BAC Information

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BAC

Clone NameB6Ng01-156C15
Chromosome8 (Build37)10 (Build37)
Map Location 130,951,316 - 130,952,45924,712,428 - 24,713,321
singlet/doubletsingletsinglet
Overlap geneNrp1
Upstream genePard3, EG628847
Downstream geneLOC668494, Itgb1, LOC100042659, LOC100042667, Ccdc7, 1700008F21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156C15.bB6Ng01-156C15.g
ACCDH950740DH950741
length1,140951
definitionDH950740|Mus musculus domesticus DNA, BAC clone: B6Ng01-156C15, 5' end.DH950741|Mus musculus domesticus DNA, BAC clone: B6Ng01-156C15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(130,951,316 - 130,952,459)(24,712,428 - 24,713,321)
sequence
gaattccaggcatgcattgccacacctggtttatgccatgctggggattg
aacccagggctttatgaacactagacaagcactaaatcaactgagctata
ttcgctacacaaaaactgtatgtttgtatgtttgttcatagttacctggc
cttatccagtcaacaccagcacagttctagcttcctctcttctagggaaa
ataggaactgaccctcctggatttttttggttagtggagttagaaacatt
tttgtcatggtagttcaaaactcataactcccaatagattttttagtttc
tggtatcttttccagaaacaatatccaaaatgtgtagaaggcttttagtc
attgtatgaccttatgttctaacttatcataaacatcattaaatgactaa
gtaattgaaagctatcaattgactcaaattgactttgaagaaaagcagtc
tactctaaaactctgaattcaaggcatgcaggttgggaatcacatgtctc
catttctcattctctggaagcttggtggatccacaagttctcaagggatt
ggtacagagagtcaacctgtctctgcaaaggatactatatatttgtgtgg
aatggacaatggaaccagggaatgatgagctcacaccactgttgtgcctt
ctctgctggagctgggaagaacgatcagaacttagatgtcactgacattg
cagaagtgattagcagaatcaagaatgattttcttgagagttagatgaat
gctattgttttttattgacttttacatttaaagtagcctagtaagacaat
gatagaaataaatgtgcaaactctagagattctctactgatttgctgaat
acattatgaatagttaagtggcctggctagtgcctatgaaatgattcctt
ttctgatgtattaacattatctcactctaaaagtacctctttagatgggc
atagtcttatatatataatcccagaacttggaaggcttaagtagattact
gagttcaaggttcatgcaggcaatacagcaagtaccaggctatcttcaaa
aatgaaaacaggaacaataggaaacaaggacttttcttttttgcttttct
tctataagagaaggaggacttacatttattttcagtctga
gaattcacttcttaatgcttttcctgaatgtttctcactgtttctctgac
acatgtgtggacgcccgactcgccagcaaggaagacgccacaacaggatt
cttctgcacacgtttattgggagagcttgatagagaaggcgaaagacccc
aagccccagaactggcactgcttatataggcctaggagtggcatgtctat
acctgattggttgtgctttcagtacctcatttacattccccgggatgggc
tgtgatgtggagcgaaacccttatgcacatgtgcacattggttgtttacc
cgaacttatgggcggtggccagcggtagccagcgccatcttgtaatggtg
taagtggcttttcacatctccctcttttttattattatggcctaatccaa
cgatctagttgctagcctcttcagctcgcaacaatcaagaaggatctcat
ttttggcagaccatgatcaccctatcgcgtgcaatgggcttagcctcagt
gatgtgcaagggctgatcaaggaaatcgagtcttactcatcccagtgcaa
tgggtacacagactcgtggggtgctagagctaaggactcgaatgcctatt
atttatgtagcatgaatacttcagaggaggccccttgttcaatggccatg
agtgcttgggtgatggccaccttgtcacgtttctgttgagatctgaactt
gcaaaccaaccaaagcatgaataccaatccacagcatatggcatcgccaa
aaagaacaactcccacccactccttaaagtaggaaaatgcagaagtaagc
caagaggtaaaatcgccaacagtgatgggttctattcgagttccattaag
gcttaaaaatctggcattagatgtaaagaattgaggaaacacttgaatgc
gtcaacggcatgattttcaggaacacagagctcttcagttctcactagcg
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_130951316_130952459
seq2: B6Ng01-156C15.b_44_1183

seq1  GAATTCCAGGCATGCATTGCCACACCTGGTTTATGCCATGCTGGGGATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCATGCATTGCCACACCTGGTTTATGCCATGCTGGGGATTG  50

seq1  AACCCAGGGCTTTATGAACACTAGACAAGCACTAAATCAACTGAGCTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGGGCTTTATGAACACTAGACAAGCACTAAATCAACTGAGCTATA  100

seq1  TTCGCTACACAAAAACTGTATGTTTGTATGTTTGTTCATAGTTACCTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCTACACAAAAACTGTATGTTTGTATGTTTGTTCATAGTTACCTGGC  150

