BAC Information

Click to search

BAC

Clone NameB6Ng01-140I12
Chromosome10 (Build37)
Map Location 126,058,799 - 126,231,908
singlet/doubletdoublet
Overlap genenone
Upstream geneLrig3, LOC100043547
Downstream geneLOC668336, Xrcc6bp1, LOC622567, Ctdsp2, Avil, Tsfm, Mettl1, Cyp27b1, March9, Cdk4, Tspan31, Centg1, Os9, LOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140I12.bB6Ng01-140I12.g
ACCDH939238DH939239
length1,120959
definitionDH939238|Mus musculus domesticus DNA, BAC clone: B6Ng01-140I12, 5' end.DH939239|Mus musculus domesticus DNA, BAC clone: B6Ng01-140I12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,058,799 - 126,059,931)(126,230,949 - 126,231,908)
sequence
gaattccttccagaatattaaatagctctcaccaagcccaattaggtcat
aactgaatcgagcgcaaagcatccccatctacagggcacaccgaaatgtc
agagtgctttcagcagccctcacatgggaggtatgcctcaccctgggagg
ctgggctctgtgggagcatcagagacacacctctctccccacacatctct
gaggagcacatcaggcaaagaatgatgtggccatgggtgttttaagatgt
acttcaaacagcaacttagagatcagattctgaagtagggcagcatgcaa
gggaccacaaagagggagcgagtcaagagatcttaaggaggccaaatgaa
tgtggtttcttggatcactggtatggggagcaagcatgatgatattaaaa
caaaaatctaggttgagttaacaaaagtgcaggtgggggctagagagatg
gctcagcagttaagagcactgactgctcttcgtaaagtcctgagttcaaa
cccagcaaccgcatgatggctcacaaccatctgtaatgagatctgacgtc
ctcttctggtgagtctgaagacagctacagtttacttacatataataata
aataaatctttggaccagagcaagcagggctggagtgagcagaggtcctg
agttcaattcccagcaaccacatgatggctcacaaccatctctacagcta
cagtgtagtcatatacataaaataaataaatctttctaaaaagtgtaggt
gggatcacagactgatcttttaaggaaggaaattaatttcatgtcagaca
tgttgaattcaggacatgaagtaacaacagaaaatgggattcacattagg
tctgaagcttgaaagagaagtaaattcttgatgacaaggccttaggagtc
acagatatacaactgtactgggtagttttttctgtcaacttgacacaaac
tagagtcgcctggggaagaagagtagcagatggaggattgctccatcagc
ctgatcttagtagtctacatgcattctggatatgactgatgagcagtctg
gtctactatgggcgatgccatcccttacaagcatctggcttttataagaa
gacaggcaagcaagccggta
gaattcagttgggagacacagacgttataaatagaaatttacttagcaaa
ggaaaagcaaagtgtatttgagagagactggagtgggctgccctgagggt
cagggaacaggaagttctccggtgttgagtttgagcgggttttatgaaca
caggggaggtaggtatgtttattaggtaaagtaatgcttttctccttccc
aaattatgatgaggtatttcttgattttttttttctagaaaagtccacaa
gataggggttcaaaatcccaatgtaaacagcattataaagaagccaagat
ctttgaggaagcaggaccgcccccatcagtgcgcatgcgtagtagaatgc
cctggttctgcctctgagaggcacggctattgtgacgcagcttctgtttc
cttagttacttcatgaaactgcctagggtcccatgatgattatcacggct
aactgttggttaagacagtttgccgtgtttaaacttgaggttttatcaca
aaagctgggaatgagttttacgacattttgtcaaggtgtccaaacaggaa
gaatgtttgccttctatctaggacctgtctcccagcttcactgctcatag
gtatcctgtatcttacaatgcttttattccagtggtaagaaaggtctgtg
taaaaatggcaactggatcttggcataaactacttcaccgttgtctttcc
tcctccttctttccatttttgcccttcatagcactccagttgcactgtgg
ttagtaatagatcttttatattccgtcagctttcgcctgttttttaggag
cgtttttacttaacaaagggcgtttcgatgatacgaagcactagaagaga
acggaatagggcgtcttggtggcaagcgaaagaaattgaacttcagacac
attacagttgacttactggtatattcaggaaaaggatggggttagatctg
tcgtcagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_126058799_126059931
seq2: B6Ng01-140I12.b_44_1163

seq1  GAATTCCTTCCAGAATATTAAATAGCTCTCACCAAGCCCAATTAGGTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCAGAATATTAAATAGCTCTCACCAAGCCCAATTAGGTCAT  50

seq1  AACTGAATCGAGCGCAAAGCATCCCCATCTACAGGGCACACCGAAATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAATCGAGCGCAAAGCATCCCCATCTACAGGGCACACCGAAATGTC  100

seq1  AGAGTGCTTTCAGCAGCCCTCACATGGGAGGTATGCCTCACCCTGGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCTTTCAGCAGCCCTCACATGGGAGGTATGCCTCACCCTGGGAGG  150

