BAC Information

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BAC

Clone NameB6Ng01-147B02
Chromosome10 (Build37)
Map Location 52,065,575 - 52,065,895
singlet/doubletsinglet
Overlap geneGopc
Upstream geneLOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik, Vgll2, Ros1, Dcbld1, LOC625811
Downstream geneEG668294, Nepn, D10Ertd438e, EG629689, Zfa, Slc35f1, Pln
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147B02.bB6Ng01-147B02.g
ACCDH944048DH944049
length1,154326
definitionDH944048|Mus musculus domesticus DNA, BAC clone: B6Ng01-147B02, 5' end.DH944049|Mus musculus domesticus DNA, BAC clone: B6Ng01-147B02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctagtcccatacctaaacatagtaaaatcaatatacagcaaacca
gtagccaacatcaaactaaatggagagaaacttgaagcaatcccactaaa
atcagggattagacaaggctgcccactctctccctacctattcaatatag
tacttaaagtcctagccagagcaattagacaacaaaaggagatcaaaagg
ataccaattggaaaggaagaagtcaaaatatcactatttgcagatgatat
aatatgataaagaccccaaaaattccaccagagaactcctaaacctaata
aacaacttcagtgaagtagctggatataaaattaactcaaacaaatcagt
ggcctttctcttctcaaaggacaaacaggctgggaaagatattagggaaa
caacacctttcacaatcgtcacaaataatataaaataccttggtgtgact
ctaattaagcaaatgaaagatctatattacaagaacttcaagtctctgaa
gaaagaaatcaaagatctcagaagatggaaagatctcccatgctcatgga
ttggcaggattaatatttttttaaatggccatcttgccaaaagcaatcta
cagattcaatgcaacctttatcaacattccaactcaattcttcatagagt
tagaaagagaaatttgcaaattcatctggaataacaaaaacctaggatag
agaaaactattctcaacaataaaaagaaatcgaacttctggtgaaatcac
catgcctgacctcatgctgtactacagagaaattgtgatttaaaaaaata
ttgcatggtattggtacagtgacaggcagatagaccaatggaatagaatt
tgaagacccagaaatgaacccacacacctatggtcacttgaaggagctaa
aaccatccagtagaaaagagacagcattttcaaaaatagtgctggttcaa
caggcagttagcgtgtagaagaatgcaaattggcccattctatcctcctg
tacaagttcagtctcagtgggtcaagactccaaataaaacagagacaccg
aaactaatagagagaagtgggaaaaactcgatgaactggttacagtgaat
ttcctgaacagaaacccaataactatgcttagaattagaaactgaacaaa
tgtg
tggttttagttgcaagacagcagtggcgagatgaaaatgttacaaggtaa
aaatcattcagttttattatgaatgtgttggttattaataacatttcttc
ttttggttattagagacagggcccaggatggccttgaacttggagatttg
cctgcctctgctgcctaagtgctgagattaaagttgtgtacagttgctgc
caccacctggcttactatgaatacaattttaatgtaaaagcctcagtgtt
cttcagtaacatgctaaatgatacagaacaaaaggcatgaatagtcagtc
ttgcagttttactgtgttccactagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_52065575_52065895
seq2: B6Ng01-147B02.g_83_402 (reverse)

seq1  ACTAGTGGAACACAGTAAAACTGCAAGACTGACTATTCATGCCTTTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGGAACACAGTAAAACTGCAAGACTGACTATTCATGCCTTTTGTT  50

seq1  CTGTATCATTTAGCATGTTACTGAAGAACACTGAGGCTTTTACATTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATCATTTAGCATGTTACTGAAGAACACTGAGGCTTTTACATTAAAA  100

seq1  TTGTATTCATAGTAAGCCAGGTGGTGGCAGCAACTGTACACAACTTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTCATAGTAAGCCAGGTGGTGGCAGCAACTGTACACAACTTTAAT  150

seq1  CTCAGCACTTAGGCAGCAGAGGCAGGCAAATCTCCAAGTTCAAGGCCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCACTTAGGCAGCAGAGGCAGGCAAATCTCCAAGTTCAAGGCCATC  200

seq1  CTGGGCCCTGTCTCTAATAACCAAAAGAAGAAATGTTATTAATAACCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCCTGTCTCTAATAACCAAAAGAAGAAATGTTATTAATAACCAAC  250

seq1  ACATTCATAATAAAACTGAATGATTTTTACCTTGTAACATTTTCATCTCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCATAATAAAACTGAATGATTTTTACCTTGTAACATTTTCATCTCG  300

seq1  CCACTGCTGTCTTTGCAACTA  321
      ||||||||||| |||||||||
seq2  CCACTGCTGTC-TTGCAACTA  320