BAC Information

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BAC

Clone NameB6Ng01-149P04
Chromosome10 (Build37)
Map Location 93,221,144 - 93,333,643
singlet/doubletdoublet
Overlap geneLOC100041907, Usp44, Metap2
Upstream geneGm872, 4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854, Lta4h, Hal, Amdhd1, Ccdc38, Snrpf, LOC100041873, Ntn4, LOC667338
Downstream geneVezt, Fgd6, Nr2c1, Ndufa12, EG215472, LOC100041955, Tmcc3, EG667315, 4921537D05Rik, Plxnc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149P04.bB6Ng01-149P04.g
ACCDH946150DH946151
length5311,118
definitionDH946150|Mus musculus domesticus DNA, BAC clone: B6Ng01-149P04, 5' end.DH946151|Mus musculus domesticus DNA, BAC clone: B6Ng01-149P04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,221,144 - 93,221,680)(93,332,507 - 93,333,643)
sequence
aatgcccttttctagtcttctagggcacctgcatgcatgcagttcacata
cataaatataagcaaaacacacttatacataagataaaaataaatgtatt
tttgaaaagttttagtcagggctggagagatgatacagcagttaagagcc
cttgtggtttgctcatgcagaggatctgggttccatttccagcactccca
tatctcacaaccatcagtaactaggaactctcgttccaggagatccaccc
tcctcgtctggtctccacagacaccaggcaagcacttggtacacacgtaa
acaaaatgctaatgcacataagtgtgtgtgtgtgtgtgtgtgtctgtatc
tgtctgtctgtctctgtgtgtgtctatctgtctgtctgtgtgtgtctgtg
tgtgtctgtgtctgtctgtctgtgtgtgtgtctgtctgtctgtctgtctg
tctgtgtctgtgtatgtctgtctgtctgtctgggtgtgtctgggtgtgtc
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gaattcttacatttctatacacaaatatagtgagggaactagtaaactta
ttcttcttaaccttgtgaaatgattagcagagaagagaattctcttactt
aaataatttttaaaatacacactatgagcctggagagatgggtcagtggt
tgagagaacactggctgctcttcaagctgtcctgggtggaattcccagca
cccacgtggcagtgcagtggcagctcacagttgtttgtaactccatggag
ggcatctgctgcttttttctggcctctttcagcaccaggcatgcaggtgg
tacgtacatagacatacatgcaggcagagcacccaggtatataacattaa
aacgtatatatgtgtgtgcacatatgcacatgacgtgcagcttgtagcag
caacttaaatttggtgtaagttgaaacttataaaatggctggtaactgaa
gttcagagtagtgttctcttgagtttgggatggcagagatttatttccgt
gtctcttatgagctccgcattcagaaagtactcatatcattcccagaaag
taaccaggtttttaaggtatgaaactgaaaacaaatcctttgtctttcag
tgagaagttggaagactgttcccgaaagctaataaaggaaaatgggttaa
atgcaggcctggcgttccccactgggtgttctctcaacaactgtgctgcc
cattacactcccaatgctggtgacacgacagtcttgcagtatgatgacat
ctgtaagatagactttggaacacatataagtggtgagtctggggtaatcc
catcccatcttccacccagccatgcctcctgggctcccaggatgcctttt
gtaagcagtagatggagctgtgaatactaaacaccaagctttgttcttgg
ctccttctctaaagctgtactggggcagagttttgtttgctttagtttaa
agcatcctacttaactggaaactatttgatattgacattcatttgttttc
atatgatgtacatttttccccattcagcattgttttattatcattatact
caaatacagaatattgacaggctggtatattgccaatagctgacttcagt
ccaatatcagtgtggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_93221144_93221680
seq2: B6Ng01-149P04.b_45_581

seq1  GAATTCAATGCCCTTTTCTAGTCTTCTAGGGCACCTGCATGCATGCAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCCCTTTTCTAGTCTTCTAGGGCACCTGCATGCATGCAGTT  50

