BAC Information

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BAC

Clone NameB6Ng01-145I12
Chromosome10 (Build37)15 (Build37)
Map Location 104,053,903 - 104,054,36343,966,355 - 43,967,372
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145I12.bB6Ng01-145I12.g
ACCDH942911DH942912
length9981,019
definitionDH942911|Mus musculus domesticus DNA, BAC clone: B6Ng01-145I12, 5' end.DH942912|Mus musculus domesticus DNA, BAC clone: B6Ng01-145I12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(43,966,355 - 43,967,372)
sequence
gaattctcacctgaggaatactgaatggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcatatcaaaacaaccgtgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatcctggggaggatgtggaaaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacagccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatcccacaatacctctcctaggc
atatatccagaagatgttccaaccggtaagaaggacacatgctccactaa
gttcatagcagccttatttataatagccagaagctggaaagaacccagag
cccctcaacagaggaatggatatagaatatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacccattcacaaaa
gaactcacatgatatgtactcaccgataagtggatattagccagaaactt
agtataacgtgatacaagatataatttgcaaaacacatgaaactgaagaa
gaacgaagaccaaagtgtggatactttgcctcttcttagaattgggaaca
aaacacccatggaaggagttacagagacaaaatttggagctgagaggaaa
gaatggaccatctagagactgccatatccagggatccatcccataatcag
cctctaaacgctgacaccattgcatacactagcaagattttgcttaaagg
accctgatatagctgtctcttgtgagactatgccggggcctagcaaacac
agaagtggatgctcacagtcagctattggatgggtcacacggccccaatg
gaggagctagagaaagtacccaagagctggggggatctgcaaccctat
gaattcaaatggatttaagcaatgaaaaaaatcaaaataaccctttaatt
ttataaaagttttggctaaaagtagacaagggaccaggcaatgatagaca
gaccaagaggtgacgtagggccagatctaagccactgctgctactatgag
ctgaggtaactagagtgagttcaacttctagaatatgaaaaagcagacac
tcaggtttgggaaaatgccaaaatgatgggctctgtgttaaaggcagaga
accttggaggtctgcatagaaacaagactagacaaatgaggagggcacaa
gcaactcctagagcttgcattcagccttcttgccctttgcctgtgtgact
ggaacagatacatcatgcttgcctttcctcctgtagtgctcacaggtccc
aggacccacagcatgccctttgctctgcatctgcagtggattgattctgt
atttctcatagccctgccaccacccagccattcctggaatggactttctt
ccttctcaatatgttttattactgtgaggtacacctttcaggtgttttgt
aattaaaacaacaacaaaccaaatcaatcaaacaaaaagaaacctcacga
tgatagtaaagaatttgcatagaaatttatccttcttagtagtgttaata
tctaacatgaacatggtacatttgctacaattaacaagacaatactgggg
tatttacatgatttatttggaatttatattcatgaattctttgtctcatt
actttctatttattcaatcattttcaacagcataggctgatttttatgtt
tagcatagggatctaatatgattttattattgtacaaatcattgctatgt
ttcataataaatataaaaatgtgtattattactctcacgttttactgaac
agaatccacagaggttgaagtcttcttccagtttccatttgagagtcaga
tggggattttggaatatgaagacatagtgggacttctccatccatgccca
ctcaaaacctggtacttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-145I12.b_50_519 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||||||||||||||||||| |||| ||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATATTCTATA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || |||||||||||||||||| |||||||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGC-TCTGGGTTCTTTCCAGCTTCTGGCTATT  99

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  ATAAATAAGGCTGCTATGAACTTAGTGGAGCATGTGTCCTTCTTACCGGT  149

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||  ||||||||||||||||||| || ||||||||||  ||||||||||
seq2  TGGAACATCTTCTGGATATATGCCTAGGAGAGGTATTGTGGGATCCTCCG  199

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| |||| ||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGT  249

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      || ||||||||| |||||||||||||||||||||||||||||||||||| 
seq2  GGCTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTT  299

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||| |||| |||||||||||||||||||||||||||||||||
seq2  TCCACATCCTCCCCAGGATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  349

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      ||||||||||||||||||||||||||| |||||||||||| |||||||||
seq2  TTCTGACTGGTGTGAGGTGGAATCTCACGGTTGTTTTGATATGCATTTCC  399

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||||||||||||||||||||| ||||| ||||||| 
seq2  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGTTTCTCAGCCATTCA  449

