BAC Information

Click to search

BAC

Clone NameB6Ng01-141M24
Chromosome10 (Build37)
Map Location 119,404,246 - 119,492,887
singlet/doubletdoublet
Overlap geneGrip1
Upstream geneLOC100042861, LOC674417, Cand1
Downstream geneHelb, Irak3, Tmbim4, 1190005P17Rik, Hmga2, LOC100042902, Msrb3, LOC100043488, Lemd3, Wif1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141M24.bB6Ng01-141M24.g
ACCDH940170DH940171
length8391,075
definitionDH940170|Mus musculus domesticus DNA, BAC clone: B6Ng01-141M24, 5' end.DH940171|Mus musculus domesticus DNA, BAC clone: B6Ng01-141M24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,404,246 - 119,405,096)(119,491,808 - 119,492,887)
sequence
gaattctttgcacagactttgaagttaaaagtccctccttctcatttgtg
ctctgcgttcatgggtacccatggttgcaagaatagccatcaaagagttt
caggtatggattaccatgatgcccaatacaaatcctgtatcattaggacc
actggccctgtgcctaaagtaagtcatgactattcattccttagctcatt
tcactgatatataagtgagcacccatcatgtatgagcttgccttgtaaac
actgtagagttactagcatgaatggaaaatagaaattcccaagctacgtg
tatgaattaaaaataggaattccagacgttatggagtcattaattagcag
caacttagaaaacaactgttgaatatcatatatttaaaagcattgcaaaa
caaaaccatatggctccattagagtgtgtcacgggcgggttggcatgcag
gttctggcaggaatccctgtagatgttgcattagagcagaacagggaaaa
gacagaccagctgagggttggaatagcctaggtggtgagaagaacgtata
cgattgtgaagtaggcacatgacagttctgaagaagtgaaagagaagaca
ggtcctggaagatagaggacaagattagcatggtggaaaatgaagctgaa
gtcacagcagcatccagatcacacaggtcacatgggcagtagatcttttt
tccccaagaaagttgtaagtaagggctaaaataaaggttcatctttcaaa
gattactttgattggaggtaatcttgagaagattctggatataagatggg
gccaccttgaactaaaaaggtgtcttagtattggtttga
gaattctgtgagtagattattaatgacagggagggtcttgttttctatga
aaagtgaggttagggctgttacttttttataatcctcatatgtttttttt
ttttaaaaagcctgaagtaccattctagctgactaaacctccctatcact
gctcatgttggcctgggacctgccatagttgtcatacctatataggtctc
acttaaacgccgtgggtggctcggaagtgtggtgaagtgtgagagcaagt
ttgctctgtggacaatactgtagtctaacatggagcataaccagagttca
ttctgccctggccccagaaatctaacgttttgaggagagtttcctgccta
tggtagggatataattgaatagtaagtctgtttttcaatgagctttaagc
ctcttgtcagtgaagcgatggacaaaagatgtctgggaaatccttccccc
tgtcaacgagaatagactcattcatcaaggctccacgtaacattggactc
tcacatttttttttttttgtaagatttggaccacttttttgataaacaca
ttgcctgaaaatcaattttccctgctttccaggctaattcttccagggga
catgttttaagacattaagtctctgaagctttgcctttcaactgtgggtt
ttctcttctgctgagcccacaggagaagtcacagctgagcctgcaccaat
gcatcaccgtcatgcagaacggctgctacgttagacacccgggaaaggag
gaagaggtctactgaccttgtgtagctccaccggagttggggacatgatc
tcctttatttcttgcttcatttttccgcagggttacagactttctgccca
cgtctggagggcagggtgttgctgcgagttgtttggctattgtgtggccg
tgaactgcctccgttcctggaagctggcctgtcgctccagctgactggga
ggcaattgagcctcatgattcaaactcatagtacttcccggacatgattg
tgctggcgcatcgacatttcgaatcgattaacccccgggtaaggaagttt
gcttgctcaacatagcgtaactctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_119404246_119405096
seq2: B6Ng01-141M24.b_48_886

seq1  GAATTCTTTGCACAGACTTTGAAGTTAAAAGTCCCTCCTTCTCATTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCACAGACTTTGAAGTTAAAAGTCCCTCCTTCTCATTTGTG  50

seq1  CTCTGCGTTCATGGGTACCCATGGTTGCAAGAATAGCCATCAAAGAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCGTTCATGGGTACCCATGGTTGCAAGAATAGCCATCAAAGAGTTT  100

seq1  CAGGTATGGATTACCATGATGCCCAATACAAATCCTGTATCATTAGGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTATGGATTACCATGATGCCCAATACAAATCCTGTATCATTAGGACC  150