seq1  CTGGGCTCTGTGGGAGCATCAGAGACACACCTCTCTCCCCACACATCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTCTGTGGGAGCATCAGAGACACACCTCTCTCCCCACACATCTCT  200

seq1  GAGGAGCACATCAGGCAAAGAATGATGTGGCCATGGGTGTTTTAAGATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCACATCAGGCAAAGAATGATGTGGCCATGGGTGTTTTAAGATGT  250

seq1  ACTTCAAACAGCAACTTAGAGATCAGATTCTGAAGTAGGGCAGCATGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAACAGCAACTTAGAGATCAGATTCTGAAGTAGGGCAGCATGCAA  300

seq1  GGGACCACAAAGAGGGAGCGAGTCAAGAGATCTTAAGGAGGCCAAATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCACAAAGAGGGAGCGAGTCAAGAGATCTTAAGGAGGCCAAATGAA  350

seq1  TGTGGTTTCTTGGATCACTGGTATGGGGAGCAAGCATGATGATATTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTCTTGGATCACTGGTATGGGGAGCAAGCATGATGATATTAAAA  400

seq1  CAAAAATCTAGGTTGAGTTAACAAAAGTGCAGGTGGGGGCTAGAGAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATCTAGGTTGAGTTAACAAAAGTGCAGGTGGGGGCTAGAGAGATG  450

seq1  GCTCAGCAGTTAAGAGCACTGACTGCTCTTCGTAAAGTCCTGAGTTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGCAGTTAAGAGCACTGACTGCTCTTCGTAAAGTCCTGAGTTCAAA  500

seq1  CCCAGCAACCGCATGATGGCTCACAACCATCTGTAATGAGATCTGACGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAACCGCATGATGGCTCACAACCATCTGTAATGAGATCTGACGTC  550

seq1  CTCTTCTGGTGAGTCTGAAGACAGCTACAGTTTACTTACATATAATAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGGTGAGTCTGAAGACAGCTACAGTTTACTTACATATAATAATA  600

seq1  AATAAATCTTTGGACCAGAGCAAGCAGGGCTGGAGTGAGCAGAGGTCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATCTTTGGACCAGAGCAAGCAGGGCTGGAGTGAGCAGAGGTCCTG  650

seq1  AGTTCAATTCCCAGCAACCACATGATGGCTCACAACCATCTCTACAGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAATTCCCAGCAACCACATGATGGCTCACAACCATCTCTACAGCTA  700

seq1  CAGTGTAGTCATATACATAAAATAAATAAATCTTTCTAAAAAGTGTAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTAGTCATATACATAAAATAAATAAATCTTTCTAAAAAGTGTAGGT  750

seq1  GGGATCACAGACTGATCTTTTAAGGAAGGAAATTAATTTCATGTCAGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCACAGACTGATCTTTTAAGGAAGGAAATTAATTTCATGTCAGACA  800

seq1  TGTTGAATTCAGGACATGAAGTAAACAACAGAAAATGGGATTCACATTAG  850
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGTTGAATTCAGGACATGAAGT-AACAACAGAAAATGGGATTCACATTAG  849

seq1  GTCTGAAGCTTGAAAGAGAAGTAAATTC-TGATGACAAGGCCTTAGGAGT  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTCTGAAGCTTGAAAGAGAAGTAAATTCTTGATGACAAGGCCTTAGGAGT  899

seq1  CACAGATATACAACTGTACTGGGTAG-TTTTTCTGTCAACTTGACACAAA  948
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CACAGATATACAACTGTACTGGGTAGTTTTTTCTGTCAACTTGACACAAA  949

seq1  CTAGAGTCGCCT-GGGAAGAAGAGTAGCAGATGAGGAATTGCTCCATCAG  997
      |||||||||||| ||||||||||||||||||||  | |||||||||||||
seq2  CTAGAGTCGCCTGGGGAAGAAGAGTAGCAGATGGAGGATTGCTCCATCAG  999

seq1  CCTGATCTTTAGGTAAGTCTTACATGCATTTCCTTGATTAATGACTGATG  1047
      ||||||| ||||   |||| ||||||||||  || |||  ||||||||||
seq2  CCTGATC-TTAG--TAGTC-TACATGCATT--CTGGAT--ATGACTGATG  1041

seq1  TAGCCAGGTCTGGTCTACTATGGGCGATGCCATCCCTTAGCAAGCAGTCC  1097
       |||   |||||||||||||||||||||||||||||||| ||||||   |
seq2  -AGC--AGTCTGGTCTACTATGGGCGATGCCATCCCTTA-CAAGCA--TC  1085

seq1  TGGCTTATATAAGAGAGCAGGCCAAGCAAGCCGGTA  1133
      |||||| |||||||   |||| ||||||||||||||
seq2  TGGCTTTTATAAGAAGACAGG-CAAGCAAGCCGGTA  1120