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  470

seq1: chr15_43966355_43967372
seq2: B6Ng01-145I12.g_67_1085 (reverse)

seq1  CCAAGTACCAGGTTTTGAGTGGGCATGGATGGAGAAGTCACACTATGTCT  50
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCAAGTACCAGGTTTTGAGTGGGCATGGATGGAGAAGTCCCACTATGTCT  50

seq1  CAATAT--CAAAATCCCCATTCTGACTCTCAAATGGAAACTGGAAGAAGA  98
        ||||  ||||||||||| ||||||||||||||||||||||||||||||
seq2  TCATATTCCAAAATCCCCA-TCTGACTCTCAAATGGAAACTGGAAGAAGA  99

seq1  C-TCAACCTCTGTGGATTCTGTTCAGTAAAACGTGTAGAGTAATATTACA  147
      | ||||||||||||||||||||||||||||||||| ||||||||| ||||
seq2  CTTCAACCTCTGTGGATTCTGTTCAGTAAAACGTG-AGAGTAATAATACA  148

seq1  CAATTTTTATATTTATTATGAAACATAGCAATGATTTGTACAATAATAAA  197
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-ATTTTTATATTTATTATGAAACATAGCAATGATTTGTACAATAATAAA  197

seq1  ATCATATTAGATCCCTATGCTAAACATAAAAATCAGCCTATGCTGTTGAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATTAGATCCCTATGCTAAACATAAAAATCAGCCTATGCTGTTGAA  247

seq1  AATGATTGAATAAATAGAAAGTAATGAGACAAAGAATTCATGAATATAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTGAATAAATAGAAAGTAATGAGACAAAGAATTCATGAATATAAA  297

seq1  TTCCAAATAAATCATGTAAATA-CCCAGTATTGTCTTGTTAATTGTAGCA  346
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTCCAAATAAATCATGTAAATACCCCAGTATTGTCTTGTTAATTGTAGCA  347

seq1  AATGTACCATGTTCATGTTAGATATTAACACTACTAAGAAGGATAAATTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACCATGTTCATGTTAGATATTAACACTACTAAGAAGGATAAATTT  397

seq1  CTATGCAAATTCTTTACTATCATCGTGAGGTTTCTTTTTGTTTGATTGAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCAAATTCTTTACTATCATCGTGAGGTTTCTTTTTGTTTGATTGAT  447

seq1  TTGGTTTGTTGTTGTTTTAATTACAAAACACCTGAAAGGTGTACCTCACA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTGTTGTTGTTTTAATTACAAAACACCTGAAAGGTGTACCTCACA  497

seq1  GTAATAAAACATATTGAGAAGGAAGAAAGTCCATTCCAGGAATGGCTGGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAAAACATATTGAGAAGGAAGAAAGTCCATTCCAGGAATGGCTGGG  547

seq1  TGGTGGCAGGGCTATGAGAAATACAGAATCAATCCACTGCAGATGCAGAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCAGGGCTATGAGAAATACAGAATCAATCCACTGCAGATGCAGAG  597

seq1  CAAAGGGCATGCTGTGGGTCCTGGGACCTGTGAGCACTACAGGAGGAAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGCATGCTGTGGGTCCTGGGACCTGTGAGCACTACAGGAGGAAAG  647

seq1  GCAAGCATGATGTATCTGTTCCAGTCACACAGGCAAAGGGCAAGAAGGCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCATGATGTATCTGTTCCAGTCACACAGGCAAAGGGCAAGAAGGCT  697

seq1  GAATGCAAGCTCTAGGAGTTGCTTGTGCCCTCCTCATTTGTCTAGTCTTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCAAGCTCTAGGAGTTGCTTGTGCCCTCCTCATTTGTCTAGTCTTG  747

seq1  TTTCTATGCAGACCTCCAAGGTTCTCTGCCTTTAACACAGAGCCCATCAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATGCAGACCTCCAAGGTTCTCTGCCTTTAACACAGAGCCCATCAT  797

seq1  TTTGGCATTTTCCCAAACCTGAGTGTCTGCTTTTTCATATTCTAGAAGTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCATTTTCCCAAACCTGAGTGTCTGCTTTTTCATATTCTAGAAGTT  847

seq1  GAACTCACTCTAGTTACCTCAGCTCATAGTAGCAGCAGTGGCTTAGATCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCACTCTAGTTACCTCAGCTCATAGTAGCAGCAGTGGCTTAGATCT  897

seq1  GGCCCTACGTCACCTCTTGGTCTGTCTATCATTGCCTGGTCCCTTGTCTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTACGTCACCTCTTGGTCTGTCTATCATTGCCTGGTCCCTTGTCTA  947

seq1  CTTTTAGCCAAAACTTTTATAAAATTAAAGGGTTATTTTGATTTTTTTCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGCCAAAACTTTTATAAAATTAAAGGGTTATTTTGATTTTTTTCA  997

seq1  TTGCTTAAATCCATTTGAATTC  1018
      ||||||||||||||||||||||
seq2  TTGCTTAAATCCATTTGAATTC  1019