seq1  ACTGGCCCTGTGCCTAAAGTAAGTCATGACTATTCATTCCTTAGCTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCCTGTGCCTAAAGTAAGTCATGACTATTCATTCCTTAGCTCATT  200

seq1  TCACTGATATATAAGTGAGCACCCATCATGTATGAGCTTGCCTTGTAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGATATATAAGTGAGCACCCATCATGTATGAGCTTGCCTTGTAAAC  250

seq1  ACTGTAGAGTTACTAGCATGAATGGAAAATAGAAATTCCCAAGCTACGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGAGTTACTAGCATGAATGGAAAATAGAAATTCCCAAGCTACGTG  300

seq1  TATGAATTAAAAATAGGAATTCCAGACGTTATGGAGTCATTAATTAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATTAAAAATAGGAATTCCAGACGTTATGGAGTCATTAATTAGCAG  350

seq1  CAACTTAGAAAACAACTGTTGAATATCATATATTTAAAAGCATTGCAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTAGAAAACAACTGTTGAATATCATATATTTAAAAGCATTGCAAAA  400

seq1  CAAAACCATATGGCTCCATTAGAGTGTGTCACGGGCGGGTTGGCATGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCATATGGCTCCATTAGAGTGTGTCACGGGCGGGTTGGCATGCAG  450

seq1  GTTCTGGCAGGAATCCCTGTAGATGTTGCATTAGAGCAGAACAGGG-AAA  499
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTTCTGGCAGGAATCCCTGTAGATGTTGCATTAGAGCAGAACAGGGAAAA  500

seq1  GACAGACCAGCTGAGGGTTGGAATAGCCTAGGTGGTGAGAAGAACGTATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACCAGCTGAGGGTTGGAATAGCCTAGGTGGTGAGAAGAACGTATA  550

seq1  CGATTGTGAAGTAGGCACATGACAGTTCTGAAGAAGTGAAAGAGAAGACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTGTGAAGTAGGCACATGACAGTTCTGAAGAAGTGAAAGAGAAGACA  600

seq1  GGTCCTGGAAGATAGAGAACAAGATTAGCATGGTGGAAAATGAAGCTGAA  649
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGTCCTGGAAGATAGAGGACAAGATTAGCATGGTGGAAAATGAAGCTGAA  650

seq1  GCCACAAGCAGCATCCAGATCACACAGGTCCACATGGGCAGTAAGATCTT  699
      | ||| ||||||||||||||||||||||| |||||||||||| |||||||
seq2  GTCAC-AGCAGCATCCAGATCACACAGGT-CACATGGGCAGT-AGATCTT  697

seq1  TTTCCCCCAAAGAAAGGTTGTAGGTAAGGGGCTAAAATAAGAGTTCATCT  749
      ||| |||| |||||| |||||| |||| ||||||||||||  ||||||||
seq2  TTTTCCCC-AAGAAA-GTTGTAAGTAA-GGGCTAAAATAAAGGTTCATCT  744

seq1  TCAAAAGATTACTTTGAATTGGGAAGGGGAAAATCCTGAGAGGATTCTGG  799
      |  ||||||||||||| |||||  |||    |||| ||||| |||||| |
seq2  TTCAAAGATTACTTTG-ATTGG--AGG---TAATCTTGAGAAGATTCT-G  787

seq1  GATATAAGATGGTGGCAACTTGAACTAAAAAGGTGTCTTAGTTATTGTTT  849
      |||||||||||| | || ||||||||||||||||||||||||  | ||||
seq2  GATATAAGATGGGGCCACCTTGAACTAAAAAGGTGTCTTAGTATTGGTTT  837

seq1  GA  851
      ||
seq2  GA  839

seq1: chr10_119491808_119492887
seq2: B6Ng01-141M24.g_69_1143 (reverse)

seq1  GAGAGTTACGCTTAATGTTGAGCAAGCAAACCCTTCCCTTACCCGTGGTT  50
      ||||||||||||  |||||||||||||||||   | ||||||||| || |
seq2  GAGAGTTACGCT--ATGTTGAGCAAGCAAAC---TTCCTTACCCGGGGGT  45

seq1  TAATCGTTTCTGAAAATTGTCGATGCCGCAGGCAACAATCATGT-CGGGG  99
      |||||| ||| ||||  |||||||||  |||   |||||||||| |||| 
seq2  TAATCGATTC-GAAA--TGTCGATGCGCCAG--CACAATCATGTCCGGGA  90

seq1  AGTACTATGAGTTTGAATCATGAGGCTCCAATGGCTCGCAGTCAGCTGGG  149
      |||||||||||||||||||||||||||| | || ||| ||||||||||| 
seq2  AGTACTATGAGTTTGAATCATGAGGCTCAATTGCCTCCCAGTCAGCTGGA  140