seq1  CACATACATAAATATAAGCAAAACACACTTATACATAAGATAAAAATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACATAAATATAAGCAAAACACACTTATACATAAGATAAAAATAAA  100

seq1  TGTATTTTTGAAAAGTTTTAGTCAGGGCTGGAGAGATGATACAGCAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTTGAAAAGTTTTAGTCAGGGCTGGAGAGATGATACAGCAGTTA  150

seq1  AGAGCCCTTGTGGTTTGCTCATGCAGAGGATCTGGGTTCCATTTCCAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCCTTGTGGTTTGCTCATGCAGAGGATCTGGGTTCCATTTCCAGCA  200

seq1  CTCCCATATCTCACAACCATCAGTAACTAGGAACTCTCGTTCCAGGAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATATCTCACAACCATCAGTAACTAGGAACTCTCGTTCCAGGAGAT  250

seq1  CCACCCTCCTCGTCTGGTCTCCACAGACACCAGGCAAGCACTTGGTACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTCCTCGTCTGGTCTCCACAGACACCAGGCAAGCACTTGGTACAC  300

seq1  ACGTAAACAAAATGCTAATGCACATAAGTGTGTGTGTGTGTGTGTGTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAAACAAAATGCTAATGCACATAAGTGTGTGTGTGTGTGTGTGTGTC  350

seq1  TGTATCTGTCTGTCTGTCTCTGTGTGTGTCTATCTGTCTGTCTGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTGTCTGTCTGTCTCTGTGTGTGTCTATCTGTCTGTCTGTGTGTG  400

seq1  TCTGTGTGTGTCTGTGTCTGTCTGTCTGTGTGTGTGTCTGTCTGTCTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGTGTCTGTGTCTGTCTGTCTGTGTGTGTGTCTGTCTGTCTGTC  450

seq1  TGTCTGTCTGTGTCTGTGTATGTCTGTCTGTCTGTCTGGGTGTGTCTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTGTGTCTGTGTATGTCTGTCTGTCTGTCTGGGTGTGTCTGGG  500

seq1  TGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  537
      |||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  537

seq1: chr10_93332507_93333643
seq2: B6Ng01-149P04.g_70_1187 (reverse)

seq1  CCACCA-ACTGATATTGGGGACTGAATGTCAGACTATTGAGCTATATATA  49
      |||||| |||||||||  |||||||| ||||| |||||| || |||||  
seq2  CCACCACACTGATATT--GGACTGAA-GTCAG-CTATTG-GCAATATA--  43

seq1  CCCAGCCCTGGTCCAATATCTTGTATTTGAGTATAATTGTATATAAAACA  99
       |||| ||||   ||||||  ||||||||||||||||  || ||||||||
seq2  -CCAG-CCTG--TCAATATTCTGTATTTGAGTATAATGATA-ATAAAACA  88

seq1  ATGGCCTGAATGGGGGAAAAATGTACAATCATATGAAAACAAAATGAATG  149
      |||  |||||| |||||||||||||| ||||||||||||| |||||||||
seq2  ATG--CTGAAT-GGGGAAAAATGTAC-ATCATATGAAAAC-AAATGAATG  133

seq1  TCAATATTCAAATAGTTTCCAGTTTAAGTAGGATGCTTTAAACCTAAAGC  199
      |||||| ||||||||||||||| ||||||||||||||||||| |||||||
seq2  TCAATA-TCAAATAGTTTCCAG-TTAAGTAGGATGCTTTAAA-CTAAAGC  180

seq1  AAACAAAACTCTGCCCCAGTACAGCTTTAGAGAAGGAGCCAAGAACAAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACTCTGCCCCAGTACAGCTTTAGAGAAGGAGCCAAGAACAAAG  230

