BAC Information

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BAC

Clone NameB6Ng01-149E10
Chromosome10 (Build37)
Map Location 22,005,993 - 22,006,810
singlet/doubletsinglet
Overlap geneEG667281
Upstream geneLOC100039870, Hbs1l, Aldh8a1, LOC100039906, 1700020N01Rik, EG432436, LOC100039936, LOC628133, Sgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280
Downstream geneLOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078, Slc2a12, Tbpl1, Tcf21, Eya4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149E10.bB6Ng01-149E10.g
ACCDH945659DH945660
length8181,164
definitionDH945659|Mus musculus domesticus DNA, BAC clone: B6Ng01-149E10, 5' end.DH945660|Mus musculus domesticus DNA, BAC clone: B6Ng01-149E10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattggtggattctgggccatcaacactgatgaacagcatagcat
ctacttttatccacttaatatgacctggagagagagtcattctgataaca
gcagtgccatggagcactggaagaacaagaacctagagaaagatatcagg
aatgtcctcatcatatatttcagtcgctgcctcaacaaattgtcaccaca
ctttagagaaatgccaagtaagtagttaggagattgtcacaagaaacaac
cacagggtggaaaagacatggcagtgctcttgaaaattctgatgatttcc
tcatttggatgtgagcatgtgtacataatgggaatctgatggactgggtg
agtgactcattggtagtcttcctgtctgcagagtcagtgatgaccacgca
gagcctttctcattccccgttatccagtggcctaggctctacatggcctg
ctaatgagccccaagtctgtgtgcatcactgtgaacttccagccttttct
tctcagttatagctgcccttccaccaattccaagaccaattctgaagacc
tcattatctttctctggcacaattgaacaacaccaataatgtcaacttcc
ataaagttctaaccaaagtaaaatatggcacagtttgttagagttcaata
gacatgtgctttcttcgggagtaaaataaactgtgtaaggacgtcttaca
cacacatcctattcatctttctctgtatggtctgggaaaaaggttatcca
catgagttccttgggatgcacagggagaaagagttgatgatggaggtata
gggttttgtttgtttgtt
gaattcaggattgcaaactttgaaaaggttaaatgaatttattagaccaa
aggagatttgttacagctctgattttaggaattactgctttaattgcaat
tttaacttcttttgcagtatctaccacagctttagttcggcaactacata
cctctcattttgttatacataaactggaggcaaaggttaatgctttaaaa
aaaaaaaaggtagttttagcaatagcttgagacaggatataccaagtatt
aaggctaggttaacagaaatttcagatattagcagaagccatttgaatac
ttggaacattgatgaattgaccagagatttaaagaataacctaagtgcat
tgaatcccttggattgggttcaatatataatcttgcttgctaatattact
ggaattattttattagtaatcattgtgtttccactcatctctagagttct
tctgagatctgtagctaccacgaagcgggacattctggaatttcgtctaa
aaaaataaaaaacagggggaactgctacatccactccagtagtgacaagc
acaacaggccccaaaaacctgggtgctgtcccatggcgaaaagttcacag
aaacttagtctcctagaatcatggcatcctgtataaagaatgctccaatg
tccttgctttagttggtaaatggagctgtgtgctttcccttaacattgct
ttattacaagtgctcctaaggattgatattttgatatatagctaagttag
attctagccagtccttgatccgaccttgggcatggatagctaagtcactg
ctctacacagaaatttaccattatctgggaagaaggaagtttgtgaccta
aagaggaaccagagtagataatacttagaactataggtagctgagttaca
ccatacacaagtatttacaatggcctaaggggaaagtcgactagagtaga
actattggcaagggcattagatagtggaccttacttggagctgttttgat
ccagttgttaacattggagttttaccccggtggttcctgcagttttcatg
ttgaatttcttgttttggtagaatcagtacctctttgacttgccggtggt
cacccacttcctatttcctctgttaaaaaggtttgatgccgattgaacaa
tacatctagaactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_22005993_22006810
seq2: B6Ng01-149E10.b_49_866

seq1  GAATTCATTGGTGGATTCTGGGCCATCAACACTGATGAACAGCATAGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGTGGATTCTGGGCCATCAACACTGATGAACAGCATAGCAT  50

seq1  CTACTTTTATCCACTTAATATGACCTGGAGAGAGAGTCATTCTGATAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTTATCCACTTAATATGACCTGGAGAGAGAGTCATTCTGATAACA  100

seq1  GCAGTGCCATGGAGCACTGGAAGAACAAGAACCTAGAGAAAGATATCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGCCATGGAGCACTGGAAGAACAAGAACCTAGAGAAAGATATCAGG  150

seq1  AATGTCCTCATCATATATTTCAGTCGCTGCCTCAACAAATTGTCACCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCTCATCATATATTTCAGTCGCTGCCTCAACAAATTGTCACCACA  200

seq1  CTTTAGAGAAATGCCAAGTAAGTAGTTAGGAGATTGTCACAAGAAACAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAGAAATGCCAAGTAAGTAGTTAGGAGATTGTCACAAGAAACAAC  250

seq1  CACAGGGTGGAAAAGACATGGCAGTGCTCTTGAAAATTCTGATGATTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGTGGAAAAGACATGGCAGTGCTCTTGAAAATTCTGATGATTTCC  300

seq1  TCATTTGGATGTGAGCATGTGTACATAATGGGAATCTGATGGACTGGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGGATGTGAGCATGTGTACATAATGGGAATCTGATGGACTGGGTG  350

seq1  AGTGACTCATTGGTAGTCTTCCTGTCTGCAGAGTCAGTGATGACCACGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTCATTGGTAGTCTTCCTGTCTGCAGAGTCAGTGATGACCACGCA  400

seq1  GAGCCTTTCTCATTCCCCGTTATCCAGTGGCCTAGGCTCTACATGGCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTTTCTCATTCCCCGTTATCCAGTGGCCTAGGCTCTACATGGCCTG  450

seq1  CTAATGAGCCCCAAGTCTGTGTGCATCACTGTGAACTTCCAGCCTTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAGCCCCAAGTCTGTGTGCATCACTGTGAACTTCCAGCCTTTTCT  500

seq1  TCTCAGTTATAGCTGCCCTTCCACCAATTCCAAGACCAATTCTGAAGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTTATAGCTGCCCTTCCACCAATTCCAAGACCAATTCTGAAGACC  550

seq1  TCATTATCTTTCTCTGGCACAATTGAACAACACCAATAATGTCAACTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATCTTTCTCTGGCACAATTGAACAACACCAATAATGTCAACTTCC  600

seq1  ATAAAGTTCTAACCAAAGTAAAATATGGCACAGTTTGTTAGAGTTCAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTTCTAACCAAAGTAAAATATGGCACAGTTTGTTAGAGTTCAATA  650

seq1  GACATGTGCTTTCTTCGGGAGTAAAATAAACTGTGTAAGGACGTCTTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTGCTTTCTTCGGGAGTAAAATAAACTGTGTAAGGACGTCTTACA  700

seq1  CACACATCCTATTCATCTTTCTCTGTATGGTCTGGGAAAAAGGTTATCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATCCTATTCATCTTTCTCTGTATGGTCTGGGAAAAAGGTTATCCA  750

seq1  CATGAGTTCCTTGGGATGCACAGGGAGAAAGAGTTGATGATGGAGGTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTTCCTTGGGATGCACAGGGAGAAAGAGTTGATGATGGAGGTATA  800

seq1  GGGTTTTGTTTGTTTGTT  818
      ||||||||||||||||||
seq2  GGGTTTTGTTTGTTTGTT  818