BAC Information

Click to search

BAC

Clone NameB6Ng01-143F14
Chromosome10 (Build37)
Map Location 91,441,687 - 91,621,772
singlet/doubletdoublet
Overlap geneLOC100041799
Upstream geneApaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream geneLOC667203, LOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143F14.bB6Ng01-143F14.g
ACCDH941309DH941310
length1,114928
definitionDH941309|Mus musculus domesticus DNA, BAC clone: B6Ng01-143F14, 5' end.DH941310|Mus musculus domesticus DNA, BAC clone: B6Ng01-143F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,620,654 - 91,621,772)(91,441,687 - 91,442,615)
sequence
gaattcaatttactagaaattcgaaacgtggaaatcagacatatttttta
atacccttctgtaatgaatttagcaagtatttgtaccttcagaaaaattc
ttgagtgtcaaaaatgtgttcatgtgtcactcctgattaagttttcaaca
atatctatctggtcttgataggtttaaagaacttagtagatatacattta
tcatcttggaacatatttctcttgctgatgttctaaaatggtttagacgt
atcacacacacacacacacacacacacacacacacacacacacacaccag
tttaaaagaatacttagatatgtcagtcagcacacacttcaagtcgtcat
cttactgatgtatattttaactctatgcaagtgcaccccttctcgccgac
attcagatctgtgatacagcacacactaaatagcttcctcttccttccct
ctttcaatgcttcttacactctgttgagagcgtgcattataatctactac
ttaaagaaattctaattcttgttattaatgcctcacacctatttgttcca
agcccctttcttccatgttctaatcttcttcattactttgtaagaaagga
attgccacactctgatttgcagatgaggagaaggaggttttgagaagttt
agtagcctcccccaaggtcacaaagctaataatcagctgtgagaacttaa
agctcaagttcttcaggttctattaatttttctagtcattcaacaaatat
caccgagcccttgtgatatcttagacttgttcaagacactcaaaataaag
gcatagatacagcaggcattaaaccccttggagtccattgcctcagtgtc
tgcttatggagtgttcatctcatagtcaccttaacactatgctgatattt
cctcaacatcccttggagccaaaagaacacaatttataaagtttcaaccc
tttttagaatctctcctctgtaccttcagtcctttccaactgcataattg
cctgttcctaagcagggattctaacactggaaaaaccaatcttcttgtgg
cccggcaaagcttgtcttgcatttgctctgatatcctgtaccaaaacatt
ttctgtgtctttca
tgaccactgttttaatagtgtgactataatgagtagtcagagttctatgt
atcttctgctgcatgcctgtcctccttcctcctctctcctctttcctctt
cctgcccctctccttcccagtcattctgtctgtctctctctttctctgtc
tgtctctctctgtctctttgtctctatctctctctgtctctctctgaaaa
gtgttcatatttctgcatctatttaaactgggttttaaccagctggagat
ttgtcagtaaatggggtcataataaacccagcactccagacgttcctgga
gttgaagtagcaatttcaccgccattctttccatcagaagcaatctcctg
taagcctttttgatgagttttgtgaaaacaaaatccgtgtggactagaat
ttctcaaacttagtttcaggttaaaattaaagataaacatttactgatag
ttgatgtggtgggggaaaaagttttaaagaaaaatccttgcaaagtcttc
cataactggagataatcagcatggctcctgaaattcaagctttttatgca
taaatccccctgaattccactgttgtgatctacccgacaaaatttaactc
cagagtacaatttaagcaatccagttggtgagccggttcaaacttgagca
aatctagtttgccaattatatggcagtgtcatacacagtggataaggtat
ccagttaagaaatggaataccagtcaactctgtgggtactcatcatccca
gtggagaggaacaaggagggtcactatactcactgttcatctctctttgt
cttagtagacttgcctgcaagggacggggcttctttactgctcttgtaga
tatgggtatggaagaaacaggttgttggaagctaccctataccccagagg
gtatgtctgcttaacatgcaacctgcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91620654_91621772
seq2: B6Ng01-143F14.b_46_1159 (reverse)

seq1  TGAAAGGACACAGGAAAATTGTTTTGGGTACAGGGATAATCAGAGCAAAT  50
      ||||| |||||||  ||| |||||| |||||| |||| ||||||||||||
seq2  TGAAA-GACACAG--AAAATGTTTT-GGTACA-GGAT-ATCAGAGCAAAT  44

seq1  GCAAGACAAGCTTTGCTGGGGCCACAAGAAGATGGGTTTTTCCAGTG-TA  99
      ||||||||||||||||  ||||||||||||||| ||||||||||||| ||
seq2  GCAAGACAAGCTTTGC-CGGGCCACAAGAAGATTGGTTTTTCCAGTGTTA  93

