BAC Information

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BAC

Clone NameB6Ng01-155E13
Chromosome10 (Build37)
Map Location 104,053,903 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155E13.bB6Ng01-155E13.g
ACCDH950112DH950113
length1,222901
definitionDH950112|Mus musculus domesticus DNA, BAC clone: B6Ng01-155E13, 5' end.DH950113|Mus musculus domesticus DNA, BAC clone: B6Ng01-155E13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatccaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcattcctggaataaaacctacttggtcaggctggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtcatagtggcttcataaaatgagttg
ggtagagtactttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacctgtctg
gtcctgggcttttttttggctgggagactatttataactgcttctatttc
tttaggggatatgggactgtttagaaggtcaacttgatcctgattcaact
ttggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcc
agttttgttgagtatagccttttgtagaaggatctgatggtgttttggat
ttcttcaggatctgttgttatgtctcccttttcagttctgattttgttaa
ttaggattttgtctctgtgccctctagtgagtctagctaaggatttatct
ttcttgttgattttctcaaagaaccaactcctcgtttggttaattctttg
aatagttcttcttgttcccacttggttgatttcacccctgagtttgatta
tttcctgccgtctactcctcttgggtgaatttgcttcctttttttctaga
gcttttagatgtgttgtcaagctgctagtatgtgctctctcccgtttctc
atggagcactcagagctatgagtttcctcttagaatgctttcatgtgtcc
aaagtttgggtacgtgtgcttcatttcattaactctaagtctttaattct
tctttattctccctgaccaaggatcatggaaaaggtgttcaggttccacg
tgagagttgctccggtttttttgtatgaagatcagctagtcatggtgatc
tgtaagaatatgcattcaatatgaactcgttagccgtttgacacatattt
ggctaatattggaaagaagtcg

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaaac
gttcaacatccttaatcatcagggaaatgcaacacaaaacaaccctgaga
ttccacctcacaccagtcagaatgactaagaacaaaaattcaggtgacag
cagatgctggtgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatactactaccagaggatccagcaatacctctcctggg
catatatccagaagatgttccaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtgctatatttacacaat
ggagtactactcagctattaaaaggaatgaatttataaaattcctaggca
aatggatggacatggagggcatcatcctgagtgaggtaacacaatcacaa
aggaactcacacaatatgtacttactgataagtggatattagcccaaaaa
cttaggatacccaagatataagatacaatttgttaaatgcatgaaactca
agaagaacgaagaccaaagtgtggacactgtgccccttcttagaattggg
aaccaaacacccatggaaagagttacagagataaagtttggagctgtgat
gaaaggatggaccatccaaagactgccatatccagggatccatcccataa
tctgaagcgtccactctcaaccagcaagaatgacacaaccaccagtcctt
ctacagcagtttattcagtcctgattcctctgttatatctcccctgaacc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-155E13.g_67_538 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          ||||||||||||||| || |||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAAATATAGCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCGGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||  |||||||||||||||||||||| |||||||||||||||||||| |
seq2  TGGAACATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCTG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||| ||||||||||||||||| |||||||||||| ||||||||||||
seq2  GTAGTAGTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||| |||||||||||||||||||||||||||| |||||| ||
seq2  TCCACATCCTCACCAGCATCTGCTGTCACCTGAATTTTTGTTCTTAGTCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      ||||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGTGTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAAC-ATTTTTTCAGGTGCTTCTCTGCCATTC  439
      ||||||||||||||||||||||  ||||||||||||||||||||||||||
seq2  CTGATGATTAAGGATGTTGAACGTTTTTTTCAGGTGCTTCTCTGCCATTC  450

seq1  GGTATTCCTCAGGTGAGAATTC  461
      ||||||||||||||||||||||
seq2  GGTATTCCTCAGGTGAGAATTC  472


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