BAC Information

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BAC

Clone NameB6Ng01-149B06
Chromosome10 (Build37)
Map Location 112,032,024 - 112,033,148
singlet/doubletsinglet
Overlap genenone
Upstream geneKrr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2
Downstream geneLOC100042639, 4921506J03Rik, LOC100042655
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149B06.bB6Ng01-149B06.g
ACCDH945513DH945514
length1,122871
definitionDH945513|Mus musculus domesticus DNA, BAC clone: B6Ng01-149B06, 5' end.DH945514|Mus musculus domesticus DNA, BAC clone: B6Ng01-149B06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacacccctaagtcccttaccccataaaaacacgtagctttcaa
gcctcgtggctgacatccgatatgtcctgtgtgggatgcatgttggtccg
gagctccgtaattaaacatcctcatgtatttacatcaagatggtccttcg
tgattttttgggtgcacgccgaattgggaattgggtgggggtttacccac
taggttctaacaatgtctgctctagcaagtgacccttcatccatatccct
ctaagtagccccaataaaactcattgattcactatgttgaactttgattg
tatgggtactttgatctattgtgagaattctatctgaggagagtagaagt
gtgtgatttccacccctcaaaaagtgtatttcatactaggaaaatatata
gaagatgacttagtggatttagtctaagagtttaaataatagtagatatt
ttccaagtttatataaaatgtaaatacttaacatacctatatattaaatt
tatagtctagaatattgcttatgtttatgattagcacaagcaaatatcta
agtaaatctcatttgtaatgttgatatattggtcttcaaacaataaatta
tatttgaaaattcatccaaatatcttgaataacacattttcacttgaata
ttaaggatactacggtttcatgtatcattgcattgtaaatgtttatttga
tgtaagctcttcaaataattcctaaatttcctacttcttttatatgccat
ttttcattttatgaaagacatactaaaacacaagtatttctattaaaatt
tgatttcaaatattgagcaaatatagatttgtttccatatgttttctaag
aaaaatgcgtatactacgtttagaacagccaaaggcacatttattttttg
tatctaaacaaatggacaggctaagtgtaggaacttgtcatgattatttc
agtatattaatctgtaagtatacccagtgcaagcatcctattgtggctat
atagaataaatgaagtagaaataatgaattcccactgcctttaagatcct
tatttgccttaatttacctttaaaggatggtttccaaattagtatattca
tactactatgcaaaggcatagc

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
tccaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgatatgtggatattagccccaaacc
taggatacccaagatataagatataattttgctaaacacatgaaactcaa
ggagaatgaagactgaagtgtggacacttatgcccctccttagatttggg
gaacaaaacaccccatggaaggagttacagagacagagtttggagctgag
atgaaagggatggaccattgtagagactgccattacccagggatctaccc
ccattatcaacatccaaacgctgaaaccctttgcatacccagaaaaattt
tattggaagggcccaaatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_112032024_112033148
seq2: B6Ng01-149B06.b_46_1167 (reverse)

seq1  GCTATG-CTTTCCATAGTAGTATGATTATACTAATTTTGATAACAATCCT  49
      |||||| |||| ||||||||||||| ||||||||||| || ||| |||||
seq2  GCTATGCCTTTGCATAGTAGTATGAATATACTAATTTGGA-AACCATCCT  49

seq1  TT-AAGGTAAATTAAGGCAAATTAAAGGATCTTAAAGGCAGTGGGAATTC  98
      || |||||||||||||||||||  ||||||||||||||||||||||||||
seq2  TTAAAGGTAAATTAAGGCAAAT--AAGGATCTTAAAGGCAGTGGGAATTC  97

seq1  A-TATTTCTACCTTCATTTTATTCTAATATAG-CACAATAGGAATGCTTG  146
      | |||||||| ||||| |||||||| |||||| ||||||||| |||||||
seq2  ATTATTTCTA-CTTCA-TTTATTCT-ATATAGCCACAATAGG-ATGCTTG  143

seq1  CACTGGGTAATACTTACAGATTAATAATACTGAAATAATCATGACAAGTT  196
      |||||||| |||||||||||||||| ||||||||||||||||||||||||
seq2  CACTGGGT-ATACTTACAGATTAAT-ATACTGAAATAATCATGACAAGTT  191

