BAC Information

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BAC

Clone NameB6Ng01-138F10
Chromosome10 (Build37)
Map Location 26,276,974 - 26,431,180
singlet/doubletdoublet
Overlap geneLOC667572
Upstream geneEG667513, LOC667519, LOC628697, C030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208
Downstream geneLOC100040349, Arhgap18, Lama2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138F10.bB6Ng01-138F10.g
ACCDH937628DH937629
length1,111953
definitionDH937628|Mus musculus domesticus DNA, BAC clone: B6Ng01-138F10, 5' end.DH937629|Mus musculus domesticus DNA, BAC clone: B6Ng01-138F10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,276,974 - 26,278,092)(26,430,230 - 26,431,180)
sequence
gaattccctgaagaatgtgccatactatgtatttttgtataaaactatat
tgttagttacttgttgattcctaagatcaatttaattttctttttctttt
ttaaaaagatttatttttgtgtatgttggtgttttcttttttttgtttgt
ttttgttttttttttctgtgtgtatatctgtgtgagagtaccatatttcc
caagagctggagttacagatagttgtgagctgccatgtgggtgctgggaa
atgaactgcgttctgtagaagagcagcgagtggtcgtaactgtggaactg
tctccccagccaccaacttatttttctttacacagtcataaaaatatgtt
taaaacatatctttaggactgtccaaatggctgagtggctagaagtgcct
gcatggagagctctgagcaacctgagtttgattcgcagatgccagaaggt
agaggaaagatctgacaccagacagtgtcctttgacctccacataacccc
ttgccttggcatctcatatgtactcaaacatatctacaatacttgatgat
taatgagtaaataaataaattttaaattattggtgaatattatttgtaca
aaatattttgtctcatttcaaaaataattttaaattaataaacaaatggg
ttattgtataacatcatatacatgtacaccatgctcttaccatgtgcccc
attctcttctgcttcccaaagcactctctctttcctaatagttatacttg
tactttaaaaatatttctcactctttttctctaaggcctcagatctattc
tactcacacagtaagcccacgtgttgatattacaatatttgtactagtta
acttctgaaactgaccccagtgatccacaatacctttgatatcacacctt
aataaagacttgaagctttgtcacaaagagattgtagaagagccatacag
ggactctcaaagttgttgatggtttacatctcctctgctctcagcttcca
gcttcttttaactcagagagcttccatatattggtgaggaccactgggta
tgttatttggaaagaacctgcgcacctagagggcccacctggccagtggg
aactgtcagtg
gaattcaacgagacacatagaaaataaattctacaactgtttgaaaggag
ggttgcatgtggtttataaatttcactgtctcttttgttctcaccgccat
cttgtggccattgggagaatatttcactaagttttcctgtggaagcctgg
ctaggaaaatggaagcctgatttcacaaagaacaaacctaattcaatgct
ctgcctttgttctttcccatgaagtgaagtcgctgctttctggcagtgat
actcagataattactaatagatcaggtacttgactttgttctgggacatg
gagggacagtcttgttttttctattgatgtctactgctcatcattaccaa
tgaaggatttcagcagaacaaaaccgaggaacatgaaatattcacttaaa
aaattaagtaatgggggcccagagaattggctcagtggataaagaaactt
gctgtgcaagaataaagacctgaactgaggtcccagcacctatgagaaag
ccaggcatggtggtgcatgcctggaatccaatcgatatggatgccagaga
caggaggctggctagggcttctggtctgatggcctagcagtgtgggacac
tgtctcagggaataatacagggcaggagatgtaagacttaatctaaagta
gcatagcatctgatatctttctgtggctttctgtatatgtacccagatat
acacgtgtacatacccccacctccacagacacacgcgtgcacatgcactc
acacaggtacacgcacacacacacacacacacaagtagtaatatactttt
ggttagacagaccaataactgagaattttgggaatgttatatttcattca
actgcagttcatcatctataaagtaggtataatatcgttcagctatactc
ataagcttactctgacagtgttcatggggaaacgcttttgtagaaaatac
taa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26276974_26278092
seq2: B6Ng01-138F10.b_49_1159

seq1  GAATTCCCTGAAGAATGTGCCATACTATGTATTTTTGTATAAAACTATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGAAGAATGTGCCATACTATGTATTTTTGTATAAAACTATAT  50

seq1  TGTTAGTTACTTGTTGATTCCTAAGATCAATTTAATTTTCTTTTTCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTTACTTGTTGATTCCTAAGATCAATTTAATTTTCTTTTTCTTTT  100

seq1  TTAAAAAGATTTATTTTTGTGTATGTTGGTGTTTTCTTTTTTTTGTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGATTTATTTTTGTGTATGTTGGTGTTTTCTTTTTTTTGTTTGT  150