seq1  CTTGGTGTTTAGTATTCACAGCTCCATCTACTGCTTACAAAAGGCATCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGTTTAGTATTCACAGCTCCATCTACTGCTTACAAAAGGCATCCT  280

seq1  GGGAGCCCAGGAGGCATGGCTGGGTGGAAGATGGGATGGGATTACCCCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCCAGGAGGCATGGCTGGGTGGAAGATGGGATGGGATTACCCCAG  330

seq1  ACTCACCACTTATATGTGTTCCAAAGTCTATCTTACAGATGTCATCATAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACCACTTATATGTGTTCCAAAGTCTATCTTACAGATGTCATCATAC  380

seq1  TGCAAGACTGTCGTGTCACCAGCATTGGGAGTGTAATGGGCAGCACAGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGACTGTCGTGTCACCAGCATTGGGAGTGTAATGGGCAGCACAGTT  430

seq1  GTTGAGAGAACACCCAGTGGGGAACGCCAGGCCTGCATTTAACCCATTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGAGAACACCCAGTGGGGAACGCCAGGCCTGCATTTAACCCATTTT  480

seq1  CCTTTATTAGCTTTCGGGAACAGTCTTCCAACTTCTCACTGAAAGACAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTAGCTTTCGGGAACAGTCTTCCAACTTCTCACTGAAAGACAAA  530

seq1  GGATTTGTTTTCAGTTTCATACCTTAAAAACCTGGTTACTTTCTGGGAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGTTTTCAGTTTCATACCTTAAAAACCTGGTTACTTTCTGGGAAT  580

seq1  GATATGAGTACTTTCTGAATGCGGAGCTCATAAGAGACACGGAAATAAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGAGTACTTTCTGAATGCGGAGCTCATAAGAGACACGGAAATAAAT  630

seq1  CTCTGCCATCCCAAACTCAAGAGAACACTACTCTGAACTTCAGTTACCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCATCCCAAACTCAAGAGAACACTACTCTGAACTTCAGTTACCAG  680

seq1  CCATTTTATAAGTTTCAACTTACACCAAATTTAAGTTGCTGCTACAAGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTATAAGTTTCAACTTACACCAAATTTAAGTTGCTGCTACAAGCT  730

seq1  GCACGTCATGTGCATATGTGCACACACATATATACGTTTTAATGTTATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTCATGTGCATATGTGCACACACATATATACGTTTTAATGTTATAT  780

seq1  ACCTGGGTGCTCTGCCTGCATGTATGTCTATGTACGTACCACCTGCATGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGTGCTCTGCCTGCATGTATGTCTATGTACGTACCACCTGCATGC  830

seq1  CTGGTGCTGAAAGAGGCCAGAAAAAAGCAGCAGATGCCCTCCATGGAGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCTGAAAGAGGCCAGAAAAAAGCAGCAGATGCCCTCCATGGAGTT  880

seq1  ACAAACAACTGTGAGCTGCCACTGCACTGCCACGTGGGTGCTGGGAATTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAACTGTGAGCTGCCACTGCACTGCCACGTGGGTGCTGGGAATTC  930

seq1  CACCCAGGACAGCTTGAAGAGCAGCCAGTGTTCTCTCAACCACTGACCCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGGACAGCTTGAAGAGCAGCCAGTGTTCTCTCAACCACTGACCCA  980

seq1  TCTCTCCAGGCTCATAGTGTGTATTTTAAAAATTATTTAAGTAAGAGAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCAGGCTCATAGTGTGTATTTTAAAAATTATTTAAGTAAGAGAAT  1030

seq1  TCTCTTCTCTGCTAATCATTTCACAAGGTTAAGAAGAATAAGTTTACTAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTCTGCTAATCATTTCACAAGGTTAAGAAGAATAAGTTTACTAG  1080

seq1  TTCCCTCACTATATTTGTGTATAGAAATGTAAGAATTC  1137
      ||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCACTATATTTGTGTATAGAAATGTAAGAATTC  1118