seq1: chr10_126230949_126231908
seq2: B6Ng01-140I12.g_67_1023 (reverse)

seq1  CTGACGACAGATCTAACCCCATCCTTTTCCTGAAATATTACCAGTAAGTC  50
      |||||||||||||||||||||||||||||||| |||| ||||||||||||
seq2  CTGACGACAGATCTAACCCCATCCTTTTCCTG-AATA-TACCAGTAAGTC  48

seq1  AAACTCTATGTTGTCTGTAGTTCAATTTCTTTCGCTTGCCACCAAGAACG  100
       |||| ||   |||||| |||||||||||||||||||||||||||| |||
seq2  -AACTGTAATGTGTCTGAAGTTCAATTTCTTTCGCTTGCCACCAAG-ACG  96

seq1  CCCTATTCCGTTCTCTTCTAGTGCTTCGTATCCTCGGAAACGCCCTTTGT  150
      |||||||||||||||||||||||||||||||| || ||||||||||||||
seq2  CCCTATTCCGTTCTCTTCTAGTGCTTCGTATCATC-GAAACGCCCTTTGT  145

seq1  TAAGTAGAAACGCCTCCTAAGAAACAGGCG-AAGCTGACGGAATAT-AAA  198
      |||||| ||||| ||||||| ||||||||| ||||||||||||||| |||
seq2  TAAGTAAAAACG-CTCCTAAAAAACAGGCGAAAGCTGACGGAATATAAAA  194

seq1  GGTCTATTACTAACCACAGTGCAACTGGAGTGCTATGAAGGGCAAAAATG  248
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTATTACTAACCACAGTGCAACTGGAGTGCTATGAAGGGCAAAAATG  244

seq1  GAAAGAAGGAGGAGGAAAGACAACGGTGAAGTAGTTTATGCCAAGATCCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGGAGGAGGAAAGACAACGGTGAAGTAGTTTATGCCAAGATCCA  294

seq1  GTTGCCATTTTTACACAGACCTTTCTTACCACTGGAAT-AAAGCATTGTA  347
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTTGCCATTTTTACACAGACCTTTCTTACCACTGGAATAAAAGCATTGTA  344

seq1  AGATACAGGATACCTATGAGCAGTGAAGCTGGGAGACAGGTCCTAGATAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACAGGATACCTATGAGCAGTGAAGCTGGGAGACAGGTCCTAGATAG  394

seq1  AAGGCAAACATTCTTCCTGTTTGGACACCTTGACAAAATGTCGTAAAACT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAACATTCTTCCTGTTTGGACACCTTGACAAAATGTCGTAAAACT  444

seq1  CATTCCCAGCTTTTGTGATAAAACCTCAAGTTTAAACACGGCAAACTGTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCAGCTTTTGTGATAAAACCTCAAGTTTAAACACGGCAAACTGTC  494

seq1  TTAACCAACAGTTAGCCGTGATAATCATCATGGGACCCTAGGCAGTTTCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAACAGTTAGCCGTGATAATCATCATGGGACCCTAGGCAGTTTCA  544

seq1  TGAAGTAACTAAGGAAACAGAAGCTGCGTCACAATAGCCGTGCCTCTCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTAACTAAGGAAACAGAAGCTGCGTCACAATAGCCGTGCCTCTCAG  594

seq1  AGGCAGAACCAGGGCATTCTACTACGCATGCGCACTGATGGGGGCGGTCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAACCAGGGCATTCTACTACGCATGCGCACTGATGGGGGCGGTCC  644

seq1  TGCTTCCTCAAAGATCTTGGCTTCTTTATAATGCTGTTTACATTGGGATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTCAAAGATCTTGGCTTCTTTATAATGCTGTTTACATTGGGATT  694

seq1  TTGAACCCCTATCTTGTGGACTTTTCTAGAAAAAAAAAATCAAGAAATAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACCCCTATCTTGTGGACTTTTCTAGAAAAAAAAAATCAAGAAATAC  744

seq1  CTCATCATAATTTGGGAAGGAGAAAAGCATTACTTTACCTAATAAACATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCATAATTTGGGAAGGAGAAAAGCATTACTTTACCTAATAAACATA  794

seq1  CCTACCTCCCCTGTGTTCATAAAACCCGCTCAAACTCAACACCGGAGAAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTCCCCTGTGTTCATAAAACCCGCTCAAACTCAACACCGGAGAAC  844

seq1  TTCCTGTTCCCTGACCCTCAGGGCAGCCCACTCCAGTCTCTCTCAAATAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTTCCCTGACCCTCAGGGCAGCCCACTCCAGTCTCTCTCAAATAC  894

seq1  ACTTTGCTTTTCCTTTGCTAAGTAAATTTCTATTTATAACGTCTGTGTCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGCTTTTCCTTTGCTAAGTAAATTTCTATTTATAACGTCTGTGTCT  944

seq1  CCCAACTGAATTC  960
      |||||||||||||
seq2  CCCAACTGAATTC  957