seq1  TTTTGTTTTTTTTTTCTGTGTGTATATCTGTGTGAGAGTACCATATTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTTTTTTCTGTGTGTATATCTGTGTGAGAGTACCATATTTCC  200

seq1  CAAGAGCTGGAGTTACAGATAGTTGTGAGCTGCCATGTGGGTGCTGGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGCTGGAGTTACAGATAGTTGTGAGCTGCCATGTGGGTGCTGGGAA  250

seq1  ATGAACTGCGTTCTGTAGAAGAGCAGCGAGTGGTCGTAACTGTGGAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTGCGTTCTGTAGAAGAGCAGCGAGTGGTCGTAACTGTGGAACTG  300

seq1  TCTCCCCAGCCACCAACTTATTTTTCTTTACACAGTCATAAAAATATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCAGCCACCAACTTATTTTTCTTTACACAGTCATAAAAATATGTT  350

seq1  TAAAACATATCTTTAGGACTGTCCAAATGGCTGAGTGGCTAGAAGTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACATATCTTTAGGACTGTCCAAATGGCTGAGTGGCTAGAAGTGCCT  400

seq1  GCATGGAGAGCTCTGAGCAACCTGAGTTTGATTCGCAGATGCCAGAAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGAGAGCTCTGAGCAACCTGAGTTTGATTCGCAGATGCCAGAAGGT  450

seq1  AGAGGAAAGATCTGACACCAGACAGTGTCCTTTGACCTCCACATAACCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAAGATCTGACACCAGACAGTGTCCTTTGACCTCCACATAACCCC  500

seq1  TTGCCTTGGCATCTCATATGTACTCAAACATATCTACAATACTTGATGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTGGCATCTCATATGTACTCAAACATATCTACAATACTTGATGAT  550

seq1  TAATGAGTAAATAAATAAATTTTAAATTATTGGTGAATATTATTTGTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGTAAATAAATAAATTTTAAATTATTGGTGAATATTATTTGTACA  600

seq1  AAATATTTTGTCTCATTTCAAAAATAATTTTAAATTAATAAACAAATGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTGTCTCATTTCAAAAATAATTTTAAATTAATAAACAAATGGG  650

seq1  TTATTGTATAACATCATATACATGTACACCATGCTCTTACCATGTGCCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTATAACATCATATACATGTACACCATGCTCTTACCATGTGCCCC  700

seq1  ATTCTCTTCTGCTTCCCAAAGCACTCTCTCTTTCCTAATAGTTATACTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTTCTGCTTCCCAAAGCACTCTCTCTTTCCTAATAGTTATACTTG  750

seq1  TACTTTAAAAATATTTCTCACTCTTTTTCTCTAAGGCCTCAGATCTATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAAAAATATTTCTCACTCTTTTTCTCTAAGGCCTCAGATCTATTC  800

seq1  TACTCACACAGTAAGCCCACGTGTTGATATTAACAATATTTGTACTAGTT  850
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TACTCACACAGTAAGCCCACGTGTTGATATT-ACAATATTTGTACTAGTT  849

seq1  AACTTCTGAAACTGACCCCAGTGATCCACAATACCTTTGATATTCACACC  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AACTTCTGAAACTGACCCCAGTGATCCACAATACCTTTGATA-TCACACC  898

seq1  -TAATAAAGAC-TGAAGCTTTGTCACAAAGAGATTGTAGAAGAAGCCATA  948
       |||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  TTAATAAAGACTTGAAGCTTTGTCACAAAGAGATTGTAGAAG-AGCCATA  947

seq1  CA-GGACTCTCAAAGTTGTTGATGGTTTTACATCTCCCTCTGCTCTCAGC  997
      || |||||||||||||||||||||| ||||||||| ||||||||||||||
seq2  CAGGGACTCTCAAAGTTGTTGATGG-TTTACATCT-CCTCTGCTCTCAGC  995

seq1  TCCCAGCTTCTTTAAACTCCAAGAGAAGCTTCCATATATT-GTGAGGAAC  1046
      | ||||||||||| |||||  |||| |||||||||||||| |||||| ||
seq2  TTCCAGCTTCTTTTAACTC--AGAG-AGCTTCCATATATTGGTGAGG-AC  1041

seq1  CACTTGGTAAAGGTTATGTGGAAAGAAACTGCGGCACTAGAGGGCCCCAC  1096
      |||| |||  | ||||| ||||||||| |||||   |||||||| |||||
seq2  CACTGGGT--ATGTTATTTGGAAAGAACCTGCGCACCTAGAGGG-CCCAC  1088

seq1  CCTGCCAGTGGATACTGTCAGTG  1119
      |  ||||||||  ||||||||||
seq2  CTGGCCAGTGGGAACTGTCAGTG  1111

seq1: chr10_26430230_26431180
seq2: B6Ng01-138F10.g_70_1022 (reverse)

