BAC Information

Click to search

BAC

Clone NameB6Ng01-151F05
Chromosome10 (Build37)
Map Location 94,982,853 - 95,127,824
singlet/doubletdoublet
Overlap geneUbe2n, Nudt4
Upstream geneTmcc3, EG667315, 4921537D05Rik, Plxnc1, Cradd, Socs2, LOC100042004, D10Ertd322e
Downstream geneEG628119, Eea1, EG432491, LOC667380, Btg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151F05.bB6Ng01-151F05.g
ACCDH947171DH947172
length1,181883
definitionDH947171|Mus musculus domesticus DNA, BAC clone: B6Ng01-151F05, 5' end.DH947172|Mus musculus domesticus DNA, BAC clone: B6Ng01-151F05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,982,853 - 94,984,052)(95,126,948 - 95,127,824)
sequence
gaattctctttgtagttgagtgttggggtagagctaaggttgccaggtca
atgcttactcactgagctatctctgatcctatttgattgttttgagacta
gggtggtcttgtacttgacagcttgttttagcttccagtgtggtgggatc
ataggcataccaacaaactcaaagagatattctcttgtgtttttaaaatt
agtcatggacaataaaatagtctgataaaatagtagctgacttactcaag
gagatagttgacttacttgattaaaatctagcaagctaagggggagtgat
gtcgcttacccaatataatgtttgtctagagtttttaaaagccctgggtt
tggtggcccatgggctatatagtttaaatacttgggaagtagatgcagga
aaatcttgaacttcaaggttatccttttctgttgagttccatccagcctg
gaatacattttaaaaccaaccaaacagccaacctactgacttagcttgga
catcctttttaccaattttcctttcctatatggtgagggtttctgcttct
ctcccctttcctcttctttatattttatttctttttgagtcagggccttg
ctgtgcaagatgggttcttgcttgtgttcctcctgtttgagcctcctaaa
tgctgagatcatggaagtgtgtcctctcagccacattcttagttcttttc
tgctctgcaactgtgtaaagcttgagctcctgctaagctatagtcagccc
ataaagtactgtgaagtgttgactctagcatctaattctaattgttcata
catcttgcttttacaaagaaaattggctgttcatatttgcaaggtcttta
attttcagtactatcatttgtctttctggttggttaattttagataagtc
aatttgtattttcaaagtattttacagatttaggaagtatactattgtag
ctaagaaaacaaacacgtcactaatctagtaagactcttaaggatgagta
tcattctcataactgatttgtctgcttttctgtcttctactcaaaaagct
gccgctatgcgagggaatagtcagtataaggttaagaaggtattgaatat
tagtcgtactgatttaactaagtttaaggctgttgaatcctgtttagttg
cttgttcgaagagttgccagtagaacgttga
gaattcataaaattaagagatgtaaatacctcttggtcacgtggacttca
tccaatcagctctactcaaaagaagagagattcacactgaggttgcactg
aggaaacacagttcacttttctgagaccaacccgaggatgacaacatagg
gagttgttctacctgcttgtaaagaaagacatacacctgggaggaggtct
cttcctcatgcctcttaagtgacaagcccttctagccttggccagcgcta
gcatctaagggcagctgtaaaaagccttgtaattagggctgcacacagaa
cgctgaagtttaggatcccattgcagcacaacacagggatctggagtcac
tcgagagaccttctctagaaagccaagaaaataaacttaagtaggtccaa
ggtccaagacagatagaaaggtagtcagacaggcagacagacaagacttc
ccaagacattgccttcctatcacagtgatactttatttttttttaccatt
cttttatctaatatataaaaacataaaaattatacatatttatagggtat
tatgtgatatatataatatatataaatataatgtttacattgggttaaat
atatttaatacctcaaagtatttattgtttctttattctcttcttttcat
ttgaaataagcagcatattttccttgtctacagtcactcaacagtacagt
agcacacagggccctcttgctattatatctaagcagtaagtagacactga
ccaatcttcccactttcttccagccagcctcagataaactctcaatttct
aacatttttggttatgtgactgttcacctagtcataaataaaataaatta
gattaaaaacaaagtggttggggcgtggtggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_94982853_94984052
seq2: B6Ng01-151F05.b_44_1224

seq1  GAATTCTCTTTGTAGTTGAGTGTTGGGGTAGAGCTAAGGTTGCCAGGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTGTAGTTGAGTGTTGGGGTAGAGCTAAGGTTGCCAGGTCA  50

seq1  ATGCTTACTCACTGAGCTATCTCTGATCCTATTTGATTGTTTTGAGACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTACTCACTGAGCTATCTCTGATCCTATTTGATTGTTTTGAGACTA  100

seq1  GGGTGGTCTTGTACTTGACAGCTTGTTTTAGCTTCCAGTGTGGTGGGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTCTTGTACTTGACAGCTTGTTTTAGCTTCCAGTGTGGTGGGATC  150

