BAC Information

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BAC

Clone NameB6Ng01-156A02
Chromosome10 (Build37)10 (Build37)
Map Location 104,053,463 - 104,054,36344,263,983 - 44,264,885
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156A02.bB6Ng01-156A02.g
ACCDH950628DH950629
length973907
definitionDH950628|Mus musculus domesticus DNA, BAC clone: B6Ng01-156A02, 5' end.DH950629|Mus musculus domesticus DNA, BAC clone: B6Ng01-156A02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,463 - 104,054,363)(44,263,983 - 44,264,885)
sequence
gaattctcacctaaggaataccgaatccgcagagaaacacctgaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagt
agatgcaggcgaggatgtggagaaagaggaacaatcctccattgttggtg
ggattgcaagcttatacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctttcctgggc
atatatccagaagatgttccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggttggacctggagggcatcatcctgagtgtggcaacacaatcacaaa
ggaactctcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaatttgctaaacacatgaaactcaa
gaagaacgaagaccaaagtgtggacactttgccccttctttccatcagaa
attagcattcccaagtgaaactatcatgggaaacttcaggaaatgaaaca
aaacaaacaagcaaacaaacaaacaggagaattgaaaatatgcagttgag
gggaaccctgatgtatttttcctagtaggttctcagttcttttcctattg
aggagattgctgagtagataatgaagccatcactgtattttctcagctgc
agaaaagatacctaaaggaggacgttctgtaatttggacagaaatgaaat
ctactgataccctaccaatacaa
gaattctaagtatgtataaattatgaaaccaatgaatagatgaagaaaaa
aattctaggttagaggaggataagaaagatgatactgtgcatgacaaagt
attaatctggatcggatctcaaatacaggaaaaaacattataaaagacat
aattggaataactggcaaaatttggatctggacatttatattgctctttt
tggtaggtgttttgggatatgttcagagtctttatccctaggaagcatac
attacactgaaggagtttggataaagggacactacttctgaaataactct
caaatgattcagggaaaaatacagagtaagtagagggtacagcaaatgga
actgtatgttaattacagataactctgcatataaagaggcagagttattc
tagatacttatggttttttgtttgtttgtttttttggttggtttttgaga
cagagtttccatgtagccttgggtattagtgggcttagaacttactatgt
agaccaggcctggcctctgtcactcaagagccggggttaaagccatacac
caccatacctagccagtgaactatttatgaaacttctctataaatgtaaa
acaaacaattctaccatgctctggtctaaccatcagtaaaggggatacag
ttaacagaggggctaggtaaatcaatgatacagttacagccttggttggg
tgagtttgaaggcttcatgacctgcatttttctctactaaaaagtaattg
aggattgacttcactaagtgctaattatgtttttttgctgtcctccatac
attaacatttgtgaggtgatttttgtgggataaatatatgttgtaagatc
aatgaacagcttgtgatctatggtttggattgtaaattggggtcttttgt
tggaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053463_104054363
seq2: B6Ng01-156A02.b_43_732 (reverse)

seq1  AAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTC-TCTTGAGTTTAA  49
      ||||||||||||||||||||||||||||||||||||| |||||||||| |
seq2  AAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCA  50

seq1  TGTGTTTAGCAAATTGTATCTTATATCTTGGGTATCCTAAGTTTCTGGGC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTAGCAAATTGTATCTTATATCTTGGGTATCCTAAGTTTCTGGGC  100

seq1  TAATATCCACTTATCAGTGAGTACATATTGCGCGAGTTCCTTTGTGATTG  149
      |||||||||||||||||||||||||||||| | |||||||||||||||||
seq2  TAATATCCACTTATCAGTGAGTACATATTGTGAGAGTTCCTTTGTGATTG  150

seq1  GGTTACCGCACTCAGGATGATACTCTCCAGGTCCATCCATTTGCCTAGGA  199
       ||| || ||||||||||||| | ||||||||||| ||||||||||||||
seq2  TGTTGCCACACTCAGGATGATGCCCTCCAGGTCCAACCATTTGCCTAGGA  200

seq1  ATTTCATAAATTCATTCTTTTTAATAGCTCCATTTACATTTAATTTAATT  249
      ||||||||||||||||||||||||||||                      
seq2  ATTTCATAAATTCATTCTTTTTAATAGC----------------------  228

seq1  AATGTAATTACAATTAATTAATTTATTAATTAAATAATTTAATAATTTAA  299
                                                        
seq2  --------------------------------------------------  228

seq1  TTGATAAATTAATTTAATTAATTAATTTAATTAATTAAATTAAATAATAA  349
                                                        
seq2  --------------------------------------------------  228

seq1  TTTAATAATAAATTAAATATTTTAAAATTAATAATAATTTTATAAGTAAA  399
                                                | ||||  
seq2  ------------------------------------------TGAGTA--  234

seq1  TAATTTAATTAATGTAATTTAATTAATGTAATTACATTACATTTAATAGC  449
                                 |||                   |
seq2  ---------------------------GTA-------------------C  238

seq1  TCCATTGTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGGG  499
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCCATTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGG  288

seq1  GCATCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATGA  549
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGA  338

seq1  ATATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATAT  599
      | |||||||||||||||||||||||||| |||||  ||||||||||||||
seq2  ACATAGTGGAGCATGTGTCCTTCTTACCAGTTGGAACATCTTCTGGATAT  388