seq1  TTAGTATTCTCT-CAAAAGCGTTT-CCCATGACCACTGTCAGAGATAGC-  47
      |||||||| ||| ||||||||||| ||||||| |||||||||||  ||| 
seq2  TTAGTATTTTCTACAAAAGCGTTTCCCCATGAACACTGTCAGAGTAAGCT  50

seq1  TATGATGTATAGCTGACCGATATTATACCTACTTTATAGATGATGAACTG  97
      ||||| |||||||||| |||||||||||||||||||||||||||||||||
seq2  TATGA-GTATAGCTGAACGATATTATACCTACTTTATAGATGATGAACTG  99

seq1  CAGTTGAATGAAGTATATACATTCCCAAAATTCTCAGTTATTGGTCTGTC  147
      |||||||||||| |||| ||||||||||||||||||||||||||||||||
seq2  CAGTTGAATGAAATATA-ACATTCCCAAAATTCTCAGTTATTGGTCTGTC  148

seq1  TAACCAAAAGTATATTACTACTTGTGTGTGTGTGTGTGTGTGCGTGTACC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAAAGTATATTACTACTTGTGTGTGTGTGTGTGTGTGCGTGTACC  198

seq1  TGTGTGAGTGCATGTGCACGCGTGTGTCTGTGGAGGTGGGGGTATGTACA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAGTGCATGTGCACGCGTGTGTCTGTGGAGGTGGGGGTATGTACA  248

seq1  CGTGTATATCTGGGTACATATACAG-AAGCCACAGAAAGATATCAGATGC  296
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CGTGTATATCTGGGTACATATACAGAAAGCCACAGAAAGATATCAGATGC  298

seq1  TATGCTACTTTAGATTAAGTCTTACATCTCCTGCCCTGTATTATTCCCTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTACTTTAGATTAAGTCTTACATCTCCTGCCCTGTATTATTCCCTG  348

seq1  AGACAGTGTCCCACACTGCTAGGCCATCAGACCAGAAGCCCTAGCCAGCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTGTCCCACACTGCTAGGCCATCAGACCAGAAGCCCTAGCCAGCC  398

seq1  TCCTGTCTCTGGCATCCATATCGATTGGATTCCAGGCATGCACCACCATG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCTCTGGCATCCATATCGATTGGATTCCAGGCATGCACCACCATG  448

seq1  CCTGGCTTTCTCATAGGTGCTGGGACCTCAGTTCAGGTCTTTATTCTTGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTTTCTCATAGGTGCTGGGACCTCAGTTCAGGTCTTTATTCTTGC  498

seq1  ACAGCAAGTTTCTTTATCCACTGAGCCAATTCTCTGGGCCCCCATTACTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAGTTTCTTTATCCACTGAGCCAATTCTCTGGGCCCCCATTACTT  548

seq1  AATTTTTTAAGTGAATATTTCATGTTCCTCGGTTTTGTTCTGCTGAAATC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTAAGTGAATATTTCATGTTCCTCGGTTTTGTTCTGCTGAAATC  598

seq1  CTTCATTGGTAATGATGAGCAGTAGACATCAATAGAAAAAACAAGACTGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTGGTAATGATGAGCAGTAGACATCAATAGAAAAAACAAGACTGT  648

seq1  CCCTCCATGTCCCAGAACAAAGTCAAGTACCTGATCTATTAGTAATTATC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCATGTCCCAGAACAAAGTCAAGTACCTGATCTATTAGTAATTATC  698

seq1  TGAGTATCACTGCCAGAAAGCAGCGACTTCACTTCATGGGAAAGAACAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATCACTGCCAGAAAGCAGCGACTTCACTTCATGGGAAAGAACAAA  748

seq1  GGCAGAGCATTGAATTAGGTTTGTTCTTTGTGAAATCAGGCTTCCATTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGCATTGAATTAGGTTTGTTCTTTGTGAAATCAGGCTTCCATTTT  798

seq1  CCTAGCCAGGCTTCCACAGGAAAACTTAGTGAAATATTCTCCCAATGGCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCCAGGCTTCCACAGGAAAACTTAGTGAAATATTCTCCCAATGGCC  848

seq1  ACAAGATGGCGGTGAGAACAAAAGAGACAGTGAAATTTATAAACCACATG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATGGCGGTGAGAACAAAAGAGACAGTGAAATTTATAAACCACATG  898

seq1  CAACCCTCCTTTCAAACAGTTGTAGAATTTATTTTCTATGTGTCTCGTTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTCCTTTCAAACAGTTGTAGAATTTATTTTCTATGTGTCTCGTTG  948

seq1  AATTC  951
      |||||
seq2  AATTC  953