seq1  ATAGGCATACCAACAAACTCAAAGAGATATTCTCTTGTGTTTTTAAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCATACCAACAAACTCAAAGAGATATTCTCTTGTGTTTTTAAAATT  200

seq1  AGTCATGGACAATAAAATAGTCTGATAAAATAGTAGCTGACTTACTCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGGACAATAAAATAGTCTGATAAAATAGTAGCTGACTTACTCAAG  250

seq1  GAGATAGTTGACTTACTTGATTAAAATCTAGCAAGCTAAGGGGGAGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGTTGACTTACTTGATTAAAATCTAGCAAGCTAAGGGGGAGTGAT  300

seq1  GTCGCTTACCCAATATAATGTTTGTCTAGAGTTTTTAAAAGCCCTGGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGCTTACCCAATATAATGTTTGTCTAGAGTTTTTAAAAGCCCTGGGTT  350

seq1  TGGTGGCCCATGGGCTATATAGTTTAAATACTTGGGAAGTAGATGCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCCCATGGGCTATATAGTTTAAATACTTGGGAAGTAGATGCAGGA  400

seq1  AAATCTTGAACTTCAAGGTTATCCTTTTCTGTTGAGTTCCATCCAGCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTGAACTTCAAGGTTATCCTTTTCTGTTGAGTTCCATCCAGCCTG  450

seq1  GAATACATTTTAAAACCAACCAAACAGCCAACCTACTGACTTAGCTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACATTTTAAAACCAACCAAACAGCCAACCTACTGACTTAGCTTGGA  500

seq1  CATCCTTTTTACCAATTTTCCTTTCCTATATGGTGAGGGTTTCTGCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTTTACCAATTTTCCTTTCCTATATGGTGAGGGTTTCTGCTTCT  550

seq1  CTCCCCTTTCCTCTTCTTTATATTTTATTTCTTTTTGAGTCAGGGCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTTTCCTCTTCTTTATATTTTATTTCTTTTTGAGTCAGGGCCTTG  600

seq1  CTGTGCAAGATGGGTTCTTGCTTGTGTTCCTCCTGTTTGAGCCTCCTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCAAGATGGGTTCTTGCTTGTGTTCCTCCTGTTTGAGCCTCCTAAA  650

seq1  TGCTGAGATCATGGAAGTGTGTCCTCTCAGCCACATTCTTAGTTCTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGATCATGGAAGTGTGTCCTCTCAGCCACATTCTTAGTTCTTTTC  700

seq1  TGCTCTGCAACTGTGTAAAGCTTGAGCTCCTGCTAAGCTATAGTCAGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGCAACTGTGTAAAGCTTGAGCTCCTGCTAAGCTATAGTCAGCCC  750

seq1  ATAAAGTACTGTGAAGTGTTGACTCTAGCATCTAATTCTAATTGTTCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTACTGTGAAGTGTTGACTCTAGCATCTAATTCTAATTGTTCATA  800

seq1  CATCTTGCTTTTACAAAGAAAATTGGCTGTTCATATTTGCAAGGTCTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGCTTTTACAAAGAAAATTGGCTGTTCATATTTGCAAGGTCTTTA  850

seq1  ATTTTCAGTACTATCATTTGTCTTTCTGGTTGGTTAATTTTAGATAAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGTACTATCATTTGTCTTTCTGGTTGGTTAATTTTAGATAAGTC  900

seq1  AATTTGTATTTTCAAAGTA-TTTACAGATTTAGGAAGTATAACTATTGTA  949
      ||||||||||||||||||| |||||||||||||||||||| |||||||||
seq2  AATTTGTATTTTCAAAGTATTTTACAGATTTAGGAAGTAT-ACTATTGTA  949

seq1  GCTAAGAAAACAAACACGTCACTAATCTAGTAAGACTCTTAAGGATGAGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAAAACAAACACGTCACTAATCTAGTAAGACTCTTAAGGATGAGT  999

seq1  ATCATTCTTCCATAACTGATTTGTCTGCCTTTCTGTCTTCTACTC-AAAA  1048
      ||||||||  |||||||||||||||||| |||||||||||||||| ||||
seq2  ATCATTCT--CATAACTGATTTGTCTGCTTTTCTGTCTTCTACTCAAAAA  1047

seq1  GCTG-CGCTATGCAGAGGGAATAGTCAGTATAAAGTGTAGAGAAAGTACT  1097
      |||| |||||||| ||||||||||||||||||| || || |||| ||| |
seq2  GCTGCCGCTATGC-GAGGGAATAGTCAGTATAAGGT-TA-AGAAGGTATT  1094

seq1  GAAATATTAAGTCCAGTAACTGATGTTAACCTTAAAAGTTTTAGGGTTGT  1147
      | |||||| ||||  || |||||| |||||  |||    |||| || |||
seq2  G-AATATT-AGTC--GT-ACTGAT-TTAAC--TAA---GTTTAAGGCTGT  1133