seq1  GAATTCCTGCTTAGAAACAGGCAATTATGCAGTTGGAAAGGACTGAAGGT  149
      |||| ||||||||| |||||||||||||||||||||||||||||||||||
seq2  GAATCCCTGCTTAGGAACAGGCAATTATGCAGTTGGAAAGGACTGAAGGT  143

seq1  ACAGAGGAAGAGA-TCTAAAAAGGGTTGAAACTTTAT-AATTGTGTTCTT  197
      ||||||| ||||| ||||||||||||||||||||||| ||||||||||||
seq2  ACAGAGG-AGAGATTCTAAAAAGGGTTGAAACTTTATAAATTGTGTTCTT  192

seq1  TTGGCT-CAAGGGATGTTGAGGAAATATCAGCATAGTGTTAAGGTGACTA  246
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCCAAGGGATGTTGAGGAAATATCAGCATAGTGTTAAGGTGACTA  242

seq1  TGAGATGAATCACTCCATAGGCAGACACTGAGGCAATGGACTCCAAGGGG  296
      ||||||||| ||||||||| ||||||||||||||||||||||||||||||
seq2  TGAGATGAA-CACTCCATAAGCAGACACTGAGGCAATGGACTCCAAGGGG  291

seq1  TTTAATGCCTGCTGTATCTATGCCTTTATTTTGAGTGTCTTGAACAAGTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGCCTGCTGTATCTATGCCTTTATTTTGAGTGTCTTGAACAAGTC  341

seq1  TAAGATATCACAAGGGCTCGGTGATATTTGTTGAATGACTAGAAAAATTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATATCACAAGGGCTCGGTGATATTTGTTGAATGACTAGAAAAATTA  391

seq1  ATAGAACCTGAAGAACTTGAGCTTTAAGTTCTCACAGCTGATTATTAGCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACCTGAAGAACTTGAGCTTTAAGTTCTCACAGCTGATTATTAGCT  441

seq1  TTGTGACCTTGGGGGAGGCTACTAAACTTCTCAAAACCTCCTTCTCCTCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACCTTGGGGGAGGCTACTAAACTTCTCAAAACCTCCTTCTCCTCA  491

seq1  TCTGCAAATCAGAGTGTGGCAATTCCTTTCTTACAAAGTAATGAAGAAGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAATCAGAGTGTGGCAATTCCTTTCTTACAAAGTAATGAAGAAGA  541

seq1  TTAGAACATGGAAGAAAGGGGCTTGGAACAAATAGGTGTGAGGCATTAAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACATGGAAGAAAGGGGCTTGGAACAAATAGGTGTGAGGCATTAAT  591

seq1  AACAAGAATTAGAATTTCTTTAAGTAGTAGATTATAATGCACGCTCTCAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAATTAGAATTTCTTTAAGTAGTAGATTATAATGCACGCTCTCAA  641

seq1  CAGAGTGTAAGAAGCATTGAAAGAGGGAAGGAAGAGGAAGCTATTTAGTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGTAAGAAGCATTGAAAGAGGGAAGGAAGAGGAAGCTATTTAGTG  691

seq1  TGTGCTGTATCACAGATCTGAATGTCGGCGAGAAGGGGTGCACTTGCATA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGTATCACAGATCTGAATGTCGGCGAGAAGGGGTGCACTTGCATA  741

seq1  GAGTTAAAATATACATCAGTAAGATGACGACTTGAAGTGTGTGCTGACTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAAAATATACATCAGTAAGATGACGACTTGAAGTGTGTGCTGACTG  791

seq1  ACATATCTAAGTATTCTTTTAAACTGGTGTGTGTGTGTGTGTGTGTGTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCTAAGTATTCTTTTAAACTGGTGTGTGTGTGTGTGTGTGTGTGT  841

seq1  GTGTGTGTGTGTGTGTGTGTGATACGTCTAAACCATTTTAGAACATCAGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGATACGTCTAAACCATTTTAGAACATCAGC  891

seq1  AAGAGAAATATGTTCCAAGATGATAAATGTATATCTACTAAGTTCTTTAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAATATGTTCCAAGATGATAAATGTATATCTACTAAGTTCTTTAA  941

seq1  ACCTATCAAGACCAGATAGATATTGTTGAAAACTTAATCAGGAGTGACAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATCAAGACCAGATAGATATTGTTGAAAACTTAATCAGGAGTGACAC  991

seq1  ATGAACACATTTTTGACACTCAAGAATTTTTCTGAAGGTACAAATACTTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACACATTTTTGACACTCAAGAATTTTTCTGAAGGTACAAATACTTG  1041

seq1  CTAAATTCATTACAGAAGGGTATTAAAAAATATGTCTGATTTCCACGTTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTCATTACAGAAGGGTATTAAAAAATATGTCTGATTTCCACGTTT  1091