seq1  CTTATCCAGTCAACACCAGCACAGTTCTAGCTTCCTCTCTTCTAGGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCCAGTCAACACCAGCACAGTTCTAGCTTCCTCTCTTCTAGGGAAA  200

seq1  ATAGGAACTGACCCTCCTGGATTTTTTTGGTTAGTGGAGTTAGAAACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAACTGACCCTCCTGGATTTTTTTGGTTAGTGGAGTTAGAAACATT  250

seq1  TTTGTCATGGTAGTTCAAAACTCATAACTCCCAATAGATTTTTTAGTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCATGGTAGTTCAAAACTCATAACTCCCAATAGATTTTTTAGTTTC  300

seq1  TGGTATCTTTTCCAGAAACAATATCCAAAATGTGTAGAAGGCTTTTAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATCTTTTCCAGAAACAATATCCAAAATGTGTAGAAGGCTTTTAGTC  350

seq1  ATTGTATGACCTTATGTTCTAACTTATCATAAACATCATTAAATGACTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATGACCTTATGTTCTAACTTATCATAAACATCATTAAATGACTAA  400

seq1  GTAATTGAAAGCTATCAATTGACTCAAATTGACTTTGAAGAAAAGCAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGAAAGCTATCAATTGACTCAAATTGACTTTGAAGAAAAGCAGTC  450

seq1  TACTCTAAAACTCTGAATTCAAGGCATGCAGGTTGGGAATCACATGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTAAAACTCTGAATTCAAGGCATGCAGGTTGGGAATCACATGTCTC  500

seq1  CATTTCTCATTCTCTGGAAGCTTGGTGGATCCACAAGTTCTCAAGGGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTCATTCTCTGGAAGCTTGGTGGATCCACAAGTTCTCAAGGGATT  550

seq1  GGTACAGAGAGTCAACCTGTCTCTGCAAAGGATACTATATATTTGTGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAGAGAGTCAACCTGTCTCTGCAAAGGATACTATATATTTGTGTGG  600

seq1  AATGGACAATGGAACCAGGGAATGATGAGCTCACACCACTGTTGTGCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACAATGGAACCAGGGAATGATGAGCTCACACCACTGTTGTGCCTT  650

seq1  CTCTGCTGGAGCTGGGAAGAACGATCAGAACTTAGATGTCACTGACATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTGGAGCTGGGAAGAACGATCAGAACTTAGATGTCACTGACATTG  700

seq1  CAGAAGTGATTAGCAGAATCAAGAATGATTTTCTTGAGAGTTAGATGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTGATTAGCAGAATCAAGAATGATTTTCTTGAGAGTTAGATGAAT  750

seq1  GCTATTGTTTTTTATTGACTTTTACATTTAAAGTAGCCTAGTAAGACAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTGTTTTTTATTGACTTTTACATTTAAAGTAGCCTAGTAAGACAAT  800

seq1  GATAGAAATAAATGTGCAAACTCTAGAGATTCTCTACTGATTTGCTGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAAATAAATGTGCAAACTCTAGAGATTCTCTACTGATTTGCTGAAT  850

seq1  ACATTATGAATAGTTAAGTGGCCTGGCTAGTGCCTATGAAATGATTCC-T  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACATTATGAATAGTTAAGTGGCCTGGCTAGTGCCTATGAAATGATTCCTT  900

seq1  TTCTGATGTATTAACATTATCTCACTCTAAAAGTACCTCTTTAGATGGGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATGTATTAACATTATCTCACTCTAAAAGTACCTCTTTAGATGGGC  950

seq1  ATAGTCTTATATATATAATCCCAGAACTTGGAAGGCTTAAGTAAGATTAC  999
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATAGTCTTATATATATAATCCCAGAACTTGGAAGGCTTAAGT-AGATTAC  999

seq1  TGAGTTCAAGGTTCATGCAGGCAATACAGCAAGTACCAGGCTATCTCAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||  ||
seq2  TGAGTTCAAGGTTCATGCAGGCAATACAGCAAGTACCAGGCTATCTTCAA  1049

seq1  AAATGAAAACAAAGAAACAAATAAGAAACAAAGACTTTTCTTTTTTTGCT  1099
      ||||||||||  || ||| |||| ||||||| |||||||| |||||||||
seq2  AAATGAAAAC--AGGAAC-AATAGGAAACAAGGACTTTTC-TTTTTTGCT  1095

seq1  TTTCTTCATATAAGAAGACAGAAGAC-TACA-TTATTTTCAGTCTGA  1144
      ||||||| |||||| |||  || ||| |||| |||||||||||||||
seq2  TTTCTTC-TATAAG-AGAAGGAGGACTTACATTTATTTTCAGTCTGA  1140

seq1: chr10_24712428_24713321
seq2: B6Ng01-156C15.g_122_1010

seq1  GTGTGGACGCCCGACTCACCAGCAAGGAAGAAGCCACAACAGGATTCTTC  50
      ||||||||||||||||| ||||||||||||| ||||||||||||||||||
seq2  GTGTGGACGCCCGACTCGCCAGCAAGGAAGACGCCACAACAGGATTCTTC  50

