BAC Information

Click to search

BAC

Clone NameB6Ng01-147H17
Chromosome10 (Build37)
Map Location 110,688,622 - 110,689,550
singlet/doubletsinglet
Overlap geneOsbpl8
Upstream geneLOC100042506, LOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17, EG432502, LOC667904
Downstream geneBbs10, Nap1l1, EG382421, Phlda1, Krr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147H17.bB6Ng01-147H17.g
ACCDH944352DH944353
length1,083929
definitionDH944352|Mus musculus domesticus DNA, BAC clone: B6Ng01-147H17, 5' end.DH944353|Mus musculus domesticus DNA, BAC clone: B6Ng01-147H17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggacagccagggctatacagagaaaccctgtctcaacaaacc
aaaacaaaacaaaaaccaggcaagtttattatcctgtggctctggagctc
aaaaatccaaatgatatcactgggatgatccaattgaggtgtgagcaggg
ctgtattcctttctgaaagttctcggagaacattttgttttgttttcttg
tttttcttcatccggcttgtggaggcagtttctatttgttcaaatgtgat
cccctccatcctcaaagccagcactggctggctgagtcttgcaccaccag
ctcctctctatctttatcctccatgtaaaagcttgtgactccacagggaa
atatctaaatttcaagtgaagctgattagccaccttgttttccctttgcc
aagtgactaaatagacatataggttccacggactgagcattgggaaagct
ccttccaggatccactaatctaatgaaagacccacaacatgaggactcct
ccacattctgactcaggagaggtgacaccccaaatcactcacgagaaact
gtcttgatgcaaaccgcaagaggacccacactcatacaccatgcaggggt
agaggaccatggtgccccaagtagctggttaaggggatatttaaaggaaa
aaaaccaaaactcaagggagtggggagggcattgttgggaaataccaaaa
ataccagttaagagccacgaggaagtgcaaagtcacaagagtcacaagga
atacctggtaattgtgcaggttatttctcaagacagtttctatgagcccc
taacaatagcacattgcatagctggttttaggatcggtcagggtgacttt
ctttgaatgaacactccctgaacccaggaagcgggtgggtggaagaatgt
tgctatcttttttatgattagcatgcttggagcactgagtcacaaggtca
cattctccagcctgggcctaaaggctagttttttacactttcactacaga
tgtcatgcttatgttaacacaagtattataaacttaatctcaaagtaact
gaagccaccggcaaccctcccggatctaaggct
gaattctcttgttgtagctttgatgagactgctttggagaggcctcagtt
attctggttttagagagtactgtggcactctcttccagcgtcctcccctg
tggcagccctggcttcaattgcttgtccaagctctacagttcggatcccg
gacaagaactgtgtgttctcagctgttacctgccttccttgtgacagcag
tgggactgtcacccgtctctgttggagtccttgcctcccctctagacagc
agccttttctgtcacatggtaggaagtagtggcctggacaggctctcacg
tggctggcctgcagcttgctctgtagaccaggctgtcctcaactcagaga
tccagcagcttgtgttccccgagtgctgggaggaagggtgagcaccacca
tacttgcctgctgctgagcactctactaactatacttcatggcataagac
ttaaaggaaaggtcctgactctcaaacttttatggcagacattttttaaa
ggatagatcattttgtacctttttaggaattaagatctatccagtctcat
gagaagatctagcatcaacactagcaacaatttttttacattactgtgtt
gaatttcccatggaaacccagtatgcagtttggaaattttttattttaga
ggggtgttttttttatatgtttttgtatattttatgttgaccatctgctt
ttttaaaattttagttaacatttaaggaatttggccagatttgcatattt
taaaaagcatttaacttcctcatttatagataatattaaaaataattttg
aatttaatcatacactatgatatgaagcaaatatgtgatttgcaagttca
aaatatgacactgttaaatggaattcatttatttagtttgagaagtcgta
ttaatgtatgttcatgaattactggtttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_110688622_110689550
seq2: B6Ng01-147H17.g_68_996

seq1  GAATTCTCTTGTTGTAGCTTTGATGAGACTGCTTTGGAGAGGCCTCAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGTTGTAGCTTTGATGAGACTGCTTTGGAGAGGCCTCAGTT  50