seq1  CGAATTTCTAGTAAATTGAATTC  1119
      |||||||||||||||||||||||
seq2  CGAATTTCTAGTAAATTGAATTC  1114

seq1: chr10_91441687_91442615
seq2: B6Ng01-143F14.g_83_1010

seq1  TGACCACTGTTTTAATAGTGTGACTATAATGAGTAGTCAGAGTTCTATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACTGTTTTAATAGTGTGACTATAATGAGTAGTCAGAGTTCTATGT  50

seq1  ATCTTCTGCTGCATGCCTGTCCTCCTTCCTCCTCTCTCCTCTTTCCTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTGCTGCATGCCTGTCCTCCTTCCTCCTCTCTCCTCTTTCCTCTT  100

seq1  CCTGCCCCTCTCCTTCCCAGTCATTCTGTCTGTCTCTCTCTTTCTCTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCCTCTCCTTCCCAGTCATTCTGTCTGTCTCTCTCTTTCTCTGTC  150

seq1  TGTCTCTCTCTGTCTCTTTGTCTCTATCTCTCTCTGTCTCTCTCTGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTCTCTGTCTCTTTGTCTCTATCTCTCTCTGTCTCTCTCTGAAAA  200

seq1  GTGTTCATATTTCTGCATCTATTTAAACTGGGTTTTAACCAGCTGGAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCATATTTCTGCATCTATTTAAACTGGGTTTTAACCAGCTGGAGAT  250

seq1  TTGTCAGTAAATGGGGTCATAATAAACCCAGCACTCCAGACGTTCCTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGTAAATGGGGTCATAATAAACCCAGCACTCCAGACGTTCCTGGA  300

seq1  GTTGAAGTAGCAATTTCACCGCCATTCTTTCCATCAGAAGCAATCTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAGTAGCAATTTCACCGCCATTCTTTCCATCAGAAGCAATCTCCTG  350

seq1  TAAGCCTTTTTGATGAGTTTTGTGAAAACAAAATCCGTGTGGACTAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTTTTTGATGAGTTTTGTGAAAACAAAATCCGTGTGGACTAGAAT  400

seq1  TTCTCAAACTTAGTTTCAGGTTAAAATTAAAGATAAACATTTACTGATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAACTTAGTTTCAGGTTAAAATTAAAGATAAACATTTACTGATAG  450

seq1  TTGATGTGGTGGGGGAAAAAGTTTTAAAGAAAAATCCTTGCAAAGTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTGGTGGGGGAAAAAGTTTTAAAGAAAAATCCTTGCAAAGTCTTC  500

seq1  CATAACTGGAGATAATCAGCATGGCTCCTGAAATTCAAGCTTTTTATGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTGGAGATAATCAGCATGGCTCCTGAAATTCAAGCTTTTTATGCA  550

seq1  TAAATCCCCCTGAATTCCACTGTTGTGATCTACCCGACAAAATTTAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCCCCTGAATTCCACTGTTGTGATCTACCCGACAAAATTTAACTC  600

seq1  CAGAGTACAATTTAAGCAATCCAGTTGGTGAGCCGGTTCAAACTTGAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTACAATTTAAGCAATCCAGTTGGTGAGCCGGTTCAAACTTGAGCA  650

seq1  AATCTAGTTTGCCAATTATATGGCAGGTGTCATACACAGTGGATAAGGTA  700
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AATCTAGTTTGCCAATTATATGGCA-GTGTCATACACAGTGGATAAGGTA  699

seq1  TCCAGTTAAGAAATGGAATACCAGTCAACTCTGTTGGTACTCATCATCCC  750
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCCAGTTAAGAAATGGAATACCAGTCAACTCTGTGGGTACTCATCATCCC  749

seq1  AGTGGAGAGGAACAAGGAGGGTCACTATACTCACTGTTCATCTCTCTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGAGGAACAAGGAGGGTCACTATACTCACTGTTCATCTCTCTTTG  799

seq1  TCTTAGTAGACTTGCCTGCAAGGGACGGGGCTTCTTTACTGCTCTTGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTAGACTTGCCTGCAAGGGACGGGGCTTCTTTACTGCTCTTGTAG  849

seq1  ATATGGGTATGGAAGAGACAGGTTGTTGG-AGCTACACTATACCCCAGTA  899
      |||||||||||||||| |||||||||||| |||||| |||||||||||  
seq2  ATATGGGTATGGAAGAAACAGGTTGTTGGAAGCTACCCTATACCCCAGAG  899

seq1  GGTATGTCTGCTTAACACTGCAACTTGCCA  929
      ||||||||||||||||| |||||| |||||
seq2  GGTATGTCTGCTTAACA-TGCAACCTGCCA  928