seq1  GCGACAGGCCAGCTTCCAGGAACGGA-GCAGTTCACGGCCACACTATAGC  198
      |||||||||||||||||||||||||| ||||||||||||||||| |||||
seq2  GCGACAGGCCAGCTTCCAGGAACGGAGGCAGTTCACGGCCACACAATAGC  190

seq1  CAAACAACTCGCAGCAACACCCTGCCCT-CAGACGTGGGCAGAAAGTCTG  247
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CAAACAACTCGCAGCAACACCCTGCCCTCCAGACGTGGGCAGAAAGTCTG  240

seq1  TAACCCTGCGG-AAAATGAAGCAAGAAATAAAGGAGATCATGTCCCCAAC  296
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTGCGGAAAAATGAAGCAAGAAATAAAGGAGATCATGTCCCCAAC  290

seq1  TCCGGTGGAGCTACACAAGGTCAGTAGACCTCTTCCTCC-TTCCCGGGTG  345
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCCGGTGGAGCTACACAAGGTCAGTAGACCTCTTCCTCCTTTCCCGGGTG  340

seq1  TCTAACGTAGCAGCCGTTCTGCATGACGGTGATGCATTGGTGCAGGCTCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACGTAGCAGCCGTTCTGCATGACGGTGATGCATTGGTGCAGGCTCA  390

seq1  GCTGTGACTTCTCCTGTGGGCTCAGCAGAAGAGAAAACCCACAGTTGAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGACTTCTCCTGTGGGCTCAGCAGAAGAGAAAACCCACAGTTGAAA  440

seq1  GGCAAAGCTTCAGAGACTTAATGTCTTAAAACATGTCCCCTGGAAGAATT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGCTTCAGAGACTTAATGTCTTAAAACATGTCCCCTGGAAGAATT  490

seq1  AGCCTGGAAAGCAGGGAAAATTGATTTTCAGGCAATGTGTTTATCAAAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGAAAGCAGGGAAAATTGATTTTCAGGCAATGTGTTTATCAAAAA  540

seq1  AGTGGTCCAAATCTTACAAAAAAAAAAAAATGTGAGAGTCCAATGTTACG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCCAAATCTTACAAAAAAAAAAAAATGTGAGAGTCCAATGTTACG  590

seq1  TGGAGCCTTGATGAATGAGTCTATTCTCGTTGACAGGGGGAAGGATTTCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCCTTGATGAATGAGTCTATTCTCGTTGACAGGGGGAAGGATTTCC  640

seq1  CAGACATCTTTTGTCCATCGCTTCACTGACAAGAGGCTTAAAGCTCATTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATCTTTTGTCCATCGCTTCACTGACAAGAGGCTTAAAGCTCATTG  690

seq1  AAAAACAGACTTACTATTCAATTATATCCCTACCATAGGCAGGAAACTCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGACTTACTATTCAATTATATCCCTACCATAGGCAGGAAACTCT  740

seq1  CCTCAAAACGTTAGATTTCTGGGGCCAGGGCAGAATGAACTCTGGTTATG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAACGTTAGATTTCTGGGGCCAGGGCAGAATGAACTCTGGTTATG  790

seq1  CTCCATGTTAGACTACAGTATTGTCCACAGAGCAAACTTGCTCTCACACT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGTTAGACTACAGTATTGTCCACAGAGCAAACTTGCTCTCACACT  840

seq1  TCACCACACTTCCGAGCCACCCACGGCGTTTAAGTGAGACCTATATAGGT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACACTTCCGAGCCACCCACGGCGTTTAAGTGAGACCTATATAGGT  890

seq1  ATGACAACTATGGCAGGTCCCAGGCCAACATGAGCAGTGATAGGGAGGTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAACTATGGCAGGTCCCAGGCCAACATGAGCAGTGATAGGGAGGTT  940

seq1  TAGTCAGCTAGAATGGTACTTCAGGCTTTTTAAAAAAAAAAAACATATGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAGCTAGAATGGTACTTCAGGCTTTTTAAAAAAAAAAAACATATGA  990

seq1  GGATTATAAAAAAGTAACAGCCCTAACCTCACTTTTCATAGAAAACAAGA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTATAAAAAAGTAACAGCCCTAACCTCACTTTTCATAGAAAACAAGA  1040

seq1  CCCTCCCTGTCATTAATAATCTACTCACAGAATTC  1080
      |||||||||||||||||||||||||||||||||||
seq2  CCCTCCCTGTCATTAATAATCTACTCACAGAATTC  1075