seq1  CCTACACTTAGCCTGTCCATTTGTTTAGATACAAAAA--TAATGTGCCTT  244
      |||||||||||||||||||||||||||||||||||||   ||||||||||
seq2  CCTACACTTAGCCTGTCCATTTGTTTAGATACAAAAAATAAATGTGCCTT  241

seq1  TGGCTGTTCTAAACGTAGTATACGCATTTTTCTTAGAAAACATATGGAAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTTCTAAACGTAGTATACGCATTTTTCTTAGAAAACATATGGAAA  291

seq1  CAAATCTATATTTGCTCAATATTTGAAATCAAATTTTAATAGAAATACTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCTATATTTGCTCAATATTTGAAATCAAATTTTAATAGAAATACTT  341

seq1  GTGTTTTAGTATGTCTTTCATAAAATGAAAAATGGCATATAAAAGAAGTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTAGTATGTCTTTCATAAAATGAAAAATGGCATATAAAAGAAGTA  391

seq1  GGAAATTTAGGAATTATTTGAAGAGCTTACATCAAATAAACATTTACAAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTTAGGAATTATTTGAAGAGCTTACATCAAATAAACATTTACAAT  441

seq1  GCAATGATACATGAAACCGTAGTATCCTTAATATTCAAGTGAAAATGTGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGATACATGAAACCGTAGTATCCTTAATATTCAAGTGAAAATGTGT  491

seq1  TATTCAAGATATTTGGATGAATTTTCAAATATAATTTATTGTTTGAAGAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAGATATTTGGATGAATTTTCAAATATAATTTATTGTTTGAAGAC  541

seq1  CAATATATCAACATTACAAATGAGATTTACTTAGATATTTGCTTGTGCTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATATCAACATTACAAATGAGATTTACTTAGATATTTGCTTGTGCTA  591

seq1  ATCATAAACATAAGCAATATTCTAGACTATAAATTTAATATATAGGTATG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAAACATAAGCAATATTCTAGACTATAAATTTAATATATAGGTATG  641

seq1  TTAAGTATTTACATTTTATATAAACTTGGAAAATATCTACTATTATTTAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTATTTACATTTTATATAAACTTGGAAAATATCTACTATTATTTAA  691

seq1  ACTCTTAGACTAAATCCACTAAGTCATCTTCTATATATTTTCCTAGTATG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAGACTAAATCCACTAAGTCATCTTCTATATATTTTCCTAGTATG  741

seq1  AAATACACTTTTTGAGGGGTGGAAATCACACACTTCTACTCTCCTCAGAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACACTTTTTGAGGGGTGGAAATCACACACTTCTACTCTCCTCAGAT  791

seq1  AGAATTCTCACAATAGATCAAAGTACCCATACAATCAAAGTTCAACATAG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCTCACAATAGATCAAAGTACCCATACAATCAAAGTTCAACATAG  841

seq1  TGAATCAATGAGTTTTATTGGGGCTACTTAGAGGGATATGGATGAAGGGT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCAATGAGTTTTATTGGGGCTACTTAGAGGGATATGGATGAAGGGT  891

seq1  CACTTGCTAGAGCAGACATTGTTAGAACCTAGTGGGTAAACCCCCACCCA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCTAGAGCAGACATTGTTAGAACCTAGTGGGTAAACCCCCACCCA  941

seq1  ATTCCCAATTCGGCGTGCACCCAAAAAATCACGAAGGACCATCTTGATGT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAATTCGGCGTGCACCCAAAAAATCACGAAGGACCATCTTGATGT  991

seq1  AAATACATGAGGATGTTTAATTACGGAGCTCCGGACCAACATGCATCCCA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATGAGGATGTTTAATTACGGAGCTCCGGACCAACATGCATCCCA  1041

seq1  CACAGGACATATCGGATGTCAGCCACGAGGCTTGAAAGCTACGTGTTTTT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGACATATCGGATGTCAGCCACGAGGCTTGAAAGCTACGTGTTTTT  1091

seq1  ATGGGGTAAGGGACTTAGGGGTGTGGAATTC  1125
      |||||||||||||||||||||||||||||||
seq2  ATGGGGTAAGGGACTTAGGGGTGTGGAATTC  1122


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