seq1  TGAAAATCCTGTTTAGTTGCTGTGTTCAGAGAGTTGCCAGTAAGAACTGT  1197
      ||  ||||||||||||||||| |||||  |||||||||||| ||||| ||
seq2  TG--AATCCTGTTTAGTTGCT-TGTTCGAAGAGTTGCCAGT-AGAAC-GT  1178

seq1  TGA  1200
      |||
seq2  TGA  1181

seq1: chr10_95126948_95127824
seq2: B6Ng01-151F05.g_70_952 (reverse)

seq1  TGCCACCACGCCC--AGCACTTTTGTTTTTAATCTAATTTATTTTATTTA  48
      | |||||||||||  | ||| |||||||||||||||||||||||||||||
seq2  TACCACCACGCCCCAACCAC-TTTGTTTTTAATCTAATTTATTTTATTTA  49

seq1  TGACTAGGTGAACAGTCACATAACC-AAAATGTTAGAAATTGAGAGTTTA  97
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGACTAGGTGAACAGTCACATAACCAAAAATGTTAGAAATTGAGAGTTTA  99

seq1  TCTGAGGCTGGCTGGAAG-AAGTGGGAAGATTGGTCAGTGTCTACTTACT  146
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCTGAGGCTGGCTGGAAGAAAGTGGGAAGATTGGTCAGTGTCTACTTACT  149

seq1  GCTTAGATATAATAGCAAGA-GGCCCTGTGTGCTACTGTACTGTTGAGTG  195
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCTTAGATATAATAGCAAGAGGGCCCTGTGTGCTACTGTACTGTTGAGTG  199

seq1  ACTGTAGACAAGGAAAATATGCTGCTTATTTCAAATG-AAAGAAGAGAAT  244
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACTGTAGACAAGGAAAATATGCTGCTTATTTCAAATGAAAAGAAGAGAAT  249

seq1  AAAGAAACAATAAATAC-TTGAGGTATTAAATATATTTAACCCAATGTAA  293
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAAGAAACAATAAATACTTTGAGGTATTAAATATATTTAACCCAATGTAA  299

seq1  ACATTATATTTATATATATTATATATATCACATAATACCCTATAAATATG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATATTTATATATATTATATATATCACATAATACCCTATAAATATG  349

seq1  TATAATTTTTATGTTTTTATATATTAGATAAAAGAATGGTAAAAAAAAAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTTTTATGTTTTTATATATTAGATAAAAGAATGGTAAAAAAAAAT  399

seq1  AAAGTATCACTGTGATAGGAAGGCAATGTCTTGGGAAGTCTTGTCTGTCT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATCACTGTGATAGGAAGGCAATGTCTTGGGAAGTCTTGTCTGTCT  449

seq1  GCCTGTCTGACTACCTTTCTATCTGTCTTGGACCTTGGACCTACTTAAGT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCTGACTACCTTTCTATCTGTCTTGGACCTTGGACCTACTTAAGT  499

seq1  TTATTTTCTTGGCTTTCTAGAGAAGGTCTCTCGAGTGACTCCAGATCCCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCTTGGCTTTCTAGAGAAGGTCTCTCGAGTGACTCCAGATCCCT  549

seq1  GTGTTGTGCTGCAATGGGATCCTAAACTTCAGCGTTCTGTGTGCAGCCCT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTGCTGCAATGGGATCCTAAACTTCAGCGTTCTGTGTGCAGCCCT  599

seq1  AATTACAAGGCTTTTTACAGCTGCCCTTAGATGCTAGCGCTGGCCAAGGC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAAGGCTTTTTACAGCTGCCCTTAGATGCTAGCGCTGGCCAAGGC  649

seq1  TAGAAGGGCTTGTCACTTAAGAGGCATGAGGAAGAGACCTCCTCCCAGGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGGCTTGTCACTTAAGAGGCATGAGGAAGAGACCTCCTCCCAGGT  699

seq1  GTATGTCTTTCTTTACAAGCAGGTAGAACAACTCCCTATGTTGTCATCCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTCTTTCTTTACAAGCAGGTAGAACAACTCCCTATGTTGTCATCCT  749

seq1  CGGGTTGGTCTCAGAAAAGTGAACTGTGTTTCCTCAGTGCAACCTCAGTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTTGGTCTCAGAAAAGTGAACTGTGTTTCCTCAGTGCAACCTCAGTG  799

seq1  TGAATCTCTCTTCTTTTGAGTAGAGCTGATTGGATGAAGTCCACGTGACC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTCTCTTCTTTTGAGTAGAGCTGATTGGATGAAGTCCACGTGACC  849

seq1  AAGAGGTATTTACATCTCTTAATTTTATGAATTC  877
      ||||||||||||||||||||||||||||||||||
seq2  AAGAGGTATTTACATCTCTTAATTTTATGAATTC  883