seq1  ATTCTGGTTTTAGAGAGTACTGTGGCACTCTCTTCCAGCGTCCTCCCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGTTTTAGAGAGTACTGTGGCACTCTCTTCCAGCGTCCTCCCCTG  100

seq1  TGGCAGCCCTGGCTTCAATTGCTTGTCCAAGCTCTACAGTTCGGATCCCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCCCTGGCTTCAATTGCTTGTCCAAGCTCTACAGTTCGGATCCCG  150

seq1  GACAAGAACTGTGTGTTCTCAGCTGTTACCTGCCTTCCTTGTGACAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGAACTGTGTGTTCTCAGCTGTTACCTGCCTTCCTTGTGACAGCAG  200

seq1  TGGGACTGTCACCCGTCTCTGTTGGAGTCCTTGCCTCCCCTCTAGACAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTGTCACCCGTCTCTGTTGGAGTCCTTGCCTCCCCTCTAGACAGC  250

seq1  AGCCTTTTCTGTCACATGGTAGGAAGTAGTGGCCTGGACAGGCTCTCACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTTCTGTCACATGGTAGGAAGTAGTGGCCTGGACAGGCTCTCACG  300

seq1  TGGCTGGCCTGCAGCTTGCTCTGTAGACCAGGCTGTCCTCAACTCAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGCCTGCAGCTTGCTCTGTAGACCAGGCTGTCCTCAACTCAGAGA  350

seq1  TCCAGCAGCTTGTGTTCCCCGAGTGCTGGGAGGAAGGGTGAGCACCACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCAGCTTGTGTTCCCCGAGTGCTGGGAGGAAGGGTGAGCACCACCA  400

seq1  TACTTGCCTGCTGCTGAGCACTCTACTAACTATACTTCATGGCATAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGCCTGCTGCTGAGCACTCTACTAACTATACTTCATGGCATAAGAC  450

seq1  TTAAAGGAAAGGTCCTGACTCTCAAACTTTTATGGCAGACATTTTTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGAAAGGTCCTGACTCTCAAACTTTTATGGCAGACATTTTTTAAA  500

seq1  GGATAGATCATTTTGTACCTTTTTAGGAATTAAGATCTATCCAGTCTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGATCATTTTGTACCTTTTTAGGAATTAAGATCTATCCAGTCTCAT  550

seq1  GAGAAGATCTAGCATCAACACTAGCAACAATTTTTTTACATTACTGTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGATCTAGCATCAACACTAGCAACAATTTTTTTACATTACTGTGTT  600

seq1  GAATTTCCCATGGAAACCCAGTATGCAGTTTGGAAATTTTTTATTTTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCCCATGGAAACCCAGTATGCAGTTTGGAAATTTTTTATTTTAGA  650

seq1  GGGGTGTTTTTTTTATATG-TTTTGTATATTTTATGTTGACCATCTGCTT  699
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGGGTGTTTTTTTTATATGTTTTTGTATATTTTATGTTGACCATCTGCTT  700

seq1  TTTTAAAATTTTAGTTAACATTTAAGGAATTTGGCCAGATTTGCATATTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATTTTAGTTAACATTTAAGGAATTTGGCCAGATTTGCATATTT  750

seq1  TAAAAAGCATTTAACTTCCTCATTTATAGATAAAATTAAAAATAA-TTTG  798
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  TAAAAAGCATTTAACTTCCTCATTTATAGATAATATTAAAAATAATTTTG  800

seq1  AATTTAATCATACACTATGATATGAAGCAAATTATGTGATTTGCAAGTTC  848
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AATTTAATCATACACTATGATATGAAGCAAA-TATGTGATTTGCAAGTTC  849

seq1  AAAATATGACACTGTTAAAATGGAATTCATTTATTTAGTTTGAGAAGTCG  898
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAAATATGACACTGTT-AAATGGAATTCATTTATTTAGTTTGAGAAGTCG  898

seq1  TATATAATGTAGGTTCATGAA-TACTGTTTTC  929
      ||| ||||||| ||||||||| ||||| ||||
seq2  TAT-TAATGTATGTTCATGAATTACTGGTTTC  929