seq1  ATGCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTT  649
      |||||||| | |||||||||||||||||| ||||||||||||||||||||
seq2  ATGCCCAGGAAAGGTATTGCTGGATCCTCTGGTAGTACTATGTCCAATTT  438

seq1  TCTGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAAT  699
      ||||| |||||||||||| ||||||||||||||||||| |||| ||||||
seq2  TCTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTATAAGCTTGCAAT  488

seq1  CCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCAT  749
      |||||||||||||||||| |||||||||||||||||||||||||| ||||
seq2  CCCACCAACAATGGAGGATTGTTCCTCTTTCTCCACATCCTCGCCTGCAT  538

seq1  CTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTG  799
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTG  588

seq1  GAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGCTG  638

seq1  AACATTTTTTCAGGTGCTTCTCTGC-CATTCGGTATTCCTCAGGTGAGAA  898
      |||| ||||||||||| ||||||||  ||||||||||||| |||||||||
seq2  AACA-TTTTTCAGGTGTTTCTCTGCGGATTCGGTATTCCTTAGGTGAGAA  687

seq1  TTC  901
      |||
seq2  TTC  690

seq1: chr10_44263983_44264885
seq2: B6Ng01-156A02.g_69_975

seq1  GAATTCTAAGTATGTATAAATTATGAAACCAATGAATAGATGAAGAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGTATGTATAAATTATGAAACCAATGAATAGATGAAGAAAAA  50

seq1  AATTCTAGGTTAGAGGAGGATAAGAAAGATGATACTGTGCATGACAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAGGTTAGAGGAGGATAAGAAAGATGATACTGTGCATGACAAAGT  100

seq1  ATTAATCTGGATCGGATCTCAAATACAGGAAAAAACATTATAAAAGACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCTGGATCGGATCTCAAATACAGGAAAAAACATTATAAAAGACAT  150

seq1  AATTGGAATAACTGGCAAAATTTGGATCTGGACATTTATATTGCTCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGAATAACTGGCAAAATTTGGATCTGGACATTTATATTGCTCTTTT  200

seq1  TGGTAGGTGTTTTGGGATATGTTCAGAGTCTTTATCCCTAGGAAGCATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGGTGTTTTGGGATATGTTCAGAGTCTTTATCCCTAGGAAGCATAC  250

seq1  ATTACACTGAAGGAGTTTGGATAAAGGGACACTACTTCTGAAATAACTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACTGAAGGAGTTTGGATAAAGGGACACTACTTCTGAAATAACTCT  300

seq1  CAAATGATTCAGGGAAAAATACAGAGTAAGTAGAGGGTACAGCAAATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGATTCAGGGAAAAATACAGAGTAAGTAGAGGGTACAGCAAATGGA  350

seq1  ACTGTATGTTAATTACAGATAACTCTGCATATAAAGAGGCAGAGTTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATGTTAATTACAGATAACTCTGCATATAAAGAGGCAGAGTTATTC  400

seq1  TAGATACTTATGGTTTTTTGTTTGTTTGTTTTTTTGGTTGGTTTTTGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATACTTATGGTTTTTTGTTTGTTTGTTTTTTTGGTTGGTTTTTGAGA  450

seq1  CAGAGTTTCCATGTAGCCTTGGGTATTAGTGGGCTTAGAACTTACTATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTTCCATGTAGCCTTGGGTATTAGTGGGCTTAGAACTTACTATGT  500

seq1  AGACCAGGCCTGGCCTCTGTCACTCAAGAGCCGGGGTTAAAGCCATACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGGCCTGGCCTCTGTCACTCAAGAGCCGGGGTTAAAGCCATACAC  550

seq1  CACCATACCTAGCCAGTGAACTATTTATGAAACTTCTCTATAAATGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATACCTAGCCAGTGAACTATTTATGAAACTTCTCTATAAATGTAAA  600

seq1  ACAAACAATTCTACCATGCTCTGGTCTAACCATCAGTAAAGGGGATACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAATTCTACCATGCTCTGGTCTAACCATCAGTAAAGGGGATACAG  650

seq1  TTAACAGAGGGGCTAGGTAAATCAATGATACAG-TACAGCCTTGGTTGGG  699
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTAACAGAGGGGCTAGGTAAATCAATGATACAGTTACAGCCTTGGTTGGG  700

seq1  TGAG-TTGAAGGCTTCATGACCTGCA-TTTTCTCTACTAAAAAGTAATTG  747
      |||| ||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGAGTTTGAAGGCTTCATGACCTGCATTTTTCTCTACTAAAAAGTAATTG  750

seq1  AGGATTGACTTCACTAAGTGCTAAATTATG-TTTTTTGCTGTCCTCCATA  796
      |||||||||||||||||||||| ||||||| |||||||||||||||||||
seq2  AGGATTGACTTCACTAAGTGCT-AATTATGTTTTTTTGCTGTCCTCCATA  799

seq1  CATTAACATTTGTGAGGTGATTTTTGTGGTATAAATATATGTTGTAAGAT  846
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CATTAACATTTGTGAGGTGATTTTTGTGGGATAAATATATGTTGTAAGAT  849

seq1  CAATGAACAGCTTTTGATCTATGGTTTGTATTGTAAATT-GGGTCTTTTG  895
      ||||||||||||| |||||||||||||| |||||||||| ||||||||||
seq2  CAATGAACAGCTTGTGATCTATGGTTTGGATTGTAAATTGGGGTCTTTTG  899

seq1  TTGGAAGT  903
      |||||| |
seq2  TTGGAATT  907