seq1  TGCACACGTTTATTGGGAGAGCTTGATAGAGAAGGCGAAAGACCCCGAGC  100
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGCACACGTTTATTGGGAGAGCTTGATAGAGAAGGCGAAAGACCCCAAGC  100

seq1  CCCAGAACTGGCACTGCTTATATAGGCCTAGGAGTGGCGTGTCTATACCT  150
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCCAGAACTGGCACTGCTTATATAGGCCTAGGAGTGGCATGTCTATACCT  150

seq1  GATTGGTTGTGCTTTCAGTACCTCATTTACATTCTCCGGGATGGGCTGTG  200
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GATTGGTTGTGCTTTCAGTACCTCATTTACATTCCCCGGGATGGGCTGTG  200

seq1  ACGTGGTGCGAAACCCTTATGCACATGCACACATTGGGTTGTTTACCCGA  250
      | |||| ||||||||||||||||||||  |||||| ||||||||||||||
seq2  ATGTGGAGCGAAACCCTTATGCACATGTGCACATT-GGTTGTTTACCCGA  249

seq1  ACTTATGGGCGGTGGCCAGTGGTAGCCAGCGCCATCTTGTAATGGCATAT  300
      ||||||||||||||||||| |||||||||||||||||||||||||  || 
seq2  ACTTATGGGCGGTGGCCAGCGGTAGCCAGCGCCATCTTGTAATGGTGTAA  299

seq1  GTGGCTTCCCACATCTCCCCCTTTATTATTATTATGGCCTAATCCAACTA  350
      |||||||  |||||||||| |||| ||||||||||||||||||||||| |
seq2  GTGGCTTTTCACATCTCCCTCTTTTTTATTATTATGGCCTAATCCAACGA  349

seq1  TCTAGTCGCTAGCCTCTTCAGCTCGCAACGATCAAGAAGGATCTCGTTTT  400
      |||||| |||||||||||||||||||||| ||||||||||||||| ||||
seq2  TCTAGTTGCTAGCCTCTTCAGCTCGCAACAATCAAGAAGGATCTCATTTT  399

seq1  TGGCAGACCATGATCACCCTATCTCATGCAATGGGCATAGTCTCAGCAAT  450
      ||||||||||||||||||||||| | |||||||||| ||| |||||  ||
seq2  TGGCAGACCATGATCACCCTATCGCGTGCAATGGGCTTAGCCTCAGTGAT  449

seq1  GTGCAAGGGCTGATCAAGGAAAT-GAGTCTTACTCATCCCAGTGCAATGG  499
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTGCAAGGGCTGATCAAGGAAATCGAGTCTTACTCATCCCAGTGCAATGG  499

seq1  GTACACAGACCCGTGGGGTGCTTGAGCTAAGGACTCGAATGCCTATTATT  549
      |||||||||| ||||||||||| |||||||||||||||||||||||||||
seq2  GTACACAGACTCGTGGGGTGCTAGAGCTAAGGACTCGAATGCCTATTATT  549

seq1  TATGTAGCATGGATAACTATACTTCAGAGGAGGCCCCTTGTTCAATGGCC  599
      |||||||||||       ||||||||||||||||||||||||||||||||
seq2  TATGTAGCATG------AATACTTCAGAGGAGGCCCCTTGTTCAATGGCC  593

seq1  ATGAGTGCTTGGGTGATGGTCACCTTGTCACGTTTCTGTTGAGATCTGAA  649
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATGAGTGCTTGGGTGATGGCCACCTTGTCACGTTTCTGTTGAGATCTGAA  643

seq1  CTTGCAAACCAACCAAAGCATGAATACCAATCCACAGCATCTGGCAGCGC  699
      |||||||||||||||||||||||||||||||||||||||| ||||| |||
seq2  CTTGCAAACCAACCAAAGCATGAATACCAATCCACAGCATATGGCATCGC  693

seq1  CAAAAAGAACAACTCCCACCCACTCCTTAAAGGAGGAAAATGCAGAGGTA  749
      |||||||||||||||||||||||||||||||| ||||||||||||| |||
seq2  CAAAAAGAACAACTCCCACCCACTCCTTAAAGTAGGAAAATGCAGAAGTA  743

seq1  AGCCAAGAGGTAAAATCACCAACAGTGATGGGTTCTATTCAAGTTCCATT  799
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  AGCCAAGAGGTAAAATCGCCAACAGTGATGGGTTCTATTCGAGTTCCATT  793

seq1  AAGGCTT-AAAATCTGGCATTAGATGTAAAGAATTGAGGAAACACTTGAA  848
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTAAAAATCTGGCATTAGATGTAAAGAATTGAGGAAACACTTGAA  843

seq1  TGTGTCAATGGCATGGTTTTCAGGAACACAGAGCTCTTCAGTTCTC  894
      || ||||| |||||| ||||||||||||||||||||||||||||||
seq2  TGCGTCAACGGCATGATTTTCAGGAACACAGAGCTCTTCAGTTCTC  889