAAGAGTACAAACAGTGCAGACAGAGGGAGCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTAGGGTGTTGGAAGAGTACAAACAGTGCAGACAGAGGGAGCTTG  550

seq1  GTTTTTGTTTTGTTTTTGTTTTTTGTTTGTTTTAGGAAGGTTCTAAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTTTTGTTTTTGTTTTTTGTTTGTTTTAGGAAGGTTCTAAGTAA  600

seq1  AACATTGTGTTTTAAGTCTTTGATCTAACGGGATTATTTAATGAAATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGTGTTTTAAGTCTTTGATCTAACGGGATTATTTAATGAAATCAA  650

seq1  TGTGGGACATCACATTTCTTGAGTGGTAGAAGATGCTGGGAAGTTTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGACATCACATTTCTTGAGTGGTAGAAGATGCTGGGAAGTTTGTGT  700

seq1  GTCAT-GGGGCACCGAGATTTCTCAGCACACGCCTTAGATGGCAGCGTAC  749
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGGGGCACCGAGATTTCTCAGCACACGCCTTAGATGGCAGCGTAC  750

seq1  CCTGGACTAAGGCGCTGACGGTGTACAGTCCAAGGAACTTAAACATTTAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACTAAGGCGCTGACGGTGTACAGTCCAAGGAACTTAAACATTTAC  800

seq1  TTTAGTTCATAAGGAATAGAACGC-TTGGCAGAGAAGACGTCTTTGGAGG  848
      |||||||||||||||||||||||| |||||||||||||| | ||||||||
seq2  TTTAGTTCATAAGGAATAGAACGCTTTGGCAGAGAAGAC-TTTTTGGAGG  849

seq1  ATAGATGCAGACTGGAGACAAACACAGCTCATCCAGGACTGTACTGAGCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGCAGACTGGAGACAAACACAGCTCATCCAGGACTGTACTGAGCC  899

seq1  TGGAGGACTGGCTCTGTATGCTGGTGGCTTATGATCCTTCCAGGCTGGGC  948
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGGAGGACTGGCTCTGTATGCTGGTGGCTTATGATCCTTTCAGGCTGGGC  949

seq1  AGAAGAGGGGAC-CCATACTCTCTTGTCAGGTAAAGGCTTTCTTGTATCC  997
      || ||||||||| |||||||||||||| ||||||||||||||||||||||
seq2  AG-AGAGGGGACTCCATACTCTCTTGTAAGGTAAAGGCTTTCTTGTATCC  998

seq1  CTCATCCTCAGCCTGGATACAGTCACT-GCTCTGCTGCCAACCATTTACT  1046
      ||||||||||||||||||||||||||| ||||||||| |||||| |||||
seq2  CTCATCCTCAGCCTGGATACAGTCACTGGCTCTGCTG-CAACCA-TTACT  1046

seq1  TGCTGGCTCCTGCTC-TGGGTTGGCACCAGGTCTAGGCTGTCATGAGCAC  1095
      ||||||||||||||| |||| |||||||| ||||||||||||||||||||
seq2  TGCTGGCTCCTGCTCTTGGGGTGGCACCAAGTCTAGGCTGTCATGAGCAC  1096

seq1  ATT  1098
      |||
seq2  ATT  1099